Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,590,989 T→C intergenic (+7/+103) b4537 → / ← ypfH hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,590,9890TC97.4% 486.4 / 0.4 157intergenic (+7/+103)b4537/ypfHhypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (1/3);  new base C (87/65);  total (89/68)
Fisher's exact test for biased strand distribution p-value = 3.18e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01

Only 100 of 167 total aligned reads displayed.

CCGGAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCA  >  NC_000913/2590899‑2591078
                                                                                          |                                                                                         
ccGGAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAgcgc                                                                                         <  2:4074130/93‑1 (MQ=255)
 cGGAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCt                                                                                        <  1:4154304/93‑1 (MQ=255)
   gAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCa                                                                                      <  2:3618373/93‑1 (MQ=255)
   gAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCa                                                                                      >  1:2802201/1‑93 (MQ=255)
   gAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCa                                                                                      >  2:1051551/1‑93 (MQ=255)
     gCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAAc                                                                                    >  1:4382046/1‑93 (MQ=255)
      cTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAAcc                                                                                   >  1:3786504/1‑93 (MQ=255)
      cTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAAcc                                                                                   <  2:3315326/93‑1 (MQ=255)
       ttCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCg                                                                                  <  2:3093462/93‑1 (MQ=255)
       ttCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCg                                                                                  >  1:3064695/1‑93 (MQ=255)
        tCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGt                                                                                 >  2:4581514/1‑93 (MQ=255)
        tCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGt                                                                                 >  1:4439534/1‑93 (MQ=255)
         ccccccCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTa                                                                                <  2:501043/93‑1 (MQ=255)
           cccGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAgg                                                                              <  1:1489596/93‑1 (MQ=255)
           cccGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAgg                                                                              <  1:4331407/93‑1 (MQ=255)
           cccGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAgg                                                                              >  1:1959947/1‑93 (MQ=255)
            ccGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGc                                                                             >  2:4594390/1‑93 (MQ=255)
            ccGCATCGTGATTTCAACGATAAGAGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGc                                                                             >  2:2243499/1‑93 (MQ=255)
             cGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGcc                                                                            <  1:3552190/93‑1 (MQ=255)
              gCATCGTGCTTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCg                                                                           >  2:813174/1‑93 (MQ=255)
              gCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAATTAAGATGAGCGCTCAACCGTAGGCCg                                                                           >  2:1554861/1‑93 (MQ=255)
               cATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCACCCATATGCCgg                                                                          >  1:3866583/1‑93 (MQ=255)
                aTCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGa                                                                         >  1:2197985/1‑93 (MQ=255)
                aTCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGa                                                                         >  2:1894505/1‑93 (MQ=255)
                aTCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGa                                                                         >  1:1617649/1‑93 (MQ=255)
                   gTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATaa                                                                      <  1:3693248/93‑1 (MQ=255)
                   gTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATaa                                                                      <  2:2809434/93‑1 (MQ=255)
                   gTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATaa                                                                      <  1:1694053/93‑1 (MQ=255)
                   gTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATaa                                                                      >  2:126704/1‑93 (MQ=255)
                      aTTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGc                                                                   <  2:4229987/93‑1 (MQ=255)
                      aTTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGc                                                                   >  1:1263694/1‑93 (MQ=255)
                      aTTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGc                                                                   >  2:1258644/1‑93 (MQ=255)
                           aaCGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTaa                                                              <  1:3346112/93‑1 (MQ=255)
                           aaCGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTaa                                                              >  2:1798956/1‑93 (MQ=255)
                            aCGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAAc                                                             <  1:2871878/93‑1 (MQ=255)
                            aCGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAAc                                                             >  1:3889396/1‑93 (MQ=255)
                             cGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTaaac                                                            >  2:3462778/1‑91 (MQ=255)
                             cGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAAcg                                                            <  2:3902577/93‑1 (MQ=255)
                              gATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAAcgc                                                           <  1:1564398/93‑1 (MQ=255)
                               aTAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAAcgcc                                                          >  1:1260159/1‑93 (MQ=255)
                                 aaGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAAcgccgc                                                        >  2:1172412/1‑93 (MQ=255)
                                   gTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCAt                                                      >  1:2565253/1‑93 (MQ=255)
                                    tGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATc                                                     <  1:504450/93‑1 (MQ=255)
                                    tGGGACGATGACGACGACTGGCATAAAAAGAATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATc                                                     <  2:3242900/93‑1 (MQ=255)
                                       gACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCgg                                                  <  2:2443550/93‑1 (MQ=255)
                                        aCGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGc                                                 >  2:56571/1‑93 (MQ=255)
                                          gATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCaa                                               >  1:2884212/1‑93 (MQ=255)
                                          gATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCaa                                               <  1:1526416/93‑1 (MQ=255)
                                            tGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATg                                             <  1:44806/93‑1 (MQ=255)
                                            tGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATg                                             >  1:3083062/1‑93 (MQ=255)
                                            tGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATg                                             >  2:3372/1‑93 (MQ=255)
                                            tGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATg                                             >  1:2723218/1‑93 (MQ=255)
                                              acgacgacTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGt                                           >  2:4472718/1‑93 (MQ=255)
                                                gacgacTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGa                                         >  1:2836335/1‑93 (MQ=255)
                                                    acTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGa                                     >  1:4230022/1‑93 (MQ=255)
                                                     cTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGAGTTACCGCCGCATCCGGCAATGGTGAACGAt                                    >  2:2789020/1‑93 (MQ=255)
                                                        gCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGcc                                 >  2:1382570/1‑93 (MQ=255)
                                                           gAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGa                              >  1:1487389/1‑93 (MQ=255)
                                                            aaaaaGGATCAACCGAAGAAGTAAGCTGAGCGCTCAGCCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGAt                             <  1:410808/93‑1 (MQ=255)
                                                            aaaaaGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGAt                             <  2:701398/93‑1 (MQ=255)
                                                            aaaaaGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGAt                             >  1:1012802/1‑93 (MQ=255)
                                                              aaaGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGc                           >  2:3454838/1‑93 (MQ=255)
                                                               aaGGATCAACCGAAGAAGTAAGCCGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCg                          >  2:1419926/1‑93 (MQ=255)
                                                                aGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGa                         <  1:2252014/93‑1 (MQ=255)
                                                                aGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGa                         >  1:2862033/1‑93 (MQ=255)
                                                                aGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGa                         <  1:3174220/93‑1 (MQ=255)
                                                                 ggATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGAc                        <  2:4324724/93‑1 (MQ=255)
                                                                 ggATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGAc                        <  1:1458524/93‑1 (MQ=255)
                                                                 ggATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGAc                        >  2:2634976/1‑93 (MQ=255)
                                                                  gaccAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCTTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACg                       <  2:879021/90‑1 (MQ=255)
                                                                  gATCAACCGAAGAAGTAAGCTGAGTGCTCAGCCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACg                       <  1:2077371/93‑1 (MQ=255)
                                                                  gATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACg                       >  1:4602161/1‑93 (MQ=255)
                                                                   aTCAACCGAAGAAGGAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGc                      <  2:758541/93‑1 (MQ=255)
                                                                    tCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCt                     >  2:460876/1‑93 (MQ=255)
                                                                     cAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTc                    <  1:183919/93‑1 (MQ=255)
                                                                      aaCCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCa                   <  1:2925259/93‑1 (MQ=255)
                                                                       aCCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAc                  <  2:3736972/93‑1 (MQ=255)
                                                                        ccGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAcg                 <  1:2457384/93‑1 (MQ=255)
                                                                         cGAGGAAGTAAGCTGAGTGCTCAACCGAAGGCCGAATAAGGCGTTAACGCCGCATCGGGCAATGGTGAGCGAGGCCTGATGCGACGCTCgcgc                <  2:1279366/93‑1 (MQ=21)
                                                                         cGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAcgc                <  2:857465/93‑1 (MQ=255)
                                                                          gaagaaGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAcgcg               >  1:748597/1‑93 (MQ=255)
                                                                          gaagaaGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAcgcg               >  1:1091208/1‑93 (MQ=255)
                                                                              aagTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCtt           >  1:1037673/1‑93 (MQ=255)
                                                                               agTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTa          >  1:3674123/1‑93 (MQ=255)
                                                                                 tAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATc        <  1:1782977/93‑1 (MQ=255)
                                                                                 tAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATc        >  1:256006/1‑93 (MQ=255)
                                                                                 tAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATc        >  1:3405230/1‑93 (MQ=255)
                                                                                 tAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATc        <  2:2470477/93‑1 (MQ=255)
                                                                                 tAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATc        <  2:3963688/93‑1 (MQ=255)
                                                                                 tAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATc        <  2:1695696/93‑1 (MQ=255)
                                                                                   aGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAg      >  1:2293512/1‑93 (MQ=255)
                                                                                   aGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAg      >  1:687013/1‑93 (MQ=255)
                                                                                   aGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAg      <  1:848939/93‑1 (MQ=255)
                                                                                   aGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAg      <  2:1463565/93‑1 (MQ=255)
                                                                                    gCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAgg     <  2:2028190/93‑1 (MQ=255)
                                                                                     cTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGc    <  2:3590279/93‑1 (MQ=255)
                                                                                     cTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGc    <  2:2043377/93‑1 (MQ=255)
                                                                                      tGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGcc   <  1:2056965/93‑1 (MQ=255)
                                                                                       gAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCa  >  1:4094122/1‑93 (MQ=255)
                                                                                       gAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCa  >  2:4713351/1‑93 (MQ=255)
                                                                                          |                                                                                         
CCGGAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCA  >  NC_000913/2590899‑2591078

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: