BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,429,483	T→C	E65E (GAA→GAG)	dedD ←	putative lipoprotein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,429,483	0	T	C	99.1%	367.8 / NA	116	E65E (GAA→GAG)	dedD	putative lipoprotein
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (55/60); total (56/60)
Fisher's exact test for biased strand distribution p-value = 4.83e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 122 total aligned reads displayed.

GACCGGTGCAGGTTCCGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACTTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGCCCGCTTTCGG  >  NC_000913/2429393‑2429572

gACAGGTGCAGGTTCCGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCAcctc                                                                                         <  2:2805137/93‑1 (MQ=255)

  ccGGTGCAGGTTCCGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGCGCTGCGGCATCACCTGCCCGCAcctctt                                                                                       <  1:3418463/93‑1 (MQ=255)

   cGGTGCAGGTTCCGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACctcttc                                                                                      <  1:1108649/93‑1 (MQ=255)

   cGGTGCAGGTTCCGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACctcttc                                                                                      <  2:3740189/93‑1 (MQ=255)

       gCAGGTTCGGGTACAACGTCGGTGTTATTGGATGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCTCCTCTTCCGCt                                                                                  <  2:3952743/93‑1 (MQ=255)

       gCAGGTTCCGGTTCAACCTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCt                                                                                  <  2:3215880/93‑1 (MQ=255)

        gaGGTTCCGGTGCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTg                                                                                 <  1:2813476/92‑1 (MQ=255)

        cAGGTTCCGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTg                                                                                 <  1:2443427/93‑1 (MQ=255)

         aGGTTCCGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTgc                                                                                <  2:2967084/93‑1 (MQ=255)

         aGGTTCCGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTgc                                                                                <  1:2924712/93‑1 (MQ=255)

         aGGTTCCGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTgc                                                                                <  1:2924710/93‑1 (MQ=255)

         aGGTTCCGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATAACCTGCCCGCACCTCTTCCGCTgc                                                                                >  2:4044059/1‑93 (MQ=255)

          ggTTCCGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTgcg                                                                               >  1:3220406/1‑93 (MQ=255)

           gTTCCGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTgcgc                                                                              <  1:1000122/93‑1 (MQ=255)

             tCCGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCt                                                                            >  1:361642/1‑93 (MQ=255)

               ctgTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTc                                                                          <  1:2633761/91‑1 (MQ=255)

               cGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTc                                                                          <  1:4602824/93‑1 (MQ=255)

               cGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGGGCTGCGGCATCACCTGCCCGCAACTCTTACGCTGCGCCTTc                                                                          >  2:1843358/1‑93 (MQ=255)

                 gTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCcg                                                                        >  1:150015/1‑93 (MQ=255)

                     aaaCTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCcggcgg                                                                    >  1:2642181/1‑93 (MQ=255)

                      aaCTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCggcggc                                                                   >  2:3604289/1‑93 (MQ=255)

                      aaCTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCggcggc                                                                   <  2:624442/93‑1 (MQ=255)

                       aCTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCt                                                                  >  2:4421403/1‑93 (MQ=255)

                         tCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGc                                                                >  1:333878/1‑93 (MQ=255)

                         tCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCACACCTCTTCCGCTGCGCCTTCCGGCGGCTGc                                                                >  1:3852475/1‑93 (MQ=255)

                           gttgtTATTGGCTGCAATAGTGGCCGTATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGt                                                              <  2:4722/91‑1 (MQ=255)

                           ggTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGTTGCGGCTTCACCTGCCCGCACTTCTTCCGCTGCGCCTTCCGGCGGCTGCGt                                                              >  1:4200950/1‑93 (MQ=255)

                           ggTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTCCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGt                                                              <  2:4721/93‑1 (MQ=255)

                            gtgtTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTc                                                             >  1:2838092/1‑93 (MQ=255)

                              gtTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCgg                                                           >  2:410384/1‑93 (MQ=255)

                              gtTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCgg                                                           <  2:2856420/93‑1 (MQ=255)

                                tATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTa                                                         >  2:4006322/1‑93 (MQ=255)

                                tATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTa                                                         <  1:1433165/93‑1 (MQ=255)

                                 aTTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCCCCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTaa                                                        <  2:2166640/93‑1 (MQ=255)

                                 aTTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTaa                                                        <  1:3003914/93‑1 (MQ=255)

                                 aTTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTaa                                                        >  1:4591186/1‑93 (MQ=255)

                                  ttGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAAc                                                       <  2:2256574/93‑1 (MQ=255)

                                    ggCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGGGCCTTCCGGCGGCTGTGTCGGTAACGc                                                     >  1:2925125/1‑93 (MQ=255)

                                    ggCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGc                                                     <  1:1027237/93‑1 (MQ=255)

                                     gCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGcc                                                    <  2:3581978/93‑1 (MQ=255)

                                     gCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGcc                                                    <  1:1579488/93‑1 (MQ=255)

                                       tGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTg                                                  <  1:3960512/93‑1 (MQ=255)

                                       tGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTg                                                  >  2:2723892/1‑93 (MQ=255)

                                       tGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTg                                                  <  1:3302408/93‑1 (MQ=255)

                                        gCATTAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTgg                                                 <  2:279685/93‑1 (MQ=255)

                                        gCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTgg                                                 <  2:279686/93‑1 (MQ=255)

                                          aaTAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTgggg                                               >  2:1809418/1‑92 (MQ=255)

                                          aaTAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTgggg                                               >  2:1809417/1‑92 (MQ=255)

                                          aaTAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGt                                               <  2:317670/93‑1 (MQ=255)

                                          aaTAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGt                                               <  1:1808263/93‑1 (MQ=255)

                                           aTAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTg                                              <  2:688494/93‑1 (MQ=255)

                                           aTAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTg                                              <  1:666098/93‑1 (MQ=255)

                                           aTAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGAGTCGGTAACGCCTGGGTg                                              <  2:3479858/93‑1 (MQ=255)

                                               tGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTggcgg                                          <  2:4076874/93‑1 (MQ=255)

                                                ggCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTggcggc                                         <  1:1339933/93‑1 (MQ=255)

                                                 gCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCt                                        >  2:2367975/1‑93 (MQ=255)

                                                  ccGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTg                                       <  1:1876933/93‑1 (MQ=255)

                                                     gATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGca                                    >  2:3896302/1‑93 (MQ=255)

                                                     gATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGca                                    >  2:3896301/1‑93 (MQ=255)

                                                      aTCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGcat                                   >  2:2980188/1‑93 (MQ=255)

                                                        cGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGcatca                                 >  2:2888361/1‑93 (MQ=255)

                                                         gAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGcatcat                                >  1:2859476/1‑93 (MQ=255)

                                                           gCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCatat                              <  1:4370980/93‑1 (MQ=255)

                                                           gCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGAATTatat                              >  2:1135855/1‑93 (MQ=255)

                                                           gCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGGGGCGGCTGGCATCatat                              >  2:1135854/1‑93 (MQ=255)

                                                              aCGGTGCTGCGGCATCACCTGCCCGCAGCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAg                           <  1:1644698/93‑1 (MQ=255)

                                                              aCGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAg                           <  2:2304152/93‑1 (MQ=255)

                                                              aCGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAg                           <  1:2038495/93‑1 (MQ=255)

                                                              aCGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAg                           >  2:3909215/1‑93 (MQ=255)

                                                              aCGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAg                           >  1:4162107/1‑93 (MQ=255)

                                                                 gTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCt                        <  1:558333/93‑1 (MQ=255)

                                                                   gctgcGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCtca                      <  2:687239/93‑1 (MQ=255)

                                                                     tgcGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCtcatc                    >  1:4126967/1‑93 (MQ=255)

                                                                     tgcGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCtcatc                    >  1:2637880/1‑93 (MQ=255)

                                                                      gcGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCtcatca                   >  2:4510263/1‑93 (MQ=255)

                                                                      gcGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCtcatca                   <  1:1049365/93‑1 (MQ=255)

                                                                        ggCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACg                 >  1:2474954/1‑93 (MQ=255)

                                                                         gCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGa                <  2:3165290/93‑1 (MQ=255)

                                                                          cATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGAt               <  2:3007544/93‑1 (MQ=255)

                                                                          cATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGAt               <  1:2405400/93‑1 (MQ=255)

                                                                          cATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGAt               >  2:1733458/1‑93 (MQ=255)

                                                                           aTCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATc              >  2:3392410/1‑93 (MQ=255)

                                                                           aTCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATc              <  1:1246741/93‑1 (MQ=255)

                                                                            tCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCg             >  2:1383204/1‑93 (MQ=255)

                                                                            tCACCTGCCCGCACCTCGCCCGCTGCGCCTTCCGGCGGCTGCGGCGGGAACGCCCGGGGGGCGGCCGGCAGCATAGCAGGCTCACCACGACCg             >  1:3615451/1‑93 (MQ=255)

                                                                             cACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGc            <  2:3586626/93‑1 (MQ=255)

                                                                             cACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGc            >  1:2009665/1‑93 (MQ=255)

                                                                              cccTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGcc           <  2:1795213/92‑1 (MQ=255)

                                                                              aCCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCCGATGAGGGTCATCCCGATCggc           >  1:3434456/1‑91 (MQ=255)

                                                                              aCCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGcc           >  1:3434455/1‑93 (MQ=255)

                                                                              aCCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCATGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGcc           <  1:1775522/93‑1 (MQ=255)

                                                                               ccTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGccc          >  2:4702375/1‑93 (MQ=255)

                                                                               ccTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGccc          >  1:410700/1‑93 (MQ=255)

                                                                                cTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGCCCg         >  1:1669925/1‑93 (MQ=255)

                                                                                 tGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGCCCGc        <  1:4080563/93‑1 (MQ=255)

                                                                                  tcccGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGCCCGCt       <  2:338750/92‑1 (MQ=255)

                                                                                  gCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGCCCGCt       <  2:710771/93‑1 (MQ=255)

                                                                                  cgccGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGCCCGCt       <  1:955751/91‑1 (MQ=255)

                                                                                    ccGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGCCCGCttt     <  1:2546824/93‑1 (MQ=255)

                                                                                       cACCTCTTCCGCTGCGCATTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGCCCGCTTTCgg  >  1:3228397/1‑93 (MQ=255)

GACCGGTGCAGGTTCCGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACTTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGCCCGCTTTCGG  >  NC_000913/2429393‑2429572

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`