| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,448,171 | T→C | N147S (AAC→AGC) | b2333 ← | putative fimbrial‑like protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,448,171 | 0 | T | C | 97.0% | 411.9 / 1.9 | 135 | N147S (AAC→AGC) | b2333 | putative fimbrial‑like protein |
| Reads supporting (aligned to +/- strand): ref base T (3/1); new base C (63/68); total (66/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.58e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.37e-01 | |||||||||||
Only 100 of 138 total aligned reads displayed.
TCAAATGTCGCAGTTAAAGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGTTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACT > NC_000913/2448081‑2448260 | tCAAATGTCGCAGTTAAAGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTa > 2:2732970/1‑93 (MQ=255) cAAATGTCGCAGTTAAAGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTAt > 2:2710257/1‑93 (MQ=255) cAAATGTCGCAGTTAAAGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTAt < 2:4336353/93‑1 (MQ=255) aaaTGTCGCAGTTAAAGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTAtt < 2:1577418/93‑1 (MQ=255) aaaTGTCGCAGTTAAAGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTAtt > 1:2072958/1‑93 (MQ=255) aaaTGTCGCAGTTAAAGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTAtt < 2:4630621/93‑1 (MQ=255) aaaTGTCGCAGTTAAAGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTAtt > 1:4037431/1‑93 (MQ=255) aggTCTCAGTTAAAGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGc < 1:3091895/91‑1 (MQ=255) aTGTCGCAGTTAAAGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGc > 1:2834965/1‑93 (MQ=255) aTGTCGCAGTTAAAGAGGCGGTAAATTCACAGATCGTCAGATCACGGCCGCTTCTCGCCTGTCACCGGCATCTGAAATTGATATCGCGATTGc > 2:3851359/1‑93 (MQ=255) gTCGCAGTTAAAGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCa > 1:4553315/1‑93 (MQ=255) gTCGCAGTTAAAGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCa < 2:2853605/93‑1 (MQ=255) gTCGCAGTTAAAGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCa > 1:652715/1‑93 (MQ=255) tCGCAGTTAAAGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCAt > 1:4695355/1‑93 (MQ=255) tCGCAGTTAAAGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCAt > 2:2880094/1‑93 (MQ=255) tCGCAGTTAAAGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCAt < 1:3241860/93‑1 (MQ=255) cGCAGTTAAAGAGGCGGTAAATTCTCCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCAtt < 1:677984/93‑1 (MQ=255) gCAGTTAAAGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTGGCCAGGCTCTGAAATTGATATCGCTATTGCCATTg > 1:4097122/1‑93 (MQ=255) gCAGTTAAAGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTg > 1:1712375/1‑93 (MQ=255) gCAGTTAAAGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTg < 1:999785/93‑1 (MQ=255) aGTTAAAGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGt < 2:4733928/93‑1 (MQ=255) gTTAAAGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGtt > 1:3725777/1‑93 (MQ=255) ttAAAGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTa < 2:3888567/93‑1 (MQ=255) ttAAAGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTa < 1:3678546/93‑1 (MQ=255) ttAAAGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTa < 1:3511868/93‑1 (MQ=255) ttAAAGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTa < 2:1900841/93‑1 (MQ=255) tAAAGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAg > 2:80157/1‑93 (MQ=255) tAAAGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAg > 2:619842/1‑93 (MQ=255) tAAAGAGCAGGTCAATTCACCGATCGTCACATCACGGCCGCTTGTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAg < 2:241920/93‑1 (MQ=255) aaaGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAgc < 2:4380888/93‑1 (MQ=255) aaGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAgcg > 2:499290/1‑93 (MQ=255) agagGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAgcgc < 1:2301813/93‑1 (MQ=255) agagGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATGGCCATTGGTTAgcgc < 1:2301814/93‑1 (MQ=255) gCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAg > 1:3373101/1‑93 (MQ=255) gCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAg < 2:3812696/93‑1 (MQ=255) ggTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGt < 2:3879179/93‑1 (MQ=255) ggTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGt > 1:3090591/1‑93 (MQ=255) ggTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGt < 1:2202908/93‑1 (MQ=255) gTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTc > 2:4668722/1‑93 (MQ=255) tAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCg < 2:4591155/93‑1 (MQ=255) tAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCg > 2:2437445/1‑93 (MQ=255) aTTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGccc < 1:2960446/93‑1 (MQ=255) cACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCAt < 2:1918896/93‑1 (MQ=255) ccGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCAttt < 2:1653598/93‑1 (MQ=255) cGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTg > 1:251185/1‑93 (MQ=255) gATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGt > 1:936087/1‑93 (MQ=255) aTCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTa < 1:2981818/93‑1 (MQ=255) cGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGTTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTAtt > 1:4495777/1‑93 (MQ=255) cGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTAtt < 1:925516/93‑1 (MQ=255) gTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTAttg > 2:3714987/1‑93 (MQ=255) gTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTAttg > 2:1788391/1‑93 (MQ=255) tCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGTTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTAttgt > 1:1552403/1‑93 (MQ=255) tCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTAttgt > 2:2754862/1‑93 (MQ=255) cacaTCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTAttgtt < 1:2453861/93‑1 (MQ=255) cacaTCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTAttgtt < 2:211858/93‑1 (MQ=255) acaTCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTAttgttg > 2:3324259/1‑93 (MQ=255) acaTCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTAttgttg > 2:1688068/1‑93 (MQ=255) caTCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGa < 2:2839202/93‑1 (MQ=255) caTCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGa < 1:1156148/93‑1 (MQ=255) caTCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGa < 1:3288834/93‑1 (MQ=255) ggCCGCTTTTCGCCTGTAGCCAGGCTCCGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCaa < 2:4105896/93‑1 (MQ=255) gCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAAc > 2:3081249/1‑93 (MQ=255) cGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCt > 2:344404/1‑93 (MQ=255) gCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTg > 2:4072768/1‑93 (MQ=255) gCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTg > 1:3365123/1‑93 (MQ=255) gCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTg < 2:3433454/93‑1 (MQ=255) cTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGc < 2:771141/93‑1 (MQ=255) cTTTTCGACTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGc > 1:2706891/1‑93 (MQ=255) ttttCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCa > 2:1655928/1‑93 (MQ=255) ttttCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCa < 2:525471/93‑1 (MQ=255) ttCGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCAtt < 2:2019753/93‑1 (MQ=255) cGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCATTcc < 1:1350833/93‑1 (MQ=255) cGCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCATTcc < 1:3511380/93‑1 (MQ=255) gCCTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTATATTGTTGATGGCAACCTGCATTCCg < 1:2730950/93‑1 (MQ=255) ccTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGt < 2:1867729/93‑1 (MQ=255) ccTGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGt > 2:1223325/1‑93 (MQ=255) tGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCg > 2:4697057/1‑93 (MQ=255) tGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCg < 2:4743729/93‑1 (MQ=255) tGTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCg > 2:2209319/1‑93 (MQ=255) gTAGCCAGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCgg < 1:2994145/93‑1 (MQ=255) gCCAGGCTCTGAAATTGATATCGCTATCGCCATGGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGttt < 2:3190337/93‑1 (MQ=255) aGGCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGtttttt > 1:1799295/1‑93 (MQ=255) ggCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTc > 1:3580937/1‑93 (MQ=255) ggCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTc < 2:1556656/93‑1 (MQ=255) gCTCTGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTcc < 1:4390469/93‑1 (MQ=255) ctctGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCa < 1:3263941/93‑1 (MQ=255) tctGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCAt > 2:1722684/1‑93 (MQ=255) tctGAAATGGATATCGCTATTGCCATTGGCTAGCGCAAAGGTCGCGCCATTTGTATTGTTGATTTCAACCTGCATTCCGTCGGTTTTTTCCAt > 2:3543477/1‑93 (MQ=255) tGAAATTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGc > 2:2482066/1‑93 (MQ=255) aTTGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAAt > 1:937592/1‑93 (MQ=255) ttGATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAAtt > 1:107388/1‑93 (MQ=255) gATATCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTcc < 1:2298971/93‑1 (MQ=255) atatCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTccc > 1:1550007/1‑93 (MQ=255) atatCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTccc < 2:1080029/93‑1 (MQ=255) tatCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCa < 1:4481937/93‑1 (MQ=255) atCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCAc > 2:2922466/1‑93 (MQ=255) atCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCAc < 1:2117811/93‑1 (MQ=255) tCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACt > 1:3738481/1‑93 (MQ=255) tCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACt > 1:4632366/1‑93 (MQ=255) tCGCTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACt < 1:1506279/93‑1 (MQ=255) | TCAAATGTCGCAGTTAAAGAGGCGGTAAATTCACCGATCGTCACATCACGGCCGCTTTTCGCCTGTAGCCAGGCTCTGAAATTGATATCGTTATTGCCATTGGTTAGCGCAAAGGTCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACT > NC_000913/2448081‑2448260 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |