BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,798,359	A→G	T65A (ACT→GCT)	b2672 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,798,359	0	A	G	98.9%	572.1 / ‑3.8	184	T65A (ACT→GCT)	b2672	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/2); new base G (83/99); total (83/101)
Fisher's exact test for biased strand distribution p-value = 5.02e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.24e-01

Only 100 of 193 total aligned reads displayed.

TGGGGCAGCGACGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTACTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTACAGCAGCT  >  NC_000913/2798269‑2798448

tGGGGCAGCGGAGACAAAGGGAAAGCTGAAGCCGCACGCAGTAAAGCCCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCt                                                                                         <  2:3792641/93‑1 (MQ=255)

 ggggCAGCGACGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTc                                                                                        >  1:3451701/1‑93 (MQ=255)

  gggCAGCGACGCCAAAGGGGAAGCTGAAGCCGGACGCAGTAAAGCTCCGGCATTGCTGCAAGAAACCAGGGCGCGAATGAATGGTCGTGCTcg                                                                                       >  1:2312432/1‑93 (MQ=255)

      aGCGACGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTc                                                                                   <  2:3895028/93‑1 (MQ=255)

      aGCGACGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTc                                                                                   >  2:11002/1‑93 (MQ=255)

      aGCGACGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTc                                                                                   >  2:1839930/1‑93 (MQ=255)

       gCGACGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTcc                                                                                  >  1:4350377/1‑93 (MQ=255)

       gCGACGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTcc                                                                                  >  2:1231728/1‑93 (MQ=255)

       gCGACGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTACTCGCGTcc                                                                                  <  1:4629465/93‑1 (MQ=255)

          aCGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTCCTCGCGTCCAGc                                                                               >  1:3396620/1‑93 (MQ=255)

          aCGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGCGCTCGCGTCCAGc                                                                               <  2:1320909/93‑1 (MQ=255)

           cGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCa                                                                              <  2:35490/93‑1 (MQ=255)

             ccAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAg                                                                            >  1:1383073/1‑93 (MQ=255)

              cAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGc                                                                           <  2:3265507/93‑1 (MQ=255)

               aaaGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGcc                                                                          >  1:4067179/1‑93 (MQ=255)

               aaaGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGcc                                                                          >  1:2567038/1‑93 (MQ=255)

                aaGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCcg                                                                         >  2:145181/1‑93 (MQ=255)

                aaGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCcg                                                                         >  1:3673919/1‑93 (MQ=255)

                aaGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCcg                                                                         >  1:1189850/1‑93 (MQ=255)

                aaGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCcg                                                                         >  1:208408/1‑93 (MQ=255)

                    ggAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCcgcgcg                                                                     <  1:1864070/93‑1 (MQ=255)

                       aGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGa                                                                  <  2:108180/93‑1 (MQ=255)

                       aGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGa                                                                  <  2:858503/93‑1 (MQ=255)

                        gCTGAAGCCGCACGCAGTAAAGCTCAGACATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGAt                                                                 <  2:2904994/93‑1 (MQ=255)

                         cTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATg                                                                <  1:3752727/93‑1 (MQ=255)

                           gAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGcc                                                              <  1:3474611/93‑1 (MQ=255)

                             aGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGt                                                            <  2:903309/93‑1 (MQ=255)

                             aGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGt                                                            <  1:4400387/93‑1 (MQ=255)

                             aGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGt                                                            <  1:2678292/93‑1 (MQ=255)

                              gCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGtt                                                           >  2:3121433/1‑93 (MQ=255)

                              gCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGtt                                                           <  2:1705261/93‑1 (MQ=255)

                              gCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGtt                                                           <  2:1782691/93‑1 (MQ=255)

                              gCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGtt                                                           <  1:1258775/93‑1 (MQ=255)

                              gCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGtt                                                           <  1:3841170/93‑1 (MQ=255)

                               ccGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTg                                                          <  2:368922/93‑1 (MQ=255)

                               ccGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTg                                                          <  1:1545347/93‑1 (MQ=255)

                                cgcacgcaGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTgg                                                         >  1:899631/1‑93 (MQ=255)

                                 gcacgcaGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGc                                                        <  2:3308863/93‑1 (MQ=255)

                                 gcacgcaGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGc                                                        <  1:4160099/93‑1 (MQ=255)

                                 gcacgcaGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGc                                                        >  2:3101315/1‑93 (MQ=255)

                                 gcacgcaGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGc                                                        <  2:1677119/93‑1 (MQ=255)

                                  cacgcaGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCt                                                       <  2:630763/93‑1 (MQ=255)

                                    cgcaGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTgc                                                     <  2:2045794/93‑1 (MQ=255)

                                    cgcaGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTgc                                                     <  1:568586/93‑1 (MQ=255)

                                    cgcaGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTgc                                                     >  2:264853/1‑93 (MQ=255)

                                     gcaGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTgcg                                                    >  2:231639/1‑93 (MQ=255)

                                      caGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTgcgc                                                   <  1:2170274/93‑1 (MQ=255)

                                      caGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTgcgc                                                   <  2:2614692/93‑1 (MQ=255)

                                        gTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCgg                                                 <  1:3585394/93‑1 (MQ=255)

                                            aGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTc                                             <  1:3213008/93‑1 (MQ=255)

                                            aGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTc                                             >  1:2385426/1‑93 (MQ=255)

                                               tCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCttt                                          <  1:2406492/93‑1 (MQ=255)

                                               tCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCttt                                          >  1:2450342/1‑93 (MQ=255)

                                               tCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCttt                                          >  2:2805074/1‑93 (MQ=255)

                                                cAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCtttt                                         <  1:3398597/93‑1 (MQ=255)

                                                cAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCtttt                                         <  1:4610362/93‑1 (MQ=255)

                                                 aGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTg                                        <  1:172825/93‑1 (MQ=255)

                                                  ggCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGt                                       <  1:2155748/93‑1 (MQ=255)

                                                  ggCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGt                                       >  1:4702538/1‑93 (MQ=255)

                                                  ggCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGt                                       >  2:2451664/1‑93 (MQ=255)

                                                     aTTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCg                                    >  1:3173100/1‑93 (MQ=255)

                                                      ttGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGt                                   <  2:4446106/93‑1 (MQ=255)

                                                      ttGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGt                                   >  2:2217558/1‑93 (MQ=255)

                                                          tGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGaaa                               <  1:3169726/93‑1 (MQ=255)

                                                          tGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGaaa                               <  2:2183974/93‑1 (MQ=255)

                                                           gaaagaaaCCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAg                              >  2:4420032/1‑93 (MQ=255)

                                                            aaagaaaCCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGa                             <  2:3195351/93‑1 (MQ=255)

                                                             aagaaaCCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGAc                            <  2:577457/93‑1 (MQ=255)

                                                              agaaaCCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGCTTCTTTTGTTCGTGAAAGAcc                           >  1:1531627/1‑93 (MQ=255)

                                                              agaaaCCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGAcc                           >  2:4720794/1‑93 (MQ=255)

                                                              agaaaCCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGAcc                           <  1:4733560/93‑1 (MQ=255)

                                                               gaaaCCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGAccc                          <  1:1669086/93‑1 (MQ=255)

                                                               gaaaCCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGAccc                          >  2:488554/1‑93 (MQ=255)

                                                                aaaCCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCt                         <  2:1576100/93‑1 (MQ=255)

                                                                 aaCCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTg                        >  2:2731455/1‑93 (MQ=255)

                                                                  aCCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTgg                       <  1:991307/93‑1 (MQ=255)

                                                                  aCCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTgg                       >  2:1707878/1‑93 (MQ=255)

                                                                   ccAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGgt                      >  2:2272267/1‑93 (MQ=255)

                                                                   ccAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGgt                      <  2:2534885/93‑1 (MQ=255)

                                                                    cAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGgtg                     <  2:2929557/93‑1 (MQ=255)

                                                                    cAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGgtg                     <  1:1989524/93‑1 (MQ=255)

                                                                      gggCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTa                   >  1:105072/1‑93 (MQ=255)

                                                                          gcgAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGt               <  1:1926380/93‑1 (MQ=255)

                                                                          gcgAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGt               <  1:2797781/93‑1 (MQ=255)

                                                                          gcgAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGt               <  2:481575/93‑1 (MQ=255)

                                                                          gcgAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGt               <  2:2796161/93‑1 (MQ=255)

                                                                            gAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTgg             >  2:376086/1‑93 (MQ=255)

                                                                             aaTGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTggg            >  1:2823396/1‑93 (MQ=255)

                                                                             aaTGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTggg            <  1:3010130/93‑1 (MQ=255)

                                                                                 cATGTTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTAca        <  2:3534136/93‑1 (MQ=255)

                                                                                 cATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTAca        <  2:4016938/93‑1 (MQ=255)

                                                                                  aTGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTAcag       >  1:3898697/1‑93 (MQ=255)

                                                                                   tGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGCTTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGCGGGTAccgc      >  2:1735862/1‑93 (MQ=255)

                                                                                   tGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTAcggc      <  2:792181/93‑1 (MQ=255)

                                                                                   tGGTCGTACTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTAcagc      <  1:4018003/93‑1 (MQ=255)

                                                                                    tgTCGTGTTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTAcagca     <  2:3446084/92‑1 (MQ=255)

                                                                                    ggTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTAcagca     <  1:4654924/93‑1 (MQ=255)

                                                                                    ggTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTAcagca     <  1:1159110/93‑1 (MQ=255)

                                                                                       cGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTACAGCAGCt  <  1:1777673/93‑1 (MQ=255)

                                                                                       cGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTACACCAGCt  >  2:4565444/1‑93 (MQ=255)

TGGGGCAGCGACGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTACTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTACAGCAGCT  >  NC_000913/2798269‑2798448

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`