Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,902,688 A→G intergenic (+1292/+81) ygcE → / ← ygcF putative kinase/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,902,6880AG99.0% 328.6 / ‑5.2 103intergenic (+1292/+81)ygcE/ygcFputative kinase/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base G (77/25);  total (78/25)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 106 total aligned reads displayed.

ACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGAGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGCAATA  >  NC_000913/2902599‑2902778
                                                                                         |                                                                                          
aCCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGtt                                                                                         >  2:373335/1‑93 (MQ=255)
 ccGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGttt                                                                                        <  2:3613451/93‑1 (MQ=255)
 ccGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGttt                                                                                        >  2:4558002/1‑93 (MQ=255)
   gCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTc                                                                                      >  1:2182427/1‑93 (MQ=255)
   gCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGGTTTc                                                                                      >  2:1289941/1‑93 (MQ=255)
    cAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCa                                                                                     <  1:3576765/93‑1 (MQ=255)
     aataatTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCag                                                                                    >  2:2712396/1‑93 (MQ=255)
     aataatTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCag                                                                                    >  1:601131/1‑93 (MQ=255)
      ataatTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATTGGTAAAATGGAGGGGTTTTCaga                                                                                   >  2:2627275/1‑93 (MQ=255)
      ataatTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCaga                                                                                   >  2:67579/1‑93 (MQ=255)
        aatTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAgg                                                                                 >  1:3502998/1‑93 (MQ=255)
          ttttCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGca                                                                               >  1:4644594/1‑92 (MQ=255)
          ttttCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCg                                                                               >  1:1228000/1‑93 (MQ=255)
          ttttCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCg                                                                               >  1:4428496/1‑93 (MQ=255)
           tttCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGa                                                                              <  2:485022/93‑1 (MQ=255)
           tttCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGa                                                                              <  2:3773346/93‑1 (MQ=255)
               aCTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGacaaa                                                                          >  2:3471928/1‑93 (MQ=255)
               aCTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGacaaa                                                                          >  2:717299/1‑93 (MQ=255)
               aCTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGacaaa                                                                          >  2:1021758/1‑93 (MQ=255)
               aCTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGATGGGTAAAATGGAGGGGTTTTCAGAGGCGacaaaa                                                                         >  2:1359356/1‑92 (MQ=255)
                 tCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGacaaaca                                                                        >  1:3768611/1‑93 (MQ=255)
                 tCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGacaaaca                                                                        >  2:2223408/1‑93 (MQ=255)
                 tCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGacaaaca                                                                        >  1:2172022/1‑93 (MQ=255)
                  ccAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAACATGGAGGGGATTTCAGAGGCGacaaacaa                                                                       >  2:3970664/1‑93 (MQ=255)
                  ccAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGacaaacaa                                                                       >  2:3970665/1‑93 (MQ=255)
                  ccAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGacaaacaa                                                                       >  2:4533591/1‑93 (MQ=255)
                  ccAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGacaaacaa                                                                       >  2:2908253/1‑93 (MQ=255)
                    aGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAata                                                                     >  2:1869410/1‑93 (MQ=255)
                      cGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAAtata                                                                   <  2:4607683/93‑1 (MQ=255)
                      cGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAAtata                                                                   >  2:2131986/1‑93 (MQ=255)
                       gAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATaa                                                                  >  1:2237653/1‑93 (MQ=255)
                       gAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATaa                                                                  >  2:182546/1‑93 (MQ=255)
                        aaaaaTTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATaaa                                                                 <  1:4128851/93‑1 (MQ=255)
                         aaaaTTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAAt                                                                <  1:2777565/93‑1 (MQ=255)
                          aaaTTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATg                                                               <  1:4309360/93‑1 (MQ=255)
                           aaTTAATGCCACAGAATTTGTAGAGAATGCTAATGCTTAGCCCTGAATGGGTTAAATGGAGGGGATTTCAGAGGCGACAAACACTCTCAATGa                                                              >  2:4711583/1‑93 (MQ=255)
                           aaTTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGCTGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGa                                                              >  1:896128/1‑93 (MQ=255)
                            aTTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAg                                                             >  1:778990/1‑93 (MQ=255)
                            aTTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAg                                                             <  2:626328/93‑1 (MQ=255)
                             ttAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAga                                                            >  1:3912419/1‑92 (MQ=255)
                             ttAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGt                                                            >  1:3252096/1‑93 (MQ=255)
                               aaTGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAg                                                          >  2:3336128/1‑93 (MQ=255)
                                aTGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGa                                                         >  2:1304145/1‑93 (MQ=255)
                                   ccACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGt                                                      >  2:1185454/1‑93 (MQ=255)
                                   ccACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGt                                                      <  2:1274850/93‑1 (MQ=255)
                                   ccACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGt                                                      >  2:2979064/1‑93 (MQ=255)
                                    cacaGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTc                                                     >  2:2483139/1‑93 (MQ=255)
                                     acaGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCt                                                    >  2:3433714/1‑93 (MQ=255)
                                       aGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCttt                                                  <  2:4437899/93‑1 (MQ=255)
                                        gAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTa                                                 >  2:831898/1‑93 (MQ=255)
                                         aaTTTGTAGAGAATGCTAATGATTAGCCCTGGATGTGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTAc                                                >  1:841973/1‑93 (MQ=255)
                                          aTTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACa                                               >  1:4108073/1‑93 (MQ=255)
                                              gTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGtt                                           >  2:295571/1‑93 (MQ=255)
                                               tAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTc                                          >  2:178687/1‑93 (MQ=255)
                                                 gagaATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCa                                        >  2:2562099/1‑93 (MQ=255)
                                                 gagaATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCa                                        >  1:4509491/1‑93 (MQ=255)
                                                 gagaATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGGCTTTACAGGTTCCa                                        >  2:1787311/1‑93 (MQ=255)
                                                   gaATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTGAGAGGCGACAAACAATACAAGTGAGTAGAAGTCTTTACAGGGTacaca                                      >  1:180052/1‑92 (MQ=255)
                                                   gaATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCAcc                                      >  1:180051/1‑93 (MQ=255)
                                                   gaATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCAcc                                      <  1:512780/93‑1 (MQ=255)
                                                   gaATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGCTCCAcc                                      >  1:1890594/1‑93 (MQ=255)
                                                    aaTGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCAccc                                     >  1:380232/1‑93 (MQ=255)
                                                     aTGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCa                                    <  2:3713278/93‑1 (MQ=255)
                                                      tGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCAt                                   >  1:3691040/1‑93 (MQ=255)
                                                      tGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCAt                                   <  1:756030/93‑1 (MQ=255)
                                                        cTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCAttt                                 >  2:681290/1‑93 (MQ=255)
                                                        cTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCAttt                                 >  2:3013086/1‑93 (MQ=255)
                                                         tAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTta                                >  2:804047/1‑93 (MQ=255)
                                                         tAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTta                                >  1:2502330/1‑93 (MQ=255)
                                                         tAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTta                                >  2:1541252/1‑93 (MQ=255)
                                                           aTGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTtata                              >  2:3930776/1‑93 (MQ=255)
                                                             gATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAAc                            <  2:4032005/93‑1 (MQ=255)
                                                               ttAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGc                          >  1:176716/1‑93 (MQ=255)
                                                               ttAGCCCTGGATGGGTAAAATGGAGGGGATTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGATCCACCCATTTATAACGc                          >  2:3506431/1‑93 (MQ=255)
                                                                tAGCCCTGGATGGGTAAAATGGAGGAGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCt                         >  2:3994511/1‑93 (MQ=255)
                                                                  gCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTta                       >  2:4658800/1‑93 (MQ=255)
                                                                  gCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTta                       >  1:1591003/1‑93 (MQ=255)
                                                                    ccTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTtata                     >  1:4301322/1‑93 (MQ=255)
                                                                    ccTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTtata                     >  2:4530854/1‑93 (MQ=255)
                                                                     cTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATaa                    >  1:3535062/1‑93 (MQ=255)
                                                                     cTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATaa                    >  1:2183878/1‑93 (MQ=255)
                                                                       ggATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAAt                  >  2:2044334/1‑93 (MQ=255)
                                                                       ggATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAAt                  >  1:406921/1‑93 (MQ=255)
                                                                       ggATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAAt                  >  2:3382291/1‑93 (MQ=255)
                                                                        gATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATg                 >  2:1831024/1‑93 (MQ=255)
                                                                        gATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATg                 >  1:194219/1‑93 (MQ=255)
                                                                        gATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATg                 >  2:4057953/1‑93 (MQ=255)
                                                                         aTGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGt                >  2:2049460/1‑93 (MQ=255)
                                                                           gggTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGttt              <  2:722549/93‑1 (MQ=255)
                                                                            ggTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTa             <  2:3371768/93‑1 (MQ=255)
                                                                            ggTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTa             <  2:1358278/93‑1 (MQ=255)
                                                                            ggTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTa             <  2:1358279/93‑1 (MQ=255)
                                                                               aaaaTGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATc          >  2:3970395/1‑93 (MQ=255)
                                                                                aaaTGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCa         <  1:2208203/93‑1 (MQ=255)
                                                                                aaaTGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCa         <  1:2643901/93‑1 (MQ=255)
                                                                                aaaTGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCa         <  1:4443300/93‑1 (MQ=255)
                                                                                aaaTGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCa         <  1:1655539/93‑1 (MQ=255)
                                                                                   tGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGc      <  2:1079576/93‑1 (MQ=255)
                                                                                   tGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGc      >  1:2648170/1‑93 (MQ=255)
                                                                                       ggagTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGCAata  <  2:4530877/93‑1 (MQ=255)
                                                                                         |                                                                                          
ACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGAGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGCAATA  >  NC_000913/2902599‑2902778

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: