BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,732,197	T→C	intergenic (‑4/+126)	clpB ← / ← yfiH	ClpB/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,732,197	0	T	C	100.0%	519.4 / NA	157	intergenic (‑4/+126)	clpB/yfiH	ClpB/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (86/71); total (86/71)

Only 100 of 163 total aligned reads displayed.

GATAAATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACTCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAG  >  NC_000913/2732107‑2732286

gATAAATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAAcccc                                                                                         <  1:4725445/93‑1 (MQ=255)

   aaaTTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACccctcc                                                                                      <  2:623504/93‑1 (MQ=255)

   aaaTTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACccctcc                                                                                      <  1:2370745/93‑1 (MQ=255)

    aaTTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTccc                                                                                     >  2:4444273/1‑93 (MQ=255)

      ttGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCAt                                                                                   >  1:2225202/1‑93 (MQ=255)

        ggTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATaa                                                                                 >  2:4454752/1‑93 (MQ=255)

         gTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAAc                                                                                >  2:2063454/1‑93 (MQ=255)

          ttGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACg                                                                               >  1:1237303/1‑93 (MQ=255)

            gTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGa                                                                             <  1:4297355/93‑1 (MQ=255)

               gTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCa                                                                          >  2:88615/1‑93 (MQ=255)

               gTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCa                                                                          <  1:423248/93‑1 (MQ=255)

                tGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCaa                                                                         >  2:2210039/1‑93 (MQ=255)

                tGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCaa                                                                         >  1:1278427/1‑93 (MQ=255)

                tGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCaa                                                                         >  1:1423453/1‑93 (MQ=255)

                tGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCaa                                                                         <  1:2620541/93‑1 (MQ=255)

                tGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCaa                                                                         <  2:664832/93‑1 (MQ=255)

                tGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTCGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCaa                                                                         <  1:3292805/93‑1 (MQ=255)

                   ccGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGt                                                                      <  2:1969926/93‑1 (MQ=255)

                   ccGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGt                                                                      <  2:4265002/93‑1 (MQ=255)

                   ccGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGt                                                                      >  1:283225/1‑93 (MQ=255)

                    cGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGtt                                                                     >  1:4536077/1‑93 (MQ=255)

                      aGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGc                                                                   <  1:4573608/93‑1 (MQ=255)

                      aGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGc                                                                   >  1:3754726/1‑93 (MQ=255)

                      aGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGc                                                                   >  1:4066637/1‑93 (MQ=255)

                        tGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTa                                                                 >  1:2237978/1‑93 (MQ=255)

                         gCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTAc                                                                >  2:1248356/1‑93 (MQ=255)

                          cAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACt                                                               <  1:486056/93‑1 (MQ=255)

                            aGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTgg                                                             <  2:1876522/93‑1 (MQ=255)

                            aGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTgg                                                             >  2:497288/1‑93 (MQ=255)

                             gTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGga                                                            <  1:1371008/93‑1 (MQ=255)

                             gTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGga                                                            <  1:1025686/93‑1 (MQ=255)

                               gATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGgaga                                                          <  2:4636800/93‑1 (MQ=255)

                                aTTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGAt                                                         >  2:3873253/1‑93 (MQ=255)

                                 ttGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGAtt                                                        >  1:1982118/1‑93 (MQ=255)

                                 ttGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGAtt                                                        <  1:1843245/93‑1 (MQ=255)

                                   gggCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTTCTACTGGAGATTaa                                                      <  1:3513631/93‑1 (MQ=255)

                                   gggCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTaa                                                      >  1:207568/1‑93 (MQ=255)

                                     gCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGGCGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAAt                                                    <  1:1332225/93‑1 (MQ=255)

                                        tCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAg                                                 <  2:440269/93‑1 (MQ=255)

                                        tCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAg                                                 <  2:2338431/93‑1 (MQ=255)

                                        tCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAg                                                 >  1:540419/1‑93 (MQ=255)

                                         cGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAgg                                                <  2:4615014/93‑1 (MQ=255)

                                         cGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAgg                                                <  2:1229976/93‑1 (MQ=255)

                                         cGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAgg                                                <  1:2200070/93‑1 (MQ=255)

                                         cGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAgg                                                >  1:3027852/1‑93 (MQ=255)

                                         cGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAgg                                                >  1:3027851/1‑93 (MQ=255)

                                          ggCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGt                                               >  1:2207835/1‑93 (MQ=255)

                                           gCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTc                                              <  2:3409093/93‑1 (MQ=255)

                                             aaGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCACAGTTGCTACTCGAGATTAAATGAGGTCAt                                            >  2:118603/1‑93 (MQ=255)

                                             aaGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCAt                                            <  2:761809/93‑1 (MQ=255)

                                             aaGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCAt                                            >  2:605251/1‑93 (MQ=255)

                                              agagCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATc                                           >  1:3529683/1‑93 (MQ=255)

                                                agCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATccc                                         >  1:1534212/1‑93 (MQ=255)

                                                   aaGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCa                                      >  2:591116/1‑93 (MQ=255)

                                                    aGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGATGTCATCACTCaa                                     >  2:2488523/1‑93 (MQ=255)

                                                    aGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCaa                                     >  1:3298223/1‑93 (MQ=255)

                                                    aGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGCTGCTACTGGAGATTAAATGAGGCCATCCCTCaa                                     >  2:39686/1‑93 (MQ=255)

                                                     gCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAat                                    >  2:2914935/1‑93 (MQ=255)

                                                     gCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAat                                    >  1:1186805/1‑93 (MQ=255)

                                                       tGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAatta                                  <  1:4362501/93‑1 (MQ=255)

                                                          aaTTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTc                               >  1:3057536/1‑93 (MQ=255)

                                                            tttATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCaa                             <  1:2344979/93‑1 (MQ=255)

                                                            tttATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCaa                             <  1:2189499/93‑1 (MQ=255)

                                                             ttattaGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAg                            <  1:707633/93‑1 (MQ=255)

                                                             ttattaGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAg                            <  1:2097722/93‑1 (MQ=255)

                                                              tattaGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAgg                           >  1:2265512/1‑93 (MQ=255)

                                                               attaGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGt                          <  2:1751446/93‑1 (MQ=255)

                                                                 taGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTa                        <  1:3796915/93‑1 (MQ=255)

                                                                  aGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTAt                       >  1:3726441/1‑93 (MQ=255)

                                                                  aGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTAt                       >  1:3918135/1‑93 (MQ=255)

                                                                  aGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTAt                       <  2:3954458/93‑1 (MQ=255)

                                                                   gTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTAtt                      >  1:4491796/1‑93 (MQ=255)

                                                                    tAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTg                     <  2:3743851/93‑1 (MQ=255)

                                                                          gATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGa               >  1:1015046/1‑93 (MQ=255)

                                                                          gATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGa               <  2:3221784/93‑1 (MQ=255)

                                                                          gATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGa               <  2:2287665/93‑1 (MQ=255)

                                                                          gATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGa               >  1:3331877/1‑93 (MQ=255)

                                                                           aTCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGAt              >  1:2363658/1‑93 (MQ=255)

                                                                           aTCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGAt              >  2:1692254/1‑93 (MQ=255)

                                                                           aTCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGAt              <  2:4509057/93‑1 (MQ=255)

                                                                            tCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGAtt             >  1:3176482/1‑93 (MQ=255)

                                                                             ccAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTa            >  1:2856553/1‑93 (MQ=255)

                                                                             ccAGACGCATAACCCCTCCCATAACGGATCAAAGATGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATCCAAGGTTATTGACCAGATTa            >  1:96302/1‑93 (MQ=255)

                                                                              cAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTaa           <  2:1707984/93‑1 (MQ=255)

                                                                              cAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTaa           <  1:63862/93‑1 (MQ=255)

                                                                               aGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAAt          >  1:3065052/1‑93 (MQ=255)

                                                                                gACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAAtg         >  2:2149168/1‑93 (MQ=255)

                                                                                gACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAAtg         >  1:1587292/1‑93 (MQ=255)

                                                                                gACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAAtg         <  2:1447773/93‑1 (MQ=255)

                                                                                 aCGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAAtgt        <  2:2784126/93‑1 (MQ=255)

                                                                                 aCGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAAtgt        <  2:419784/93‑1 (MQ=255)

                                                                                  cGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAAtgtg       <  1:3691/93‑1 (MQ=255)

                                                                                  cGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAAtgtg       <  2:773885/93‑1 (MQ=255)

                                                                                    cATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTgaa     >  1:720282/1‑93 (MQ=255)

                                                                                      tAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTgaaaa   <  2:488155/93‑1 (MQ=255)

                                                                                      tAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTgaaaa   <  1:979654/93‑1 (MQ=255)

                                                                                      tAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTgaaaa   >  2:3753512/1‑93 (MQ=255)

                                                                                      tAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTgaaaa   <  2:3183107/93‑1 (MQ=255)

                                                                                       aaCCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTgaaaag  >  1:3796589/1‑93 (MQ=255)

                                                                                       aaCCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTgaaaag  <  1:180073/93‑1 (MQ=255)

GATAAATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACTCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAG  >  NC_000913/2732107‑2732286

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`