Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 229,560 A→G T132A (ACG→GCG)  yafB → putative aldose reductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913229,5600AG99.4% 581.2 / ‑5.0 179T132A (ACG→GCG) yafBputative aldose reductase
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base G (75/103);  total (76/103)
Fisher's exact test for biased strand distribution p-value = 4.25e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01

Only 100 of 181 total aligned reads displayed.

AACGATGAAGTCTCTGTTGAAGAGTTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCACGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGATTGAACTCTCTCCTTATCTGCAAAAC  >  NC_000913/229470‑229649
                                                                                          |                                                                                         
 aCGATGAAGTCTCTGTTGAAGAGTTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGa                                                                                        <  2:3924387/93‑1 (MQ=255)
 aCGATGAAGTCCCTGTTGAAGAGGTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGa                                                                                        >  2:2707713/1‑93 (MQ=255)
   gATGAAGTCTCTGTTGAAGAGTTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATc                                                                                      <  2:2896775/93‑1 (MQ=255)
   gATGAAGTCTCTGTTGAAGAGTTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATc                                                                                      >  2:421921/1‑93 (MQ=255)
    aTGAAGTCTCTGTTGAAGAGTTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATcc                                                                                     >  2:2904252/1‑93 (MQ=255)
    aTGAAGTCTCTGTTGAAGAGTTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATcc                                                                                     <  1:3091914/93‑1 (MQ=255)
    aTGAAGTCTCTGTTGAAGAGTTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATcc                                                                                     <  1:647265/93‑1 (MQ=255)
     tGAAGTCTCTGTTGAAGAGTTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATccc                                                                                    <  1:2357380/93‑1 (MQ=255)
     tGAAGTCTCTGTTGAAGAGTTGATGCAGGCGCTGCTGGAATCCAAAAAACAAGGCCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATccc                                                                                    <  1:412487/93‑1 (MQ=255)
      gAAGTCTCTGTTGAAGAGTTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCg                                                                                   <  2:4439287/93‑1 (MQ=255)
      gAAGTCTCTGTTGAAGAGTTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCg                                                                                   >  1:2564421/1‑93 (MQ=255)
       aaGTCTCTGTTGAAGAGTTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGt                                                                                  <  2:1601705/93‑1 (MQ=255)
       aaGTCTCTGTTGAAGAGTTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCACGATCCCGt                                                                                  >  1:4369701/1‑93 (MQ=255)
        aGTCTCTGTTGAAGAGTTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGtt                                                                                 <  2:3511192/93‑1 (MQ=255)
        aGTCTCTGTTGAAGAGTTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGtt                                                                                 <  2:1498310/93‑1 (MQ=255)
          tctcTGTTGAAGAGTTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGa                                                                               >  2:332993/1‑93 (MQ=255)
          tctcTGTTGAAGAGTTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGa                                                                               <  2:3709212/93‑1 (MQ=255)
            tctGTTGAAGAGTTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATg                                                                             >  2:2148200/1‑93 (MQ=255)
            tctGTTGAAGAGTTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATg                                                                             <  1:2693950/93‑1 (MQ=255)
             ctGTTGAAGAGTTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATgg                                                                            <  2:1391023/93‑1 (MQ=255)
              tGTTGAAGAGTTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGa                                                                           >  1:4635024/1‑93 (MQ=255)
              tGTTGAAGAGTTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGa                                                                           >  2:3822669/1‑93 (MQ=255)
                 tGAAGAGTTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGaaaa                                                                        >  1:2253642/1‑93 (MQ=255)
                    agagTTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGc                                                                     >  1:2025178/1‑93 (MQ=255)
                    agagTTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGc                                                                     >  1:816664/1‑93 (MQ=255)
                       gTTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGAt                                                                  <  1:1670052/93‑1 (MQ=255)
                       gTTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGAt                                                                  <  1:3686728/93‑1 (MQ=255)
                        tttATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGAtt                                                                 <  2:4081670/93‑1 (MQ=255)
                        tttATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGAtt                                                                 <  1:3513467/93‑1 (MQ=255)
                        tttATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGAtt                                                                 <  1:3127801/93‑1 (MQ=255)
                          tATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATtgc                                                               <  2:2228330/93‑1 (MQ=255)
                          tATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATtgc                                                               <  2:3169545/93‑1 (MQ=255)
                          tATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATtgc                                                               <  2:1382465/93‑1 (MQ=255)
                           ttGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATtgct                                                              <  2:3782480/92‑1 (MQ=255)
                           aTGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATtgct                                                              <  2:2776061/93‑1 (MQ=255)
                           aTGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATtgct                                                              <  1:121943/93‑1 (MQ=255)
                            tGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATtgctg                                                             >  2:4348948/1‑93 (MQ=255)
                            gccAGGCCCTGCTGGAAGGCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATtgctg                                                             <  1:2709571/91‑1 (MQ=255)
                             gCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATtgctgc                                                            <  1:2675089/93‑1 (MQ=255)
                             gCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATtgctgc                                                            >  2:734446/1‑93 (MQ=255)
                                ggCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGt                                                         >  1:3268220/1‑93 (MQ=255)
                                ggCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGt                                                         >  1:4725063/1‑93 (MQ=255)
                                ggCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGt                                                         >  2:4489666/1‑93 (MQ=255)
                                ggCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGt                                                         >  1:1394510/1‑93 (MQ=255)
                                ggCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTACTGCTGt                                                         >  2:1141667/1‑93 (MQ=255)
                                 gcgcTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGtt                                                        <  2:2150684/93‑1 (MQ=255)
                                   gctgctGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTgg                                                      >  1:1640668/1‑93 (MQ=255)
                                   gctgctGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTAGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTgg                                                      >  1:1173354/1‑93 (MQ=255)
                                    ctgctgGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGt                                                     <  2:1231893/93‑1 (MQ=255)
                                    ctgctgGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGt                                                     <  2:1823433/93‑1 (MQ=255)
                                    ctgctgGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGt                                                     <  2:2883317/93‑1 (MQ=255)
                                        tgGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTg                                                 >  1:1821097/1‑93 (MQ=255)
                                        tgGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTg                                                 >  2:2618572/1‑93 (MQ=255)
                                        tgGAAGCCAAAAAACAAGCGCTGACGTGAGAGATCGGAATTTCCAACTTCGCGATCTCGTTGATGAAAAAAGAGATTACTGCTGATActgctg                                                 >  2:2427450/1‑93 (MQ=255)
                                         ggAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGa                                                >  1:4100729/1‑93 (MQ=255)
                                         ggAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGAGATTGCTGCTGTTGGTGCTGa                                                >  1:1417648/1‑93 (MQ=255)
                                          gAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGaa                                               >  2:465114/1‑93 (MQ=255)
                                            aGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGaaaa                                             <  1:1770575/93‑1 (MQ=255)
                                            aGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGaaaa                                             >  2:3616672/1‑93 (MQ=255)
                                            aGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGaaaa                                             >  2:21680/1‑93 (MQ=255)
                                             gCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAAc                                            <  1:4400337/93‑1 (MQ=255)
                                                aaaaaaCAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATc                                         <  2:1485595/93‑1 (MQ=255)
                                                aaaaaaCAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATc                                         <  2:173373/93‑1 (MQ=255)
                                                aaaaaaCAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATc                                         >  2:2549658/1‑93 (MQ=255)
                                                 aaaaaCAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCg                                        <  1:2208963/93‑1 (MQ=255)
                                                  aaaaCAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGc                                       <  1:3564931/93‑1 (MQ=255)
                                                  aaaaCAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGc                                       <  2:2843406/93‑1 (MQ=255)
                                                    aaCAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGcta                                     <  2:1813256/93‑1 (MQ=255)
                                                      cAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGctact                                   >  2:1700023/1‑93 (MQ=255)
                                                       aaGGGCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGGTGGTGCTGAAAACATCGctacta                                  >  2:2590105/1‑93 (MQ=255)
                                                          ggCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAAcc                               <  1:1597558/93‑1 (MQ=255)
                                                           gCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCa                              <  1:1482602/93‑1 (MQ=255)
                                                           gCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCa                              <  1:3380604/93‑1 (MQ=255)
                                                           gCTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCa                              <  2:3406808/93‑1 (MQ=255)
                                                            cTGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAg                             <  1:2102850/93‑1 (MQ=255)
                                                             tGACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGa                            >  2:3690228/1‑93 (MQ=255)
                                                              gACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGAt                           <  1:1476121/93‑1 (MQ=255)
                                                              gACGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGAt                           <  1:2969434/93‑1 (MQ=255)
                                                               aCGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGAtt                          <  2:1291544/93‑1 (MQ=255)
                                                               aCGCGTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGAtt                          <  1:4292946/93‑1 (MQ=255)
                                                                  cgTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGATTGaa                       >  2:628604/1‑93 (MQ=255)
                                                                   gTGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGATTGAAc                      <  2:2898508/93‑1 (MQ=255)
                                                                    tGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGATTGAAct                     >  1:3196198/1‑93 (MQ=255)
                                                                    tGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGATTGAAct                     >  2:2345521/1‑93 (MQ=255)
                                                                    tGAGATCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGATTGAAct                     >  1:1063073/1‑93 (MQ=255)
                                                                     gagaTCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGATTGAActc                    >  2:3239678/1‑93 (MQ=255)
                                                                     gagaTCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGATTGAActc                    <  1:1953023/93‑1 (MQ=255)
                                                                       gaTCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGATTGAActctc                  >  1:1740736/1‑93 (MQ=255)
                                                                         tCGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGATTGAACtctctc                <  2:955015/93‑1 (MQ=255)
                                                                         tCGGTATCTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGATTGAACtctctc                <  1:1874671/93‑1 (MQ=255)
                                                                          cGGTATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGATTGAACTCTCTcc               <  2:3043711/93‑1 (MQ=255)
                                                                             tATTTCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGATTGAACTCTCTCCTTa            <  2:4026740/93‑1 (MQ=255)
                                                                                ttCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGATTGAACTCTCTCCTTATCt         <  2:3636918/93‑1 (MQ=255)
                                                                                ttCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGATTGAACTCTCTCCTTATCt         <  1:333405/93‑1 (MQ=255)
                                                                                ttCCAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGATTGAACTCTCTCCTTATCt         <  1:858900/93‑1 (MQ=255)
                                                                                  ccAACTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGATTGAACTCTCTCCTTATCTGc       >  2:563652/1‑93 (MQ=255)
                                                                                    aaCTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGATTGAACTCTCTCCTTATCTGCaa     >  2:766203/1‑93 (MQ=255)
                                                                                      cTTCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGATTGAACTCTCTCCTTATCTGCaaaa   >  2:3305460/1‑93 (MQ=255)
                                                                                       ttCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAATCAGATTGAACTCTCTCCTTATCTGCAAAAc  >  2:884176/1‑93 (MQ=255)
                                                                                       ttCGCGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGATTGAACTCTCTCCTTATCTGCAAAAc  <  2:3536180/93‑1 (MQ=255)
                                                                                          |                                                                                         
AACGATGAAGTCTCTGTTGAAGAGTTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCACGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGATTGAACTCTCTCCTTATCTGCAAAAC  >  NC_000913/229470‑229649

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: