BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,448,289	C→T	A108T (GCA→ACA)	b2333 ←	putative fimbrial‑like protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,448,289	0	C	T	100.0%	444.2 / NA	128	A108T (GCA→ACA)	b2333	putative fimbrial‑like protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (62/66); total (62/66)

Only 100 of 135 total aligned reads displayed.

CCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGCCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAA  >  NC_000913/2448199‑2448378

ccccATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCa                                                                                          <  2:828672/93‑1 (MQ=255)

 cccATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAg                                                                                         >  2:1433260/1‑93 (MQ=255)

  ccATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGa                                                                                        >  2:1731377/1‑93 (MQ=255)

   cATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGaa                                                                                       <  2:4370858/93‑1 (MQ=255)

   cATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGaa                                                                                       <  2:1265485/93‑1 (MQ=255)

     tttGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGaaaa                                                                                     <  2:705545/93‑1 (MQ=255)

      ttGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAAc                                                                                    <  1:4577063/93‑1 (MQ=255)

        gTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCg                                                                                  <  2:1917045/93‑1 (MQ=255)

        gTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCg                                                                                  <  2:585477/93‑1 (MQ=255)

         tATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCgg                                                                                 <  2:2126474/93‑1 (MQ=255)

          aTTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGGCGTATCCAGTGTCAGAAAACCggg                                                                                >  2:3934660/1‑93 (MQ=255)

                gATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTc                                                                          >  2:1004360/1‑93 (MQ=255)

                gATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGAAGTATCCAGTGTCAGAAAACCGGGTTGTTc                                                                          <  2:4037431/93‑1 (MQ=255)

                 aTGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGATTGTTCg                                                                         >  1:4684452/1‑93 (MQ=255)

                    gCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTg                                                                      >  2:1551641/1‑93 (MQ=255)

                     cAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGt                                                                     <  2:2340172/93‑1 (MQ=255)

                     cAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGt                                                                     <  2:4451126/93‑1 (MQ=255)

                      aaCCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGtc                                                                    <  2:3695937/93‑1 (MQ=255)

                       aCCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGtct                                                                   >  2:853651/1‑93 (MQ=255)

                         cTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGtcttc                                                                 >  1:2077568/1‑93 (MQ=255)

                         cTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGtcttc                                                                 <  1:3265513/93‑1 (MQ=255)

                           gCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTa                                                               <  2:1023441/93‑1 (MQ=255)

                            cATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑c                                                             <  2:2562114/93‑1 (MQ=255)

                            cATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑c                                                             <  2:2746362/93‑1 (MQ=255)

                             aTTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑cc                                                            <  2:2560542/93‑1 (MQ=255)

                              ttCCGTCGGTTTTTTCCATGCCAATTCCCACTCGCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑ccc                                                           >  1:1827279/1‑93 (MQ=255)

                              ttCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑ccc                                                           >  1:182258/1‑93 (MQ=255)

                               tCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑cccc                                                          <  1:3324259/93‑1 (MQ=255)

                                  gTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGt                                                       >  1:2243848/1‑93 (MQ=255)

                                   tCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTg                                                      >  1:2452096/1‑93 (MQ=255)

                                   tCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTg                                                      >  2:4002896/1‑93 (MQ=255)

                                    cGGTTTTTTCCATGCCAATTTCCACTCCCTGAGCGGGTGATTAACTAACCAGTGTTAGAAAAACCGGGTGTTCGCTGTCTTTTA‑ACCCCCTGa                                                     >  2:1953736/1‑93 (MQ=255)

                                     ggTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAg                                                    >  2:4619010/1‑93 (MQ=255)

                                     ggTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAg                                                    >  2:29990/1‑93 (MQ=255)

                                     ggTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAg                                                    >  1:2161302/1‑93 (MQ=255)

                                     cgTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAg                                                    <  1:3758884/92‑1 (MQ=255)

                                       ttttttCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCg                                                  >  1:1607951/1‑93 (MQ=255)

                                         ttttCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTg                                                <  2:1639705/93‑1 (MQ=255)

                                         ttttCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTg                                                <  1:2710257/93‑1 (MQ=255)

                                             ccATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACtt                                            >  2:4475478/1‑93 (MQ=255)

                                             ccATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACtt                                            <  2:3244324/93‑1 (MQ=255)

                                              cATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACttt                                           >  1:1577542/1‑93 (MQ=255)

                                               aTGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACtttt                                          >  1:2761633/1‑93 (MQ=255)

                                                tGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGAGAGCGTGACTTTTa                                         >  2:1169582/1‑93 (MQ=255)

                                                 tgcAATTCCCCCTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTAc                                        <  1:1630683/91‑1 (MQ=255)

                                                 gCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTAc                                        <  1:2858511/93‑1 (MQ=255)

                                                  ccAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACg                                       <  1:4275511/93‑1 (MQ=255)

                                                   cAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGt                                      <  1:2880094/93‑1 (MQ=255)

                                                    aaTTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGtt                                     >  1:3912980/1‑93 (MQ=255)

                                                     aTTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTg                                    >  1:3385507/1‑93 (MQ=255)

                                                     aTTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTg                                    >  1:371781/1‑93 (MQ=255)

                                                     aTTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTg                                    >  1:2751301/1‑93 (MQ=255)

                                                       tgccACTCCACGAGCGGTTGATGACGTCACCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTa                                  <  1:3864526/91‑1 (MQ=255)

                                                       tCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTa                                  >  1:548805/1‑93 (MQ=255)

                                                       tCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTa                                  <  1:1801318/93‑1 (MQ=255)

                                                       tCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTa                                  <  2:3090591/93‑1 (MQ=255)

                                                        cccACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTAt                                 >  1:1525898/1‑93 (MQ=255)

                                                        cccACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTAt                                 >  1:1389422/1‑93 (MQ=255)

                                                         ccACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATc                                >  1:38264/1‑93 (MQ=255)

                                                          cACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATcc                               <  1:4668722/93‑1 (MQ=255)

                                                          cACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATcc                               >  1:3247184/1‑93 (MQ=255)

                                                          cACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCACGTGAGCGTGGCTTTTACGTTGTAttc                               >  1:2663096/1‑91 (MQ=255)

                                                            cTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCccg                             >  1:380582/1‑93 (MQ=255)

                                                            cTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGCGAGCGTGACTTTTACGTTGTATCccg                             >  2:236071/1‑93 (MQ=255)

                                                             tCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTATGTTGTATCccgc                            >  1:3675619/1‑93 (MQ=255)

                                                             tCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCccgc                            >  2:2631541/1‑93 (MQ=255)

                                                             tCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCccgc                            >  2:2267261/1‑93 (MQ=255)

                                                             ccccTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCccgc                            <  1:2364382/92‑1 (MQ=255)

                                                              cccTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCccgcc                           >  2:1577116/1‑93 (MQ=255)

                                                              cccTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCccgcc                           >  1:3209282/1‑93 (MQ=255)

                                                              cccTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCccgcc                           >  2:718817/1‑93 (MQ=255)

                                                              cccTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCccgcc                           <  2:907216/93‑1 (MQ=255)

                                                               ccTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCccgccg                          >  1:1138382/1‑93 (MQ=255)

                                                                 tGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGc                        <  1:2175021/93‑1 (MQ=255)

                                                                 tGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGc                        >  1:2640275/1‑93 (MQ=255)

                                                                    gCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCt                     <  1:3391933/93‑1 (MQ=255)

                                                                    gCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCt                     <  2:377928/93‑1 (MQ=255)

                                                                    gCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCt                     <  2:377929/93‑1 (MQ=255)

                                                                     cGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCtt                    <  1:1433260/93‑1 (MQ=255)

                                                                      ggTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCttt                   <  2:2393211/93‑1 (MQ=255)

                                                                      ggTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCttt                   <  2:4442671/93‑1 (MQ=255)

                                                                       gTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTg                  <  1:3993921/93‑1 (MQ=255)

                                                                        ttGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGc                 <  2:937592/93‑1 (MQ=255)

                                                                        ttGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGc                 <  2:1425874/93‑1 (MQ=255)

                                                                            tgaCGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATc             <  2:251185/93‑1 (MQ=255)

                                                                            tgaCGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATc             >  1:2884183/1‑93 (MQ=255)

                                                                            tgaCGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATc             >  1:2884182/1‑93 (MQ=255)

                                                                             gaCGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCt            <  1:452900/93‑1 (MQ=255)

                                                                             gaCGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCt            >  1:1994717/1‑93 (MQ=255)

                                                                             gaCGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCt            >  1:1994718/1‑93 (MQ=255)

                                                                              aCGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCCATCtt           >  1:1145679/1‑93 (MQ=255)

                                                                              aCGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCtt           <  2:3373101/93‑1 (MQ=255)

                                                                               cGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCttt          >  2:1142443/1‑93 (MQ=255)

                                                                                gTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTc         >  2:1201127/1‑93 (MQ=255)

                                                                                 tATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCa        >  2:4465834/1‑93 (MQ=255)

                                                                                   tCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGc      <  2:3420919/93‑1 (MQ=255)

                                                                                    ccAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGc      >  1:1054620/1‑93 (MQ=255)

                                                                                    ccAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCt     <  2:833121/93‑1 (MQ=255)

                                                                                      aGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTa   <  2:2635153/93‑1 (MQ=255)

                                                                                       gtgtCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTaa  <  2:2316101/93‑1 (MQ=255)

CCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGCCAGAAAACCGGGTTGTTCGCTGTCTTCTA‑CCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAA  >  NC_000913/2448199‑2448378

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`