Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,392,487 T→C T194A (ACC→GCC)  nuoL ← NADH dehydrogenase I chain L

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,392,4870TC98.5% 400.1 / ‑2.4 132T194A (ACC→GCC) nuoLNADH dehydrogenase I chain L
Reads supporting (aligned to +/- strand):  ref base T (0/2);  new base C (61/69);  total (61/71)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.84e-01

Only 100 of 136 total aligned reads displayed.

CAGCAGCATCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGTGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGCCGCTGCGC  >  NC_000913/2392398‑2392576
                                                                                         |                                                                                         
cagcagCATCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGcc                                                                                        >  2:4604013/1‑93 (MQ=255)
cagcagCATCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGcc                                                                                        <  2:3642279/93‑1 (MQ=255)
cagcagCATCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGcc                                                                                        >  1:886586/1‑93 (MQ=255)
 cgcagcaTCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGccc                                                                                       <  1:1504116/92‑1 (MQ=255)
 agcagcATCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGccc                                                                                       >  2:2923840/1‑93 (MQ=255)
 agcagcATCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGccc                                                                                       >  2:4463160/1‑93 (MQ=255)
  gcagcaTCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCa                                                                                      >  2:252111/1‑93 (MQ=255)
  gcagcaTCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCa                                                                                      <  1:1889124/93‑1 (MQ=255)
   cagcaTCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAg                                                                                     <  2:3464571/93‑1 (MQ=255)
    agcaTCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGt                                                                                    >  1:3370089/1‑93 (MQ=255)
    agcaTCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGt                                                                                    >  1:2587166/1‑93 (MQ=255)
     gcaTCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGtt                                                                                   >  2:2232479/1‑93 (MQ=255)
        tCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGt                                                                                <  1:559898/93‑1 (MQ=255)
         cAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGtt                                                                               <  1:1278215/93‑1 (MQ=255)
         cAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGtt                                                                               <  1:2212527/93‑1 (MQ=255)
         cAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGtt                                                                               <  2:2798405/93‑1 (MQ=255)
           gCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGt                                                                             >  1:3468593/1‑93 (MQ=255)
              tCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTaaa                                                                          <  1:3895960/93‑1 (MQ=255)
               cGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAg                                                                         >  1:4690744/1‑93 (MQ=255)
               cGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAg                                                                         >  1:3692733/1‑93 (MQ=255)
                gCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGa                                                                        >  1:1054283/1‑93 (MQ=255)
                gCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGa                                                                        >  1:1179017/1‑93 (MQ=255)
                 cccACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAACGaa                                                                       <  1:4102195/93‑1 (MQ=255)
                 cccACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGaa                                                                       <  1:1125045/93‑1 (MQ=255)
                 cccACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGaa                                                                       <  1:241980/93‑1 (MQ=255)
                 cccACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGaa                                                                       <  2:1320517/93‑1 (MQ=255)
                  ccACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAAt                                                                      <  1:436506/93‑1 (MQ=255)
                  ccACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAAt                                                                      <  2:415421/93‑1 (MQ=255)
                   cacaTCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGTAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATg                                                                     >  1:4580093/1‑93 (MQ=255)
                   cacaTCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATg                                                                     <  2:397021/93‑1 (MQ=255)
                    acaTCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGa                                                                    >  1:545210/1‑93 (MQ=255)
                    acaTCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGa                                                                    <  2:1169304/93‑1 (MQ=255)
                       tCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACa                                                                 <  2:4162901/93‑1 (MQ=255)
                        cAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGTGCCCAGTTCGTGGTAAAGAATGAACAg                                                                <  2:3862181/93‑1 (MQ=255)
                        cAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAg                                                                >  1:3893956/1‑93 (MQ=255)
                         aGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGt                                                               >  1:3677658/1‑93 (MQ=255)
                         aGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGt                                                               <  1:2191927/93‑1 (MQ=255)
                         aGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGt                                                               >  2:262224/1‑93 (MQ=255)
                          gCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTg                                                              >  1:3230383/1‑93 (MQ=255)
                          gCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTCCGTTGTAAAGAATGAACAGTg                                                              >  2:4380444/1‑93 (MQ=255)
                          gCATGTTATTGCCGTCAGCAAAGTGCGCTGGTCCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTg                                                              >  2:1001752/1‑93 (MQ=255)
                           cATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGc                                                             <  1:3537090/93‑1 (MQ=255)
                            ctGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCg                                                            <  1:608180/92‑1 (MQ=255)
                            aTGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCg                                                            <  2:4610667/93‑1 (MQ=255)
                            aTGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCg                                                            <  2:757508/93‑1 (MQ=255)
                            aTGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCg                                                            >  2:3296151/1‑93 (MQ=255)
                             tGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGa                                                           >  1:3389865/1‑93 (MQ=255)
                             tGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGa                                                           <  2:1607409/93‑1 (MQ=255)
                               ttATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGaaa                                                         <  2:2361852/93‑1 (MQ=255)
                                 aTTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGc                                                       <  1:1595828/93‑1 (MQ=255)
                                 aTTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGc                                                       >  2:4140409/1‑93 (MQ=255)
                                   tGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGa                                                     <  1:2578164/93‑1 (MQ=255)
                                    gCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGCTCGTTGTAAAGAATGAACAGTGCGAAagagag                                                    >  2:1951890/1‑93 (MQ=255)
                                       gTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGaa                                                 <  2:1154636/93‑1 (MQ=255)
                                         cAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAaca                                               >  2:751399/1‑93 (MQ=255)
                                         cAGCAAAGTGCCCTGGTGCCAGTTCCCCCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAaca                                               <  1:4096898/93‑1 (MQ=255)
                                          aGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGCTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAacac                                              <  2:4451146/93‑1 (MQ=255)
                                            cAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGt                                            >  1:2878797/1‑93 (MQ=255)
                                                 tGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCAccc                                       <  1:1630566/93‑1 (MQ=255)
                                                  gcgcTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCca                                      >  1:1211858/1‑93 (MQ=255)
                                                   cgcTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCcac                                     >  2:1636071/1‑93 (MQ=255)
                                                     cTGGTGCCAGTTCCCCCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCacac                                   <  1:3882060/93‑1 (MQ=255)
                                                     cTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCacac                                   >  2:3716403/1‑93 (MQ=255)
                                                     cTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCacac                                   <  1:3882059/93‑1 (MQ=255)
                                                       ggTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACgg                                 <  1:3851368/93‑1 (MQ=255)
                                                        gTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGCAAGCGAGGAACACGTCACCAACACggg                                >  1:3710401/1‑93 (MQ=255)
                                                         tGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGt                               >  2:1101578/1‑93 (MQ=255)
                                                          gCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTc                              >  1:3496827/1‑93 (MQ=255)
                                                          gCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTc                              >  1:40207/1‑93 (MQ=255)
                                                           ccAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCa                             <  1:507047/93‑1 (MQ=255)
                                                           ccAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGGTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCa                             >  1:3025532/1‑93 (MQ=255)
                                                            cAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCac                            >  1:383063/1‑93 (MQ=255)
                                                            cAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCac                            <  2:1127507/93‑1 (MQ=255)
                                                            cAGATCCACCATTTCGCTGAAGTTCAGGGCGCCCTGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCac                            <  2:2539137/93‑1 (MQ=255)
                                                              gTTCCACCATTTCGCGGAAGGTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTACGAAAGCGAGGAACACGTCACCCACACGGGGCacga                          >  1:693182/1‑93 (MQ=255)
                                                               ttCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCacgac                         >  2:402317/1‑93 (MQ=255)
                                                                tCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCacgacg                        >  1:3889403/1‑93 (MQ=255)
                                                                 cccccaTTTCGCGGAAGTTCAGGGCGCCCGGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTTACCCACACGGGTCAcgacga                       <  1:109424/90‑1 (MQ=255)
                                                                  caccaTTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGaa                      >  2:3847924/1‑93 (MQ=255)
                                                                  caccaTTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGaa                      >  1:2379484/1‑93 (MQ=255)
                                                                   cccaTTTCGCGGAAGTTCAGGGCGCACAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAAc                     <  1:1057427/92‑1 (MQ=255)
                                                                   accaTTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAAc                     >  1:4269937/1‑93 (MQ=255)
                                                                   accaTTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAAc                     >  2:1366924/1‑93 (MQ=255)
                                                                    ccaGTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACg                    <  2:3137335/93‑1 (MQ=255)
                                                                       tttCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCtt                 >  2:4570675/1‑93 (MQ=255)
                                                                       tgtCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCtt                 <  1:3596282/91‑1 (MQ=255)
                                                                         tCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTc               <  2:1888274/93‑1 (MQ=255)
                                                                          cgcgGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCa              <  1:4441276/93‑1 (MQ=255)
                                                                           gcgGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCAt             <  2:3843895/93‑1 (MQ=255)
                                                                            cgGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCAtt            <  1:3971232/93‑1 (MQ=255)
                                                                             ggAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTg           >  2:358044/1‑93 (MQ=255)
                                                                              gAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGc          >  1:2756817/1‑93 (MQ=255)
                                                                                aGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGCCg        >  2:1308984/1‑93 (MQ=255)
                                                                                 gTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGCCGc       >  1:4462633/1‑93 (MQ=255)
                                                                                 gTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGCCGc       <  1:2979664/93‑1 (MQ=255)
                                                                                 gTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGCCGc       <  1:2956331/93‑1 (MQ=255)
                                                                                   tCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGCCGCTg     <  1:1979194/93‑1 (MQ=255)
                                                                                    cAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGCCGCTgc    <  1:4325332/93‑1 (MQ=255)
                                                                                    cAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGCCGCTgc    <  1:1101282/93‑1 (MQ=255)
                                                                                      gggCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGCCGCTgcgc  <  1:1148107/93‑1 (MQ=255)
                                                                                         |                                                                                         
CAGCAGCATCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGTGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGCCGCTGCGC  >  NC_000913/2392398‑2392576

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑