BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,757,775	T→C	L257P (CTC→CCC)	yfjI →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,757,775	0	T	C	97.3%	572.1 / 3.7	183	L257P (CTC→CCC)	yfjI	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (3/2); new base C (97/81); total (100/83)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.24e-01

Only 100 of 190 total aligned reads displayed.

TGTCGCTGATGGTCCAGCCTAATGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCTCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAATTTTTTCAAATGAACATTTGCCGGTATTTCACCAACGTC  >  NC_000913/2757685‑2757864

tGTCGCTGATGGTCCAGCCTAATGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCa                                                                                         <  1:2464298/93‑1 (MQ=255)

tGTCGCTGATGGTCCAGCCTAATGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCa                                                                                         <  1:3651875/93‑1 (MQ=255)

tGTCGCTGATGGTCCAGCCTAATGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGAGCCCCa                                                                                         >  1:3283959/1‑93 (MQ=255)

  tCGCTGATGGTCCAGCCTAATGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCAtg                                                                                       <  1:1059919/93‑1 (MQ=255)

  tCGCTGATGGTCCAGCCTAATGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCAtg                                                                                       >  2:4152053/1‑93 (MQ=255)

   cGCTGATGGTCCAGCCTAATGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCAtgt                                                                                      >  2:3418194/1‑93 (MQ=255)

     cTGATGGTCCAGCCTAATGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGc                                                                                    >  2:2921651/1‑93 (MQ=255)

     cTGATGGTCCAGCCTAATGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGACAAACGAGATTGGATTTTTTGCACGGTGCCTCATGTGc                                                                                    >  1:740689/1‑93 (MQ=255)

      tGATGGTCCAGCCTAATGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGcc                                                                                   <  1:4067906/93‑1 (MQ=255)

       gATGGTCCAGCCTAATGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCa                                                                                  <  2:1448186/93‑1 (MQ=255)

          ggTCCAGCCTAATGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGcc                                                                               <  1:540505/93‑1 (MQ=255)

             ccAGCCTAATGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGc                                                                            >  1:2608522/1‑93 (MQ=255)

              cAGCCTAATGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCt                                                                           >  1:1658748/1‑93 (MQ=255)

              cAGCCTAATGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCt                                                                           <  1:504075/93‑1 (MQ=255)

              cAGCCTAATGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCt                                                                           >  1:1453074/1‑93 (MQ=255)

              cAGCCTAATGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCt                                                                           >  2:1014436/1‑93 (MQ=255)

              cAGCCTAATGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCt                                                                           <  2:915326/93‑1 (MQ=255)

               aGCCTAATGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCtt                                                                          <  1:856048/93‑1 (MQ=255)

                gCCTAATGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGTATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTc                                                                         <  2:3490225/93‑1 (MQ=255)

                gCCTAATGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTc                                                                         <  2:2764824/93‑1 (MQ=255)

                 ccTAATGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCa                                                                        >  2:3339423/1‑93 (MQ=255)

                  cTAATGTTTTTAAGGGTTATATCGACAGGGAAGGAGATATGGCAAAGGCGCTTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCaa                                                                       >  1:2275495/1‑93 (MQ=255)

                  cTAATGTTTTTAAGGGTTATATCGACAGGCAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCaa                                                                       >  2:199975/1‑93 (MQ=255)

                  cTAATGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCTCATGTGCCAGCCTGCTTCaa                                                                       <  2:1589448/93‑1 (MQ=255)

                  cTAATGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCaa                                                                       >  1:439649/1‑93 (MQ=255)

                   tAATGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAac                                                                      >  2:2984048/1‑93 (MQ=255)

                   tAATGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAac                                                                      >  1:1581209/1‑93 (MQ=255)

                    aaTGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAaca                                                                     >  1:2952766/1‑93 (MQ=255)

                    aaTGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAaca                                                                     <  1:1322262/93‑1 (MQ=255)

                     aTGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAacac                                                                    >  2:26429/1‑93 (MQ=255)

                     aTGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAacac                                                                    >  2:1847385/1‑93 (MQ=255)

                     aTGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAacac                                                                    >  2:1262447/1‑93 (MQ=255)

                     aTGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAacac                                                                    >  2:642392/1‑93 (MQ=255)

                      tGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAAcaca                                                                   <  1:2135297/93‑1 (MQ=255)

                      tGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAAcaca                                                                   >  1:4728550/1‑93 (MQ=255)

                      tGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAAcaca                                                                   >  1:201541/1‑93 (MQ=255)

                       gTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACaa                                                                  <  1:3357448/93‑1 (MQ=255)

                       gTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACaa                                                                  <  2:3593800/93‑1 (MQ=255)

                       gTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACaa                                                                  <  2:4505139/93‑1 (MQ=255)

                       gTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACaa                                                                  >  1:1951226/1‑93 (MQ=255)

                       gTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACaa                                                                  >  1:2037282/1‑93 (MQ=255)

                         ttttAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAgg                                                                <  1:3922430/93‑1 (MQ=255)

                         ttttAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAgg                                                                <  1:173478/93‑1 (MQ=255)

                           ttAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTa                                                              <  2:3225603/93‑1 (MQ=255)

                             aaGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAAc                                                            <  2:4719232/93‑1 (MQ=255)

                             aaGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAAc                                                            >  2:2426553/1‑93 (MQ=255)

                                ggTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGa                                                         <  1:3379449/93‑1 (MQ=255)

                                ggTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCATGCTTCAACACAAGGTAACAGa                                                         >  2:4356577/1‑93 (MQ=255)

                                  ttATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGaaa                                                       >  2:3801726/1‑93 (MQ=255)

                                   tataTCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGaaaa                                                      >  1:1802923/1‑93 (MQ=255)

                                    atatCGACAGGAAAGGGGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGaaaaa                                                     >  1:4149713/1‑93 (MQ=255)

                                    atatCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGaaaaa                                                     <  2:154160/93‑1 (MQ=255)

                                    atatCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGaaaaa                                                     <  2:295976/93‑1 (MQ=255)

                                     tatCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAAt                                                    <  1:3065862/93‑1 (MQ=255)

                                     tatCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAAt                                                    <  2:1096628/93‑1 (MQ=255)

                                       tCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAAttt                                                  >  1:2747839/1‑93 (MQ=255)

                                        cGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTc                                                 >  2:920086/1‑93 (MQ=255)

                                         gACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTcc                                                <  2:4579045/93‑1 (MQ=255)

                                         gACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTcc                                                >  2:1936118/1‑93 (MQ=255)

                                           cAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCaa                                              >  2:592989/1‑93 (MQ=255)

                                           cAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCaa                                              <  1:3637031/93‑1 (MQ=255)

                                             ggAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAAcc                                            >  2:1465284/1‑93 (MQ=255)

                                             ggAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAAcc                                            >  1:1120811/1‑93 (MQ=255)

                                                aaGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCaa                                         >  2:4249738/1‑93 (MQ=255)

                                                aaGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCaa                                         <  2:2585595/93‑1 (MQ=255)

                                                 aGGAGATATGGCAAAGGGGATTTGATTTTTTGCACTGTGCCTCATGTTCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAAt                                        <  1:1484851/93‑1 (MQ=255)

                                                 aGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAAt                                        >  1:4036108/1‑93 (MQ=255)

                                                 aGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAAt                                        >  1:4172554/1‑93 (MQ=255)

                                                 aGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAAt                                        >  2:749463/1‑93 (MQ=255)

                                                 aGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAAt                                        >  1:1284155/1‑93 (MQ=255)

                                                  ggAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAAtt                                       >  1:1543462/1‑93 (MQ=255)

                                                  ggAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAAtt                                       <  1:4230466/93‑1 (MQ=255)

                                                  ggAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAAtt                                       >  1:3994425/1‑93 (MQ=255)

                                                  ggAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAAtt                                       >  2:1683575/1‑93 (MQ=255)

                                                   gagaTATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAAttt                                      <  1:743883/93‑1 (MQ=255)

                                                      atatGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACACAAtttttt                                   >  1:728714/1‑93 (MQ=255)

                                                       tatGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAATTTTTTc                                  <  1:3631260/93‑1 (MQ=255)

                                                       tatGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAATTTTTTc                                  <  1:706167/93‑1 (MQ=255)

                                                       aatGGCAAAGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAATTTTTTc                                  <  1:3631261/92‑1 (MQ=255)

                                                             aaaGGGGATTGGATTTTTTGCACGGGGCCCCATGTGCCAGTCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAATTTTTTCAAATGa                            >  2:3076053/1‑93 (MQ=255)

                                                               aGGGGATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAATTTTTTCAAATGAAc                          <  2:345609/93‑1 (MQ=255)

                                                                ggggATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAATTTTTTCAAATGAACa                         >  2:2557003/1‑93 (MQ=255)

                                                                ggggATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAATTTTTTCAAATGAACa                         >  1:3127739/1‑93 (MQ=255)

                                                                ggggATTGGATTTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAATTTTTTCAAATGAACa                         >  2:1802075/1‑93 (MQ=255)

                                                                  ggattggattTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAATTTTTTCAAATGAACAtt                       <  1:3886605/93‑1 (MQ=255)

                                                                   gattggattTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAATTTTTTCAAATGAACAttt                      >  2:1596638/1‑93 (MQ=255)

                                                                   gattggattTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAATTTTTTCAAATGAACAttt                      >  1:3054500/1‑93 (MQ=255)

                                                                   gattggattTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAATTTTTTCAAATGAACAttt                      <  2:3914627/93‑1 (MQ=255)

                                                                    attggattTTTTGCACGGTGCCTCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAACATTTGCAACCCAATTTTTTCAAATGAACATTTg                     >  1:4591423/1‑93 (MQ=255)

                                                                      tggattTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAATTTTTTCAAATGAACATTTGcc                   >  2:3290065/1‑93 (MQ=255)

                                                                        gattTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAATTTTTTCAAATGAACATTTGCCgg                 >  1:2909154/1‑93 (MQ=255)

                                                                        gattTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAATTTTTTCAAATGAACATTTGCCgg                 >  1:1156561/1‑93 (MQ=255)

                                                                         attTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAATTTTTTCAAATGAACATTTGCCGGt                >  2:2242707/1‑93 (MQ=255)

                                                                         attTTTTGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAATTTTTTCAAATGAACATTTGCCGGt                >  2:160619/1‑93 (MQ=255)

                                                                              ttGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAATTTTTTCAAATGAACATTTGCCGGTATTTc           <  1:4337033/93‑1 (MQ=255)

                                                                              ttGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAATTTTTTCAAATGAACATTTGCCGGTATTTc           <  2:1166406/93‑1 (MQ=255)

                                                                               tGCACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAATTTTTTCAAATGAACATTTGCCGGTATTTCa          >  2:2088525/1‑93 (MQ=255)

                                                                                 cACGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAATTTTTTCAAATGAACATTTGCCGGTATTTCAcc        >  1:1412485/1‑93 (MQ=255)

                                                                                   cGGTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAATTTTTTCAAATGAACATTTGCCGGTATTTCACCaa      <  2:2331948/93‑1 (MQ=255)

                                                                                    ggTGCCCCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAATTTTTTCAAATGAACATTTGCCGGTATTTCACCAAc     <  1:2479373/93‑1 (MQ=255)

TGTCGCTGATGGTCCAGCCTAATGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCTCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAATTTTTTCAAATGAACATTTGCCGGTATTTCACCAACGTC  >  NC_000913/2757685‑2757864

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`