Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,066,300 T→C intergenic (‑957/‑330) trs56 ← / → b1995 IS5 transposase/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,066,3000TC99.3% 460.2 / NA 139intergenic (‑957/‑330)trs56/b1995IS5 transposase/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (35/103);  minor base A (1/0);  total (36/103)
Fisher's exact test for biased strand distribution p-value = 2.59e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 139 total aligned reads displayed.

CTGGCCATTAGAGTAACCTTCTGCATTCATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGTCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACAATGATGGTACCTTCTTTCAGAC  >  NC_000913/2066211‑2066389
                                                                                         |                                                                                         
ctGGCCATTAGAGTAACCTTCTACATTCATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCtt                                                                                        <  2:246530/93‑1 (MQ=255)
  ggCCATTAGAGTAACCTTCTGCATTCATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTAc                                                                                      <  1:1716044/93‑1 (MQ=255)
   gCCATTAGAGTAACCTTCTGCATTCATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTAcc                                                                                     >  2:258553/1‑93 (MQ=255)
     cATTAGAGTAACCTTCTGCATTCATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGc                                                                                   <  1:1213190/93‑1 (MQ=255)
      aTTAGAGTAACCTTCTGCATTCATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCa                                                                                  >  1:2712800/1‑93 (MQ=255)
        tAGAGTAACCTTCTGCATTCATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCata                                                                                <  2:3086874/93‑1 (MQ=255)
        tAGAGTAACCTTCTGCATTCATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCata                                                                                <  2:608543/93‑1 (MQ=255)
          gagTAACCTTCTGCATTCATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCAtata                                                                              <  1:556421/93‑1 (MQ=255)
          gagTAACCTTCTGCATTCATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCAtata                                                                              <  2:3123789/93‑1 (MQ=255)
          gagTAACCTTCTGCATTCATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCAtata                                                                              <  1:3359701/93‑1 (MQ=255)
          gagTAACCTTCTGCATTCATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCAtata                                                                              <  2:3112796/93‑1 (MQ=255)
           agTAACCTTCTGCATTCATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATAc                                                                             <  1:3266875/93‑1 (MQ=255)
           agTAACCTTCTGCATTCATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATAc                                                                             >  2:167372/1‑93 (MQ=255)
            gTAACCTTCTGCATTCATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGTTACTGATATGAGCCTTACCGCATATACg                                                                            >  1:4461849/1‑93 (MQ=255)
               aCCTTCTGCATTCATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTc                                                                         >  2:1126301/1‑93 (MQ=255)
                 cTTCTGCATTCATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCaa                                                                       <  2:436833/93‑1 (MQ=255)
                  ttCTGCATTCATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAAt                                                                      <  1:89226/93‑1 (MQ=255)
                  ttCTGCATTCATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAAt                                                                      <  1:619223/93‑1 (MQ=255)
                   tCTGCATTCATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAAtt                                                                     <  2:182719/93‑1 (MQ=255)
                    cTGCATTCATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAAttt                                                                    <  1:2666989/93‑1 (MQ=255)
                    cTGCATTCATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAAttt                                                                    <  2:868533/93‑1 (MQ=255)
                     tGCATTCATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTc                                                                   <  1:3099289/93‑1 (MQ=255)
                         ttCATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCa                                                               >  2:4669058/1‑93 (MQ=255)
                          tCATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCaa                                                              <  2:1879020/93‑1 (MQ=255)
                          tCATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCaa                                                              >  1:3788058/1‑93 (MQ=255)
                           cATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCaat                                                             >  2:65710/1‑93 (MQ=255)
                           cATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCaat                                                             <  2:1683430/93‑1 (MQ=255)
                           cATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCaat                                                             >  2:3386357/1‑93 (MQ=255)
                           cATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCaat                                                             >  1:952107/1‑93 (MQ=255)
                            aTCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCaatt                                                            >  2:4530759/1‑93 (MQ=255)
                             tCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCaatta                                                           <  2:2931017/93‑1 (MQ=255)
                             tCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCaatta                                                           <  1:1019569/93‑1 (MQ=255)
                              ccTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCaattaa                                                          >  2:758054/1‑93 (MQ=255)
                               cTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATGCTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCaattaat                                                         <  2:3976365/93‑1 (MQ=255)
                               cTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCaattaat                                                         >  1:2474791/1‑93 (MQ=255)
                                ttttGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCaattaatt                                                        <  1:4207239/93‑1 (MQ=255)
                                ttttGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCaattaatt                                                        <  2:183495/93‑1 (MQ=255)
                                   tGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACa                                                     <  1:1192120/93‑1 (MQ=255)
                                   tGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACa                                                     <  1:2856093/93‑1 (MQ=255)
                                    gTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACAt                                                    >  1:2921442/1‑93 (MQ=255)
                                    gTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACAt                                                    <  2:1651973/93‑1 (MQ=255)
                                     tAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACAtt                                                   <  2:1752002/93‑1 (MQ=255)
                                        aaaGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATc                                                <  2:1466558/93‑1 (MQ=255)
                                         aaGTTTATATTAGTATCAGCAATTAGCCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATcc                                               <  2:4497299/93‑1 (MQ=255)
                                         aaGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATcc                                               <  2:529078/93‑1 (MQ=255)
                                         aaGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATcc                                               <  1:756300/93‑1 (MQ=255)
                                           gTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCAc                                             >  1:3594558/1‑93 (MQ=255)
                                            tttATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACg                                            >  1:962471/1‑93 (MQ=255)
                                               atatTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCa                                         <  1:4569569/93‑1 (MQ=255)
                                                 atTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCaaa                                       <  2:4591823/93‑1 (MQ=255)
                                                 atTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCaaa                                       <  1:3908759/93‑1 (MQ=255)
                                                 atTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCaaa                                       <  2:3084702/93‑1 (MQ=255)
                                                  ttAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAg                                      <  2:1034311/93‑1 (MQ=255)
                                                  ttAGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAg                                      <  1:849321/93‑1 (MQ=255)
                                                    aGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTa                                    <  1:2109163/93‑1 (MQ=255)
                                                    aGTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTa                                    <  2:1663968/93‑1 (MQ=255)
                                                     gTATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTAt                                   <  1:3922990/93‑1 (MQ=255)
                                                      tATCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTAtt                                  <  1:1864713/93‑1 (MQ=255)
                                                        tCAGCAATTAACCGTACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTg                                <  2:3308032/93‑1 (MQ=255)
                                                        tCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTg                                <  2:4370131/93‑1 (MQ=255)
                                                        tCAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTg                                <  2:255839/93‑1 (MQ=255)
                                                         cAGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGt                               <  1:2481384/93‑1 (MQ=255)
                                                          aGCAATTAGCCGGACCTGATACTCATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACAGTATCCACGCCAAAGTATTTGtc                              <  1:2308107/93‑1 (MQ=255)
                                                          aGCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGtc                              <  2:4188414/93‑1 (MQ=255)
                                                           gCAATTAACCGGACCTGATACTTATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGtca                             <  1:2681978/93‑1 (MQ=255)
                                                           gCAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGtca                             >  1:4114920/1‑93 (MQ=255)
                                                            cAATTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGtcat                            <  2:4125384/93‑1 (MQ=255)
                                                             aaTTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGtcatc                           <  2:1247086/93‑1 (MQ=255)
                                                              aTTAACCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGtcatca                          <  2:1819311/93‑1 (MQ=255)
                                                                 aaCCGGACCTGATACTGATATGAGCCTTTCCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACaa                       <  2:949915/93‑1 (MQ=255)
                                                                 aaCCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACaa                       <  2:789157/93‑1 (MQ=255)
                                                                  aCCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCCCGCCAAAGTATTTGTCATCACAat                      <  2:3927759/93‑1 (MQ=255)
                                                                  aCCGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACAat                      <  1:1978632/93‑1 (MQ=255)
                                                                    cGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACAatga                    <  2:3273388/93‑1 (MQ=255)
                                                                    cGGACCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACAatga                    <  2:4527454/93‑1 (MQ=255)
                                                                       aCCTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACAATGATgg                 <  2:2491029/93‑1 (MQ=255)
                                                                        ccTGATACTGATATGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACAATGATGGt                >  2:3398672/1‑93 (MQ=255)
                                                                         ctgatactgataTGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACAATGATGGTa               <  2:481105/93‑1 (MQ=255)
                                                                         ctgatactgataTGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACAATGATGGTa               <  1:4197381/93‑1 (MQ=255)
                                                                          tgatactgataTGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACAATGATGGTAc              >  1:3024595/1‑93 (MQ=255)
                                                                          tgatactgataTGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACAATGATGGTAc              >  1:3739384/1‑93 (MQ=255)
                                                                            atactgataTGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACAATGATGGTACct            <  2:1579826/93‑1 (MQ=255)
                                                                            atactgataTGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACAATGATGGTACct            <  1:4251320/93‑1 (MQ=255)
                                                                             tactgataTGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACAATGATGGTACctt           >  1:2655110/1‑93 (MQ=255)
                                                                             tactgataTGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACAATGATGGTACctt           >  1:4636883/1‑93 (MQ=255)
                                                                             tactgataTGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACAATGATGGTACctt           <  2:1231694/93‑1 (MQ=255)
                                                                              actgataTGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACAGTGATGGTACcttc          <  1:3135431/93‑1 (MQ=255)
                                                                              actgataTGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACAATGATGGTACcttc          <  1:3977780/93‑1 (MQ=255)
                                                                              actgataTGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACAATGATGGTACcttc          <  1:1538153/93‑1 (MQ=255)
                                                                               ctgataTGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACAATGATGGTACcttct         <  1:1427841/93‑1 (MQ=255)
                                                                               ctgataTGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACAATGATGGTACcttct         <  1:1787177/93‑1 (MQ=255)
                                                                               ctgataTGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACAATGATGGTACcttct         <  2:167159/93‑1 (MQ=255)
                                                                               ctgataTGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAACTACATTATCCACGCCAAAGTATTTGTCATCACAATGATGGTACcttct         >  1:3315687/1‑93 (MQ=255)
                                                                                tgataTGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACAATGATGGTACcttctt        <  2:3408150/93‑1 (MQ=255)
                                                                                tgataTGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACAATGATGGTACcttctt        <  2:1019977/93‑1 (MQ=255)
                                                                                tgataTGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACAATGATGGTACcttctt        <  2:1832965/93‑1 (MQ=255)
                                                                                 gataTGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACAATGATGGTACCTTCttt       >  2:3751640/1‑93 (MQ=255)
                                                                                    atGAGCCTTCCCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACAATGATGGTACCTTCTTTCAg    <  2:2299255/93‑1 (MQ=255)
                                                                                     tGAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACAATGATGGTACCTTCTTTCAGa   <  1:3003989/93‑1 (MQ=255)
                                                                                      gAGCCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACAATGATGGTACCTTCTTTCAGac  <  1:3399642/93‑1 (MQ=255)
                                                                                         |                                                                                         
CTGGCCATTAGAGTAACCTTCTGCATTCATCCTTTTGTAAAAAGTTTATATTAGTATCAGCAATTAACCGGACCTGATACTGATATGAGTCTTACCGCATATACGGTCAATTTCAGCAATTAATTACATTATCCACGCCAAAGTATTTGTCATCACAATGATGGTACCTTCTTTCAGAC  >  NC_000913/2066211‑2066389

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: