BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,854,076	T→C	S293G (AGC→GGC)	b1772 ←	putative kinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,854,076	0	T	C	96.0%	447.3 / 6.4	150	S293G (AGC→GGC)	b1772	putative kinase
Reads supporting (aligned to +/- strand): ref base T (2/4); new base C (75/69); total (77/73)
Fisher's exact test for biased strand distribution p-value = 4.33e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.87e-01

Only 100 of 156 total aligned reads displayed.

TCTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCTTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGAAGC  >  NC_000913/1853986‑1854166

tCTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTa                                                                                          >  1:1197039/1‑93 (MQ=255)

tCTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTa                                                                                          <  2:557384/93‑1 (MQ=255)

 cTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAg                                                                                         <  1:2685514/93‑1 (MQ=255)

 cTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAg                                                                                         <  2:1642312/93‑1 (MQ=255)

  tttttCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGa                                                                                        >  2:3187753/1‑93 (MQ=255)

  tttttCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGa                                                                                        >  2:4331066/1‑93 (MQ=255)

  tttttCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGa                                                                                        >  1:3322795/1‑93 (MQ=255)

    ttttATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAAc                                                                                      <  1:1436320/93‑1 (MQ=255)

    tttCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAAc                                                                                      <  1:2996907/93‑1 (MQ=255)

     ttCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAAcc                                                                                     <  1:3567828/93‑1 (MQ=255)

        aTTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCgag                                                                                  >  1:2448222/1‑93 (MQ=255)

        aTTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCgag                                                                                  >  2:3934747/1‑93 (MQ=255)

         tttGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCgaga                                                                                 <  2:3716468/93‑1 (MQ=255)

          ttGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGAt                                                                                <  2:2021803/93‑1 (MQ=255)

            gCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAg                                                                              >  2:3548476/1‑93 (MQ=255)

             ccTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAgc                                                                             <  1:2919509/93‑1 (MQ=255)

              cTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAgcc                                                                            <  1:1704604/93‑1 (MQ=255)

              cTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAgcc                                                                            >  2:894920/1‑93 (MQ=255)

              cTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAgcc                                                                            <  1:2911023/93‑1 (MQ=255)

                tCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAgccgc                                                                          <  2:2018580/93‑1 (MQ=255)

                   ttATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGt                                                                       >  2:2881617/1‑93 (MQ=255)

                   ttATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGt                                                                       >  1:925988/1‑93 (MQ=255)

                   ttATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGt                                                                       >  1:1672632/1‑93 (MQ=255)

                   ttATCCTTCGTATTCTTCCAGCAATAGTTCGACCAGCGTTCTGTTTTTTACTCCGGGGGCGGCACCGACGCCTAGAACCGAGATAGccgccgg                                                                       >  2:4214073/1‑92 (MQ=255)

                     aTCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTg                                                                     <  1:3501311/93‑1 (MQ=255)

                     aTCCTTCGTATTCTTCCAGCAATTGCTAGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGACATAGCCCGCGTTg                                                                     >  2:3574895/1‑93 (MQ=255)

                       ccTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCa                                                                   >  2:3904836/1‑93 (MQ=255)

                        cTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCAt                                                                  >  1:1054663/1‑93 (MQ=255)

                         ttCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCAtt                                                                 <  1:1871338/93‑1 (MQ=255)

                          tCGTATTCTTCCAGCAATTGTTCGCCCAGCTTTCTGTTTTTTGCGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTg                                                                <  1:1822787/93‑1 (MQ=255)

                          tCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCTTAGAACCGAGATAGCCGCCGTTGCATTg                                                                <  1:4016878/93‑1 (MQ=255)

                           cGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTgg                                                               <  2:2449705/93‑1 (MQ=255)

                               ttcttcCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCaaa                                                           <  2:927576/93‑1 (MQ=255)

                                  ttcCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCg                                                        >  2:3691867/1‑93 (MQ=255)

                                   tcCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGt                                                       <  1:1726577/93‑1 (MQ=255)

                                    ccAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTg                                                      >  2:318669/1‑93 (MQ=255)

                                    ccAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTg                                                      <  1:1787545/93‑1 (MQ=255)

                                     cAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTgc                                                     <  1:4003444/93‑1 (MQ=255)

                                     cAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTgc                                                     >  2:3508979/1‑93 (MQ=255)

                                       gCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTgcgc                                                   <  2:2091462/93‑1 (MQ=255)

                                        cAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCa                                                  <  2:2706214/93‑1 (MQ=255)

                                        cAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCa                                                  <  2:562716/93‑1 (MQ=255)

                                         aaTTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCAt                                                 >  1:4573437/1‑93 (MQ=255)

                                         aaTTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCAt                                                 <  2:1763499/93‑1 (MQ=255)

                                         aaTTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCAt                                                 >  2:4059817/1‑93 (MQ=255)

                                         aaTTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCAt                                                 >  1:4329370/1‑93 (MQ=255)

                                          aTTGTTCGCCCGGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGACCCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCAtt                                                <  2:121107/93‑1 (MQ=255)

                                          aTTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCAtt                                                >  1:4145057/1‑93 (MQ=255)

                                           gtGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCAGTGGCAAAGCGTGCGCATTc                                               >  2:4222182/2‑93 (MQ=255)

                                            tGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCa                                              <  1:4451284/93‑1 (MQ=255)

                                             gTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCAc                                             <  1:2217351/93‑1 (MQ=255)

                                               tCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGc                                           <  2:1344931/93‑1 (MQ=255)

                                                cGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCa                                          >  2:4196109/1‑93 (MQ=255)

                                                 gACCCGGTTTCTGAGTTTTACGCCTGTGGTGGCAGCGACGCCCAGAACCGAGATCGCAGCAGTTGCATTGGCAAAGCGTGCGCATTCACGCAg                                         >  2:2840606/1‑93 (MQ=255)

                                                 gACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAg                                         >  1:1958282/1‑93 (MQ=255)

                                                 gACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAg                                         >  1:688567/1‑93 (MQ=255)

                                                  aCCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGa                                        >  1:3916457/1‑93 (MQ=255)

                                                  aCCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGa                                        >  1:491970/1‑93 (MQ=255)

                                                    cAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAtt                                      <  2:3529188/93‑1 (MQ=255)

                                                    cAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAtt                                      <  2:3033242/93‑1 (MQ=255)

                                                    cAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAtt                                      >  1:1013072/1‑93 (MQ=255)

                                                     aGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAttt                                     >  2:2408007/1‑93 (MQ=255)

                                                     aGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAttt                                     >  1:3700050/1‑93 (MQ=255)

                                                     aGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAttt                                     >  1:4241953/1‑93 (MQ=255)

                                                       cTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAttttt                                   <  1:3926559/93‑1 (MQ=255)

                                                       cTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAttttt                                   >  1:902586/1‑93 (MQ=255)

                                                       cTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAttttt                                   >  1:1742318/1‑93 (MQ=255)

                                                        tttCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTg                                  >  2:283076/1‑93 (MQ=255)

                                                         ttCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGc                                 >  1:433826/1‑93 (MQ=255)

                                                          tCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGcc                                <  2:1676777/93‑1 (MQ=255)

                                                          tCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGcc                                <  2:428261/93‑1 (MQ=255)

                                                            tGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCtt                              <  1:3691631/93‑1 (MQ=255)

                                                            tGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCtt                              <  2:290465/93‑1 (MQ=255)

                                                               tttttGCGCCAGTGGTGGCGCCGCCGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTa                           <  2:8527/93‑1 (MQ=255)

                                                               tttttACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTa                           <  1:3921409/93‑1 (MQ=255)

                                                                ttttACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTaa                          <  1:3385434/93‑1 (MQ=255)

                                                                ttttACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTaa                          <  2:15280/93‑1 (MQ=255)

                                                                 tttACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGTCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAAc                         <  1:2757108/93‑1 (MQ=255)

                                                                 tttACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAAc                         >  2:3505516/1‑93 (MQ=255)

                                                                  ttACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACa                        >  2:1865008/1‑93 (MQ=255)

                                                                  ttACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACa                        <  1:1240047/93‑1 (MQ=255)

                                                                  ttACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACa                        <  1:1898058/93‑1 (MQ=255)

                                                                     cGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTg                     >  2:1044638/1‑93 (MQ=255)

                                                                     cGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTg                     >  1:218961/1‑93 (MQ=255)

                                                                      gCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGc                    >  1:1355884/1‑93 (MQ=255)

                                                                       ccGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGcc                   >  2:2110422/1‑93 (MQ=255)

                                                                          gtggtgGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCa                >  1:615850/1‑93 (MQ=255)

                                                                           tggtggCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCaa               <  1:3099756/93‑1 (MQ=255)

                                                                             gtggCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATa             >  2:3722793/1‑93 (MQ=255)

                                                                               ggCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATaaa           >  2:1458021/1‑93 (MQ=255)

                                                                                gCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATaaaa          <  2:3800266/93‑1 (MQ=255)

                                                                                   ccGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTCACAGTGCCGCAATAAAACCt       >  1:597695/1‑93 (MQ=255)

                                                                                   ccGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCt       <  2:1749126/93‑1 (MQ=255)

                                                                                   ccGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCt       <  2:802271/93‑1 (MQ=255)

                                                                                   ccGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCt       >  1:4426813/1‑93 (MQ=255)

                                                                                    cGACGCCTAGAACCGAGATAGCCGCCGCTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTg      >  2:4447146/1‑93 (MQ=255)

                                                                                     gACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGa     >  1:3427006/1‑93 (MQ=255)

                                                                                     gACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGa     >  2:2451924/1‑93 (MQ=255)

                                                                                      aCGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGaa    <  2:2103307/93‑1 (MQ=255)

                                                                                        gCTTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGAAGc  >  2:681160/1‑93 (MQ=255)

TCTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCTTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGAAGC  >  NC_000913/1853986‑1854166

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`