BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	307,684	T→C	L291L (TTA→TTG)	yagX ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	307,684	0	T	C	100.0%	341.8 / NA	105	L291L (TTA→TTG)	yagX	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (53/52); total (53/52)

Only 100 of 114 total aligned reads displayed.

CCGGGTATCCACTTCATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGTAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCGTAAATCTTCCC  >  NC_000913/307594‑307773

ccGGGTATCCACTTCATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCaa                                                                                         >  2:1559791/1‑93 (MQ=255)

   ggTATCCACTTCATGATTGCCCATAGTGAAGTTCTGAGCGCTTAGTAGCCGCCCATCGCGGGTGAGATGTACTTCGCCCGCCGCCGGCaaaaa                                                                                      <  2:4151001/93‑1 (MQ=255)

   ggTATCCACTTCATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCaaaaa                                                                                      >  1:3132697/1‑93 (MQ=255)

     tATCCACTTCATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAgg                                                                                    <  1:730799/93‑1 (MQ=255)

      aTCCACTTCATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGc                                                                                   <  1:2610911/93‑1 (MQ=255)

       tCCACTTCATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCg                                                                                  <  1:1034934/93‑1 (MQ=255)

        ccACTTCATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGa                                                                                 >  2:361058/1‑93 (MQ=255)

        ccACTTCATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGa                                                                                 >  1:4504021/1‑93 (MQ=255)

         cACTTCATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGAt                                                                                <  1:4131388/93‑1 (MQ=255)

         cACTTCATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGAt                                                                                >  1:3288194/1‑93 (MQ=255)

          aCTTCATGATTGCCCATAGTG‑AGTTCTGAACGCTTAGTAGCCCCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCa                                                                              <  2:3221612/93‑1 (MQ=255)

             tCATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACt                                                                            >  1:4573699/1‑93 (MQ=255)

              cATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTg                                                                           <  1:1554819/93‑1 (MQ=255)

              cATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTg                                                                           <  2:173736/93‑1 (MQ=255)

               aTGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCAGGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTgg                                                                          <  1:1532844/93‑1 (MQ=255)

               aTGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTgg                                                                          >  2:2328964/1‑93 (MQ=255)

                tGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGc                                                                         >  2:346665/1‑93 (MQ=255)

                 gATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCg                                                                        <  1:496163/93‑1 (MQ=255)

                 gATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGCGAGATGTACTTCGCCCGCCGCCGGCAAAAAGACGATCACTGGCg                                                                        >  1:658083/1‑93 (MQ=255)

                  aTTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCGCTGGCGt                                                                       <  2:2402024/93‑1 (MQ=255)

                  aTTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGt                                                                       <  2:3214085/93‑1 (MQ=255)

                   ttGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTg                                                                      >  1:3436097/1‑93 (MQ=255)

                      cccATAGTGAAGTTTTGAACGCTTAGTACCCGCCCATCACGGGTGATTTGTGCTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCt                                                                   <  2:1078423/93‑1 (MQ=255)

                      cccATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCt                                                                   <  1:306226/93‑1 (MQ=255)

                      cccATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCt                                                                   >  1:2773631/1‑93 (MQ=255)

                      cccATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGGGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCt                                                                   >  1:1530554/1‑93 (MQ=255)

                       ccATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTg                                                                  >  1:2748920/1‑93 (MQ=255)

                        cATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTgg                                                                 >  1:1175223/1‑92 (MQ=255)

                        cATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGa                                                                 >  1:748139/1‑93 (MQ=255)

                        cATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGa                                                                 >  1:1496037/1‑93 (MQ=255)

                         aTAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGAc                                                                >  2:3732229/1‑93 (MQ=255)

                            gTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTgg                                                             >  2:739140/1‑93 (MQ=255)

                            gTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTgg                                                             >  2:4129508/1‑93 (MQ=255)

                              gAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGgct                                                           <  1:3781536/93‑1 (MQ=255)

                               aaGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGgctg                                                          <  1:1165560/93‑1 (MQ=255)

                                aGTTCTGAACGCTTAGTAGCCGCCCATCACGGGGGAGATGTACTTCGCCCGCTGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGgctgt                                                         >  2:3055474/1‑92 (MQ=255)

                                aGTTCTGAACCCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGgctgc                                                         <  1:3705345/93‑1 (MQ=255)

                                 gTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGgctgct                                                        <  1:3805971/93‑1 (MQ=255)

                                     tGACCGCTTAGTGGCCGCCCATACCGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCg                                                    <  2:4343749/93‑1 (MQ=255)

                                     tGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCg                                                    >  2:539641/1‑93 (MQ=255)

                                      gAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCACAAAGGCGATCACTGGCGTGGCTGACTGGCTCCTGTcca                                                   >  2:138408/1‑91 (MQ=255)

                                       aaCGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGaa                                                  >  1:238780/1‑93 (MQ=255)

                                         cGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGa                                                <  1:2511337/93‑1 (MQ=255)

                                         cGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGa                                                <  1:3712443/93‑1 (MQ=255)

                                          gCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGGCTGGCTGCTGTCGAAGAt                                               >  2:54247/1‑93 (MQ=255)

                                          gCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGAt                                               <  1:77534/93‑1 (MQ=255)

                                          gCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGAt                                               <  1:4422307/93‑1 (MQ=255)

                                           cTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGAtg                                              >  2:1185316/1‑93 (MQ=255)

                                            ttAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGAtgg                                             >  1:2694312/1‑93 (MQ=255)

                                            ttAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGAtgg                                             >  2:3525969/1‑93 (MQ=255)

                                            ttAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGCCGTGCCTGACTGGCTGCTGTCGAAGAtgt                                             >  2:3629899/1‑92 (MQ=255)

                                             tagtagCCGCCCATCACGGGTGACATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGAtggt                                            <  2:2582052/93‑1 (MQ=255)

                                             tagtagCCGCCCATCACGGGTGACATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGAtggt                                            <  2:2582051/93‑1 (MQ=255)

                                              agtagCCGCCCATAACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGAtggtg                                           <  1:3580105/93‑1 (MQ=255)

                                                tagCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGa                                         >  1:4553187/1‑93 (MQ=255)

                                                tagCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGa                                         >  1:4553186/1‑93 (MQ=255)

                                                tagCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGa                                         >  1:2304543/1‑93 (MQ=255)

                                                 ggccgccGATCGCGGTGGAGATGTCCGCCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGCCTGGCTGCTGTCGAAGATGGTGGAg                                        <  2:2841779/92‑1 (MQ=255)

                                                 agCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAg                                        >  1:1399428/1‑93 (MQ=255)

                                                 agCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAg                                        >  1:3126414/1‑93 (MQ=255)

                                                 agCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAg                                        <  2:2841780/93‑1 (MQ=255)

                                                    cgccCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTACTGTCGAAGATGGTGGAGCTg                                     <  2:3361852/93‑1 (MQ=255)

                                                     gccCATCACGGGTGAGTTGTACTTTGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGGGGCTGACAGGCTGCTGTCGAAGATGGGTGAGCTgg                                    >  2:4204341/1‑93 (MQ=255)

                                                     gccCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTgg                                    >  1:974999/1‑93 (MQ=255)

                                                        cATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCt                                 >  2:2609219/1‑93 (MQ=255)

                                                        cATCACGGGGGAGATGTACTTCGCCCGCCGCCGGAAAAAAGGCGATCACTGGCGGGGCTGACCGGCTGCTGTCGAAGATGGTGgggctgggct                                 >  2:4055401/1‑93 (MQ=255)

                                                         aacccGGGGGATATGCATTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTg                                <  2:3967619/89‑1 (MQ=255)

                                                          tCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTgg                               >  1:3956174/1‑93 (MQ=255)

                                                          tCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTgg                               >  2:2377024/1‑93 (MQ=255)

                                                          tCACGGGGGAGATGTCCTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTgg                               <  1:903836/93‑1 (MQ=255)

                                                           caggggTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGt                              <  1:1328324/90‑1 (MQ=255)

                                                           cACGGGTGAGATGTCCTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGt                              <  1:1271363/93‑1 (MQ=255)

                                                           cACGGGCGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGt                              >  2:2105988/1‑93 (MQ=255)

                                                            aCGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGtt                             >  1:1366120/1‑93 (MQ=255)

                                                              gggTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTc                           >  2:2421043/1‑93 (MQ=255)

                                                              gggTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTc                           <  2:206886/93‑1 (MQ=255)

                                                               ggTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTcc                          >  2:3721660/1‑93 (MQ=255)

                                                                gTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTccc                         <  2:587433/93‑1 (MQ=255)

                                                                   agaTGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAg                      <  2:4124188/93‑1 (MQ=255)

                                                                    gaTGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAgg                     >  2:3226961/1‑93 (MQ=255)

                                                                    gaTGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTCGCCTGGTTTCCCCAgg                     >  1:3036587/1‑93 (MQ=255)

                                                                      tGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGGTGGTGGAGCTGGCCTGGTTTCCCCAGGaa                   >  2:3996944/1‑93 (MQ=255)

                                                                      tGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTTCCCAGGaa                   >  2:2756102/1‑93 (MQ=255)

                                                                      tGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGaa                   >  2:2358415/1‑93 (MQ=255)

                                                                       gttcTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGaaa                  <  2:4023051/90‑1 (MQ=255)

                                                                        tACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAg                 >  2:516105/1‑93 (MQ=255)

                                                                         aCTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAgg                <  2:2242084/93‑1 (MQ=255)

                                                                          ctgcgcccgccGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGc               <  2:629213/90‑1 (MQ=255)

                                                                                ccgccgccgGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCGTaaa         >  1:1955120/1‑93 (MQ=255)

                                                                                ccgccgccgGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCGTaaa         <  1:3160030/93‑1 (MQ=255)

                                                                                  gccgccgGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCGTAAATc       <  2:2096584/93‑1 (MQ=255)

                                                                                  gccgccgGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCGTAAATc       >  1:64583/1‑93 (MQ=255)

                                                                                  cccgccgGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCGTAAATc       <  1:3787126/92‑1 (MQ=255)

                                                                                   ccgccgGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCGTAAATCt      >  1:2702523/1‑93 (MQ=255)

                                                                                    cgccgGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCGTAAATCtt     >  2:3506725/1‑93 (MQ=255)

                                                                                    cgccgGCAAAAAGGCGATCACTGGCGTGACTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCGTAAATCtt     >  2:365618/1‑93 (MQ=255)

                                                                                     gccgGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCGTAAATCTTc    <  2:589238/93‑1 (MQ=255)

                                                                                     gccgGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGGGGAGCTGGCCTGGGTTCCCCAGGAAAGGCCGTAAATCTTc    >  1:2586460/1‑93 (MQ=255)

                                                                                      ccgGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCGTAAATCTTcc   <  1:1185316/93‑1 (MQ=255)

                                                                                       cgGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCGTAAATCTTccc  <  1:3836244/93‑1 (MQ=255)

CCGGGTATCCACTTCATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGTAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCGTAAATCTTCCC  >  NC_000913/307594‑307773

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`