BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,940,324	G→A	A89V (GCC→GTC)	gcvA ←	GcvA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,940,324	0	G	A	99.5%	661.1 / NA	195	A89V (GCC→GTC)	gcvA	GcvA
Reads supporting (aligned to +/- strand): ref base G (0/1); major base A (79/114); minor base C (1/0); total (80/115)
Fisher's exact test for biased strand distribution p-value = 4.12e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 199 total aligned reads displayed.

GCTGAATTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGGCCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAGCAGGAGTGAA  >  NC_000913/2940234‑2940416

  tGAATTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTg                                                                                          >  1:3957338/1‑93 (MQ=255)

   gAATTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTgg                                                                                         <  1:71925/93‑1 (MQ=255)

    aaTTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGa                                                                                        <  2:2680579/93‑1 (MQ=255)

     aTTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAg                                                                                       >  2:1072380/1‑93 (MQ=255)

     aTTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAg                                                                                       <  1:525895/93‑1 (MQ=255)

       tAAAGCGGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGtt                                                                                     <  1:4327499/93‑1 (MQ=255)

        aaaGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGttt                                                                                    <  2:334446/93‑1 (MQ=255)

         aaGCTGGAAAGTCGCGGAACCAACCACTGAATGGCGAAACTGGGGAGTAAACTGACCGTCCACGCCCCCTTGGCGCTACGGACCTGGAGTTTa                                                                                   >  1:336038/1‑93 (MQ=255)

         aaGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGGCCTGGAGTTTa                                                                                   <  2:1583143/93‑1 (MQ=255)

         aaGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTa                                                                                   >  2:3959441/1‑93 (MQ=255)

          aGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGCGTTTAc                                                                                  >  2:275258/1‑93 (MQ=255)

           gCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTAcg                                                                                 >  2:503491/1‑93 (MQ=255)

           gCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTAcg                                                                                 <  1:3495585/93‑1 (MQ=255)

             tGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTAcgcg                                                                               <  1:4496455/93‑1 (MQ=255)

              ggAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGt                                                                              >  1:1712371/1‑93 (MQ=255)

              ggAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGt                                                                              <  2:3709936/93‑1 (MQ=255)

               gAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTc                                                                             >  1:491718/1‑93 (MQ=255)

               gAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTc                                                                             >  2:3553873/1‑93 (MQ=255)

                 aaGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGc                                                                           <  2:1838901/93‑1 (MQ=255)

                 aaGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGc                                                                           <  1:2442598/93‑1 (MQ=255)

                  aGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCt                                                                          >  1:4692372/1‑93 (MQ=255)

                    tCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTc                                                                        <  2:1996078/93‑1 (MQ=255)

                      gcgGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCgg                                                                      <  1:3469364/93‑1 (MQ=255)

                      gcgGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCgg                                                                      <  1:3327556/93‑1 (MQ=255)

                        ggAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGtt                                                                    >  1:4109335/1‑93 (MQ=255)

                        ggAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGtt                                                                    <  1:2038426/93‑1 (MQ=255)

                        ggAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGtt                                                                    <  2:4256008/93‑1 (MQ=255)

                             caaccaaTGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCAGTTAATTg                                                               >  1:1700390/1‑93 (MQ=255)

                              aaccaaTGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGc                                                              >  2:4117978/1‑93 (MQ=255)

                              aaccaaTGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGc                                                              >  1:4562739/1‑93 (MQ=255)

                                ccaaTGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGa                                                            <  2:2667301/93‑1 (MQ=255)

                                ccaaTGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGa                                                            >  2:3047989/1‑93 (MQ=255)

                                 caaTGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGaa                                                           >  2:3482318/1‑93 (MQ=255)

                                 caaTGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGaa                                                           >  1:97255/1‑93 (MQ=255)

                                  aatgaatgGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGaaa                                                          >  1:4091619/1‑93 (MQ=255)

                                   atgaatgGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGaaaa                                                         >  2:496481/1‑93 (MQ=255)

                                     gaatgGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAata                                                       >  1:904754/1‑93 (MQ=255)

                                     gaatgGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAata                                                       <  2:3140465/93‑1 (MQ=255)

                                     gaatgGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAata                                                       <  1:2477492/93‑1 (MQ=255)

                                     gaaggGCGAAGCTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAata                                                       <  2:1315170/93‑1 (MQ=255)

                                       atgGCGAAACTGGGGAGTAAACTGACCGTCAACGCCACCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATAtc                                                     <  1:1792809/93‑1 (MQ=255)

                                        tgGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATAtct                                                    <  2:1095449/93‑1 (MQ=255)

                                         ggCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATAtctc                                                   <  2:1970401/93‑1 (MQ=255)

                                         ggCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATAtctc                                                   <  1:3609267/93‑1 (MQ=255)

                                          gCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAACATATctct                                                  >  1:1073056/1‑93 (MQ=255)

                                           cGAAACTGGTGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCtt                                                 <  1:494835/93‑1 (MQ=255)

                                           cGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCtt                                                 <  2:2012958/93‑1 (MQ=255)

                                           cGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCtt                                                 <  2:3862063/93‑1 (MQ=255)

                                            gAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCttt                                                <  1:2823821/93‑1 (MQ=255)

                                            gAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCttt                                                <  1:1073121/93‑1 (MQ=255)

                                             aaaCTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTg                                               <  2:3747975/93‑1 (MQ=255)

                                             aaaCTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTg                                               <  1:83806/93‑1 (MQ=255)

                                              aaCTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGa                                              >  1:2454776/1‑93 (MQ=255)

                                                cTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGata                                            >  1:1619380/1‑93 (MQ=255)

                                                cTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGata                                            <  2:3844078/93‑1 (MQ=255)

                                                cTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGata                                            <  1:289399/93‑1 (MQ=255)

                                                cTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGata                                            <  1:2926489/93‑1 (MQ=255)

                                                cTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGata                                            <  2:2134791/93‑1 (MQ=255)

                                                cTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGata                                            <  2:21060/93‑1 (MQ=255)

                                                  ggggAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATc                                          <  2:4625532/93‑1 (MQ=255)

                                                   gggAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCg                                         <  1:1950499/93‑1 (MQ=255)

                                                    ggAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGa                                        <  1:1561744/93‑1 (MQ=255)

                                                    ggAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGa                                        <  2:1462407/93‑1 (MQ=255)

                                                     gAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAg                                       >  1:2807634/1‑93 (MQ=255)

                                                      aGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAgg                                      <  1:4655720/93‑1 (MQ=255)

                                                       gTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATAGAGGa                                     >  2:4532619/1‑93 (MQ=255)

                                                        gaaaCTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGaa                                    <  1:1300545/92‑1 (MQ=255)

                                                         aaaCTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGaaa                                   <  2:3675968/93‑1 (MQ=255)

                                                         aaaCTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGaaa                                   <  2:2527127/93‑1 (MQ=255)

                                                          aaCTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAAt                                  >  2:785440/1‑93 (MQ=255)

                                                          aaCTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAAt                                  <  1:30758/93‑1 (MQ=255)

                                                          aaCTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAAt                                  <  1:4188423/93‑1 (MQ=255)

                                                           aCTGACCGTCAACGCCCCCTTGGTGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATa                                 <  2:3387346/93‑1 (MQ=255)

                                                           aCTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATa                                 <  1:4295538/93‑1 (MQ=255)

                                                           aCTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATa                                 >  2:186959/1‑93 (MQ=255)

                                                            cTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAg                                <  2:4503962/93‑1 (MQ=255)

                                                            cTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAg                                <  1:4396937/93‑1 (MQ=255)

                                                               aCCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCtt                             <  2:3651414/93‑1 (MQ=255)

                                                               aCCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCtt                             <  2:1867051/93‑1 (MQ=255)

                                                                ccGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCttt                            <  2:1395123/93‑1 (MQ=255)

                                                                ccGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCttt                            <  2:2994414/93‑1 (MQ=255)

                                                                 cGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTg                           <  2:3293619/93‑1 (MQ=255)

                                                                     aaCGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCt                       <  2:239872/93‑1 (MQ=255)

                                                                     aaCGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCt                       <  2:2215707/93‑1 (MQ=255)

                                                                         cccccTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCt                   <  1:4229902/93‑1 (MQ=255)

                                                                           cccTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATCGCTTTGCACGTCCTCg                 >  2:3602329/1‑93 (MQ=255)

                                                                           cccTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCg                 >  1:3284183/1‑93 (MQ=255)

                                                                           cccTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCg                 >  1:3660374/1‑93 (MQ=255)

                                                                           cccTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCg                 <  1:3436273/93‑1 (MQ=255)

                                                                           cccTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCg                 >  1:193976/1‑93 (MQ=255)

                                                                             cTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGt               >  1:3546786/1‑93 (MQ=255)

                                                                              ttGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTc              >  1:2521432/1‑93 (MQ=255)

                                                                                ggCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTcag            >  2:3462763/1‑93 (MQ=255)

                                                                                 gcgcTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTcagc           >  1:3269958/1‑93 (MQ=255)

                                                                                  cgcTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTcagca          <  1:2351789/93‑1 (MQ=255)

                                                                                   gcTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTcagcag         <  1:2102145/93‑1 (MQ=255)

                                                                                     tACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAGCAGGa       >  2:1435382/1‑93 (MQ=255)

                                                                                     tACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAGCAGGa       >  2:3785375/1‑93 (MQ=255)

                                                                                     tACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAGCAGGa       >  1:624978/1‑93 (MQ=255)

                                                                                          gCCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAGCAGGAGTGaa  <  1:2994174/93‑1 (MQ=255)

GCTGAATTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGGCCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAGCAGGAGTGAA  >  NC_000913/2940234‑2940416

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`