BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,647,298	T→C	T1004A (ACG→GCG)	b2520 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,647,298	0	T	C	98.8%	524.8 / ‑5.4	166	T1004A (ACG→GCG)	b2520	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (97/67); total (98/68)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 176 total aligned reads displayed.

CACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCG  >  NC_000913/2647208‑2647387

cgcTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGccc                                                                                         <  1:152525/91‑1 (MQ=255)

cACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGccc                                                                                         >  1:1222096/1‑93 (MQ=255)

cACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGccc                                                                                         <  2:227632/93‑1 (MQ=255)

 aCTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCa                                                                                        >  2:4109042/1‑93 (MQ=255)

  cTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACTGAAGTCATCTGCCGCCCAg                                                                                       >  2:364469/1‑93 (MQ=255)

  cTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAg                                                                                       >  1:3948593/1‑93 (MQ=255)

  cTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAg                                                                                       <  1:1979033/93‑1 (MQ=255)

  cTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAg                                                                                       <  1:2864760/93‑1 (MQ=255)

   tCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAgg                                                                                      >  2:870442/1‑93 (MQ=255)

   tCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAgg                                                                                      >  1:4471385/1‑93 (MQ=255)

   tCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAgg                                                                                      >  1:4659481/1‑93 (MQ=255)

     gCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCt                                                                                    <  2:568683/93‑1 (MQ=255)

     gCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCt                                                                                    <  1:1722422/93‑1 (MQ=255)

        aTAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTgc                                                                                 >  1:3442986/1‑93 (MQ=255)

            aGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCa                                                                             <  1:2333776/93‑1 (MQ=255)

            aGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCa                                                                             >  1:2698341/1‑93 (MQ=255)

            aGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCa                                                                             >  2:2542566/1‑93 (MQ=255)

             gcgcGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCAt                                                                            <  2:2518743/93‑1 (MQ=255)

              cgcgGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATg                                                                           <  1:4395252/93‑1 (MQ=255)

              cgcgGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATg                                                                           <  1:1017531/93‑1 (MQ=255)

               gcgGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGa                                                                          <  1:2262269/93‑1 (MQ=255)

               gcgGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGa                                                                          >  2:567728/1‑93 (MQ=255)

               gcgGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGa                                                                          <  1:3875516/93‑1 (MQ=255)

                 ggCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGAcg                                                                        >  1:3768046/1‑93 (MQ=255)

                   cATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGAcgcg                                                                      >  1:4545621/1‑93 (MQ=255)

                     tGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGTCTTGCGCCATGACGCGCa                                                                    >  1:20939/1‑93 (MQ=255)

                     tGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGAcgcgaa                                                                    >  2:2190197/1‑91 (MQ=255)

                     tGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCa                                                                    >  2:4040363/1‑93 (MQ=255)

                     tGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCa                                                                    <  2:2681391/93‑1 (MQ=255)

                     cgttcagttcaGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCa                                                                    >  2:3038017/2‑93 (MQ=255)

                       ttcagttcagCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAAt                                                                  >  1:3069008/1‑93 (MQ=255)

                       ttcagttcagCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGAAAt                                                                  >  2:697169/1‑93 (MQ=255)

                        tcagttcagCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAAtt                                                                 <  2:211629/93‑1 (MQ=255)

                        tcagttcagCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAAtt                                                                 >  2:1759546/1‑93 (MQ=255)

                           gttcagCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCAc                                                              <  2:4267790/93‑1 (MQ=255)

                           gttcagCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCAc                                                              >  1:4702355/1‑93 (MQ=255)

                           gttcagCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCAc                                                              <  2:4717270/93‑1 (MQ=255)

                             tcagCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCg                                                            <  2:2137848/93‑1 (MQ=255)

                             tcagCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCg                                                            <  1:1933906/93‑1 (MQ=255)

                                gCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTa                                                         >  1:69986/1‑93 (MQ=255)

                                   aTCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTaaaa                                                      >  1:2350882/1‑93 (MQ=255)

                                   aTCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTaaaa                                                      >  1:1205227/1‑93 (MQ=255)

                                   aTCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTaaaa                                                      >  2:4241008/1‑93 (MQ=255)

                                      cccGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCg                                                   <  2:2635087/92‑1 (MQ=255)

                                      aCCGGTGCGGCAACTATCCCTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCg                                                   <  2:4492889/93‑1 (MQ=255)

                                         ggTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCa                                                >  1:1950111/1‑93 (MQ=255)

                                          gTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCaa                                               <  1:4619743/93‑1 (MQ=255)

                                          gTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCaa                                               <  2:2458660/93‑1 (MQ=255)

                                           tGCGGCACCTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAAt                                              <  2:1426000/93‑1 (MQ=255)

                                           tGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAAt                                              >  2:841485/1‑93 (MQ=255)

                                            gCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATc                                             <  1:3703134/93‑1 (MQ=255)

                                            gCGGCAACTATCACTTTACTTTAGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATc                                             <  2:1480658/93‑1 (MQ=255)

                                              ggCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCgg                                           >  1:391114/1‑93 (MQ=255)

                                               gCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGc                                          >  1:566788/1‑93 (MQ=255)

                                                cAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCa                                         <  2:4454531/93‑1 (MQ=255)

                                                  aCTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAgt                                       <  1:3823828/93‑1 (MQ=255)

                                                  aCTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAgt                                       >  1:1524694/1‑93 (MQ=255)

                                                    tATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAgtgt                                     >  1:853813/1‑93 (MQ=255)

                                                    tATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTAGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAgtgt                                     >  2:2809698/1‑93 (MQ=255)

                                                      tCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTaa                                   <  2:2206512/93‑1 (MQ=255)

                                                       ctcttgactctCCTAGCTAGCGAATTCAGCTGCCGCCCAGGCTTGCCCCAGGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAAc                                  <  2:2346042/91‑1 (MQ=255)

                                                       cACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAAc                                  <  2:3858579/93‑1 (MQ=255)

                                                        actttactttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAAcc                                 <  1:3266267/93‑1 (MQ=255)

                                                         ctttactttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCg                                >  1:1376941/1‑93 (MQ=255)

                                                          tttactttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGa                               >  2:3609341/1‑93 (MQ=255)

                                                          tttactttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGa                               <  2:787091/93‑1 (MQ=255)

                                                          tttactttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGa                               >  2:3609340/1‑93 (MQ=255)

                                                           ttactttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGac                              >  1:1387504/1‑92 (MQ=255)

                                                             actttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGcc                            >  1:1246315/1‑93 (MQ=255)

                                                             actttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGcc                            >  1:3480054/1‑93 (MQ=255)

                                                              ctttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCt                           <  2:2848631/93‑1 (MQ=255)

                                                              ctttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCt                           <  1:687977/93‑1 (MQ=255)

                                                              ctttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCt                           <  2:435346/93‑1 (MQ=255)

                                                               tttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCtt                          >  2:1578823/1‑93 (MQ=255)

                                                               tttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCtt                          >  2:1244885/1‑93 (MQ=255)

                                                               tttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCtt                          >  1:3350775/1‑93 (MQ=255)

                                                                ttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTc                         <  1:4161389/93‑1 (MQ=255)

                                                                     tGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCt                    <  2:723269/93‑1 (MQ=255)

                                                                      gCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTg                   >  2:945094/1‑93 (MQ=255)

                                                                       cTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGt                  <  1:1551733/93‑1 (MQ=255)

                                                                         aCCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTc                >  2:1102340/1‑93 (MQ=255)

                                                                         aCCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTc                <  1:4196352/93‑1 (MQ=255)

                                                                          ccGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATTGCCAATCGGCAGTGTAAGCGAGCCTTCGCCCTGCTCg               >  2:1855920/1‑93 (MQ=255)

                                                                          ccGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCg               >  1:2009235/1‑93 (MQ=255)

                                                                           cGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGt              >  2:1401772/1‑93 (MQ=255)

                                                                            gAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTTAAATCGCCAATCGGCAGGGTAACCGAGCCTTCGCCCTGTTCGtt             >  2:2772340/1‑93 (MQ=255)

                                                                             aaagcATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTg            <  1:1107282/89‑1 (MQ=255)

                                                                             aaGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTg            >  1:886640/1‑93 (MQ=255)

                                                                              aGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGCGCGTTCGCCCTGTTCGttag           >  1:3521971/1‑91 (MQ=255)

                                                                               gTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAg          >  1:109963/1‑93 (MQ=255)

                                                                               gTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAg          >  1:544328/1‑93 (MQ=255)

                                                                                tCATCTGCCGCCCAGGCTTGCTCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGc         <  1:1081529/93‑1 (MQ=255)

                                                                                  aTCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGt       >  2:2120241/1‑93 (MQ=255)

                                                                                   tCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGtt      <  1:4663680/93‑1 (MQ=255)

                                                                                   tCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGtt      >  2:2718764/1‑93 (MQ=255)

                                                                                    cTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTa     >  1:249139/1‑93 (MQ=255)

                                                                                     tGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTAc    <  1:2784498/93‑1 (MQ=255)

                                                                                     tGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTAc    >  1:2893893/1‑93 (MQ=255)

                                                                                      gccgccCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTAcc   <  2:76075/93‑1 (MQ=255)

                                                                                      gccgccCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTAcc   <  1:1118070/93‑1 (MQ=255)

CACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCG  >  NC_000913/2647208‑2647387

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`