BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,799,569	G→A	N342N (AAC→AAT)	thrS ←	threonine tRNA synthetase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,799,569	0	G	A	100.0%	464.7 / NA	134	N342N (AAC→AAT)	thrS	threonine tRNA synthetase
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (62/72); total (62/72)

Only 100 of 137 total aligned reads displayed.

GCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTA  >  NC_000913/1799479‑1799658

gCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGAtt                                                                                         <  2:3048275/93‑1 (MQ=255)

gCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGAtt                                                                                         <  1:490639/93‑1 (MQ=255)

gCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGAtt                                                                                         >  2:1877197/1‑93 (MQ=255)

  cATGCAGCGAACCTGACGGCTCGTTACGGGGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGa                                                                                       >  1:327230/1‑93 (MQ=255)

   aTGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGaa                                                                                      >  1:3624784/1‑93 (MQ=255)

      cAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATATGACTTCAGCCCCTGATTGAAAAt                                                                                   >  2:2599222/1‑93 (MQ=255)

       aGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAAtt                                                                                  >  2:4574347/1‑93 (MQ=255)

        gCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAAttt                                                                                 <  2:2643191/93‑1 (MQ=255)

        gCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAAttt                                                                                 <  2:491977/93‑1 (MQ=255)

        gCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAAttt                                                                                 >  2:463568/1‑93 (MQ=255)

           aaCCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTa                                                                              <  2:2629514/93‑1 (MQ=255)

           aaCCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTa                                                                              <  1:1622775/93‑1 (MQ=255)

           aaCCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTa                                                                              <  2:3410436/93‑1 (MQ=255)

           aaCCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGAAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTa                                                                              <  1:2567889/93‑1 (MQ=255)

            aCCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTAc                                                                             >  2:4548847/1‑93 (MQ=255)

             ccTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACg                                                                            >  1:127719/1‑93 (MQ=255)

             ccTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACg                                                                            >  1:1259751/1‑93 (MQ=255)

                gACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGa                                                                         >  1:4416818/1‑93 (MQ=255)

                 aCGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGAc                                                                        <  2:643879/93‑1 (MQ=255)

                   ggCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGAccc                                                                      >  1:4256815/1‑93 (MQ=255)

                    gCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCg                                                                     <  1:2705523/93‑1 (MQ=255)

                     cTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCgg                                                                    <  2:1356068/93‑1 (MQ=255)

                     cTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCgg                                                                    >  1:458836/1‑93 (MQ=255)

                           aCGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGtt                                                              <  2:3255569/93‑1 (MQ=255)

                            cGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTc                                                             <  1:1379169/93‑1 (MQ=255)

                             ggTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCa                                                            <  1:3411472/93‑1 (MQ=255)

                               gggCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGCCTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATc                                                          <  2:338469/92‑1 (MQ=255)

                                ggCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCg                                                         >  2:3726588/1‑93 (MQ=255)

                                 gCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCgg                                                        <  1:2366738/93‑1 (MQ=255)

                                  cAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGc                                                       <  1:2127049/93‑1 (MQ=255)

                                   aGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCt                                                      >  2:2183141/1‑93 (MQ=255)

                                   aGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCt                                                      <  1:4162543/93‑1 (MQ=255)

                                    gCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCtt                                                     <  1:1550174/93‑1 (MQ=255)

                                     cTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTa                                                    >  2:4091332/1‑93 (MQ=255)

                                     cTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTa                                                    <  2:1247757/93‑1 (MQ=255)

                                      tACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTaa                                                   <  1:4471898/93‑1 (MQ=255)

                                      tACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTaa                                                   <  2:1274268/93‑1 (MQ=255)

                                       aCCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAAt                                                  >  1:1359946/1‑93 (MQ=255)

                                       aCCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAAt                                                  <  1:995754/93‑1 (MQ=255)

                                          aaaCTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCa                                               >  2:937755/1‑93 (MQ=255)

                                          aaaCTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCa                                               >  1:2119097/1‑93 (MQ=255)

                                           aaCTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAg                                              <  2:2540429/93‑1 (MQ=255)

                                           aaCTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAg                                              <  2:2499105/93‑1 (MQ=255)

                                           aaCTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAg                                              >  2:4411207/1‑93 (MQ=255)

                                             cTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTa                                            <  1:3360187/93‑1 (MQ=255)

                                              tCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTAt                                           <  1:358020/93‑1 (MQ=255)

                                                ggCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTc                                         <  2:3462191/93‑1 (MQ=255)

                                                  ccATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCAc                                       <  1:3941594/93‑1 (MQ=255)

                                                  ccATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCAc                                       <  2:3878600/93‑1 (MQ=255)

                                                  ccATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCAc                                       <  2:4285691/93‑1 (MQ=255)

                                                   cATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACg                                      <  2:4512762/93‑1 (MQ=255)

                                                   cATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTAATCGGCTTAATGCAGTATTCACg                                      >  1:1188066/1‑93 (MQ=255)

                                                    aTACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACgg                                     >  2:26520/1‑93 (MQ=255)

                                                    aTACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACgg                                     >  1:1941224/1‑93 (MQ=255)

                                                    aTACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACgg                                     <  2:4543754/93‑1 (MQ=255)

                                                     tACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGt                                    >  2:136518/1‑93 (MQ=255)

                                                      aCGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTCCGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGtt                                   <  1:1616809/93‑1 (MQ=255)

                                                        gCNGCGGCAGATCGCGATAAGNNTTNAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTtct                                 <  1:696877/93‑1 (MQ=255)

                                                        gCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTtct                                 >  2:2804176/1‑93 (MQ=255)

                                                        gCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTtct                                 <  2:54412/93‑1 (MQ=255)

                                                         cAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTtctc                                >  1:451651/1‑93 (MQ=255)

                                                          aGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACTCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCa                               <  2:366023/93‑1 (MQ=255)

                                                            cGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCaga                             <  1:482722/93‑1 (MQ=255)

                                                            cGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCaga                             >  2:1520804/1‑93 (MQ=255)

                                                             ggCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCagaa                            >  1:515627/1‑93 (MQ=255)

                                                             ggCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCagaa                            <  2:1246117/93‑1 (MQ=255)

                                                                aGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGTCTTAATGCAGTATTCAAGGTTCTCagaagag                         >  1:3948065/1‑92 (MQ=255)

                                                                aGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGAt                         <  2:4480681/93‑1 (MQ=255)

                                                                aGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGAt                         >  1:3948066/1‑93 (MQ=255)

                                                                 gATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCGCGGTTCTCAGAAGAtg                        >  1:1738011/1‑93 (MQ=255)

                                                                 gATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGAtg                        >  2:3744610/1‑93 (MQ=255)

                                                                 gATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGAtg                        >  2:25474/1‑93 (MQ=255)

                                                                  aTCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGAtgt                       <  2:876076/93‑1 (MQ=255)

                                                                  aTCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGAtgt                       <  2:836086/93‑1 (MQ=255)

                                                                  aTCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGAtgt                       >  1:196868/1‑93 (MQ=255)

                                                                   tCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGAtgtg                      <  1:3096884/93‑1 (MQ=255)

                                                                    cgcgATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATgtgg                     <  1:2815787/93‑1 (MQ=255)

                                                                     gcgATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATgtggt                    <  1:4477437/93‑1 (MQ=255)

                                                                     gcgATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATgtggt                    <  1:3001627/93‑1 (MQ=255)

                                                                        aTAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGaa                 >  2:3170872/1‑93 (MQ=255)

                                                                        aTAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGaa                 >  1:297177/1‑93 (MQ=255)

                                                                           aGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACAt              >  1:539695/1‑93 (MQ=255)

                                                                           aGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACAt              >  2:2017173/1‑93 (MQ=255)

                                                                            gACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACAtt             <  1:1264455/93‑1 (MQ=255)

                                                                            gACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACAtt             >  1:200634/1‑93 (MQ=255)

                                                                             aCTTAAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGATCATCGGCTTCATGCAGTATTCACGGTCCTCAGAAGATGTGGTGAACAATg            >  2:2586442/1‑93 (MQ=255)

                                                                               ttCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCa          >  2:4137876/1‑93 (MQ=255)

                                                                               ttCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCa          <  1:4635096/93‑1 (MQ=255)

                                                                                 cAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATc        >  2:2209731/1‑93 (MQ=255)

                                                                                 cAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATc        <  2:1010268/93‑1 (MQ=255)

                                                                                   gCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCtt      >  2:3911393/1‑93 (MQ=255)

                                                                                   gCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCtt      >  1:579041/1‑93 (MQ=255)

                                                                                   gCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCtt      >  2:685553/1‑93 (MQ=255)

                                                                                   gCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCtt      >  1:2115730/1‑93 (MQ=255)

                                                                                    ccccTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCttt     <  2:4453707/93‑1 (MQ=255)

                                                                                    ccccTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCttt     <  2:3350015/93‑1 (MQ=255)

                                                                                      ccTGATTGAATATTTGTACGTGACCCGGGCAGTGCATTGGCGTAATGCAGTATTCACGCTGCTCAGGAGATGTGGTGAACATTGCATCTTTGt   <  2:3927549/93‑1 (MQ=255)

                                                                                      ccTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGt   >  1:2499797/1‑93 (MQ=255)

                                                                                       cTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTa  <  1:185788/93‑1 (MQ=255)

                                                                                       cTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTa  >  2:2188221/1‑93 (MQ=255)

GCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTA  >  NC_000913/1799479‑1799658

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`