Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,947,112 T→C intergenic (‑80/‑152) b2817 ← / → argA putative amidase/N‑acetylglutamate synthase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,947,1120TC99.7% 1011.2 / ‑5.0 307intergenic (‑80/‑152)b2817/argAputative amidase/N‑acetylglutamate synthase
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (190/116);  total (190/117)
Fisher's exact test for biased strand distribution p-value = 3.81e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.98e-01

Only 100 of 313 total aligned reads displayed.

GATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGC  >  NC_000913/2947022‑2947201
                                                                                          |                                                                                         
 aTCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAAt                                                                                        >  1:2712908/1‑93 (MQ=255)
  tCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATc                                                                                       >  1:248808/1‑93 (MQ=255)
      gACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTc                                                                                   <  2:705873/93‑1 (MQ=255)
      gACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTc                                                                                   <  1:3597521/93‑1 (MQ=255)
      gACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTc                                                                                   <  1:342244/93‑1 (MQ=255)
      gACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTc                                                                                   <  2:2771222/93‑1 (MQ=255)
       aCATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCa                                                                                  >  2:3356530/1‑93 (MQ=255)
         aTGCCTGTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATc                                                                                >  2:1889093/1‑93 (MQ=255)
         aTGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATc                                                                                <  1:1140662/93‑1 (MQ=255)
          tGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCt                                                                               >  1:4061566/1‑93 (MQ=255)
           gCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCta                                                                              >  1:387311/1‑93 (MQ=255)
            ccTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCtaa                                                                             >  2:2183758/1‑93 (MQ=255)
             ctctCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCtaat                                                                            <  1:4492014/93‑1 (MQ=255)
             ctctCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCtaat                                                                            <  1:4678801/93‑1 (MQ=255)
              tctcCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCtaata                                                                           <  2:210690/93‑1 (MQ=255)
                tcCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATaaa                                                                         >  2:1804241/1‑93 (MQ=255)
                tcCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATaaa                                                                         >  1:2007106/1‑93 (MQ=255)
                 cccGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAAc                                                                        >  2:3523178/1‑93 (MQ=255)
                  ccGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACg                                                                       <  2:119099/93‑1 (MQ=255)
                   cGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACgg                                                                      >  2:1684662/1‑93 (MQ=255)
                   cGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACgg                                                                      >  2:3218579/1‑93 (MQ=255)
                   cGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACgg                                                                      >  2:2064655/1‑93 (MQ=255)
                    gAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGt                                                                     >  1:2802867/1‑93 (MQ=255)
                     aGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTa                                                                    <  1:2908654/93‑1 (MQ=255)
                      gCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTaa                                                                   >  1:1804467/1‑93 (MQ=255)
                      gCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTaa                                                                   <  1:4300466/93‑1 (MQ=255)
                       cAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTaaa                                                                  <  2:4469820/93‑1 (MQ=255)
                        aaaaGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAAc                                                                 >  2:2814435/1‑93 (MQ=255)
                        aaaaGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAAc                                                                 >  2:1292576/1‑93 (MQ=255)
                        aaaaGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAAc                                                                 <  1:829046/93‑1 (MQ=255)
                        aaaaGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAAc                                                                 >  1:1180981/1‑93 (MQ=255)
                        aaaaGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAAc                                                                 >  2:3014333/1‑93 (MQ=255)
                         aaaGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACa                                                                >  2:2143215/1‑93 (MQ=255)
                         aaaGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACa                                                                >  2:1018850/1‑93 (MQ=255)
                         aaaGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACa                                                                >  1:2411137/1‑93 (MQ=255)
                           aGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACAtt                                                              >  1:3295627/1‑93 (MQ=255)
                           aGAAATCTAAGCTGTGTAACAAGTAAACGACTAATGTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACAtt                                                              <  2:650993/93‑1 (MQ=255)
                            gAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTc                                                             <  1:3475619/93‑1 (MQ=255)
                              aaTCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCtt                                                           >  1:1397208/1‑93 (MQ=255)
                              aaTCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCtt                                                           >  1:2064853/1‑93 (MQ=255)
                               aTCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCttt                                                          >  2:813186/1‑93 (MQ=255)
                               aTCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCttt                                                          <  2:90735/93‑1 (MQ=255)
                                tCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCtttt                                                         <  2:3572121/93‑1 (MQ=255)
                                  tAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTta                                                       >  1:3015345/1‑93 (MQ=255)
                                   aaGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTtat                                                      >  2:1211500/1‑93 (MQ=255)
                                    aGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTtata                                                     >  2:2018418/1‑93 (MQ=255)
                                    aGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTtata                                                     >  2:2305205/1‑93 (MQ=255)
                                     gCTGTGTAACAAGTAAACGACTAATTTGACCGCAAACTTTAGTTTAAGACGCACAATCTGTCATCTAATCAACGGTAAACATTCTTTTTatat                                                    >  1:1422616/1‑93 (MQ=255)
                                      cTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATAtt                                                   <  1:512680/93‑1 (MQ=255)
                                      cTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATAtt                                                   <  1:2080572/93‑1 (MQ=255)
                                       tgtgTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTc                                                  >  2:4346612/1‑93 (MQ=255)
                                       tgtgTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTc                                                  >  2:3450965/1‑93 (MQ=255)
                                       tgtgTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTc                                                  >  2:1985662/1‑93 (MQ=255)
                                         tgtAACAAGTAAACGACTAATTTGGCCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCAc                                                <  1:3736770/93‑1 (MQ=255)
                                          gtAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACg                                               <  1:3127352/93‑1 (MQ=255)
                                           tAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACgg                                              >  1:1923264/1‑93 (MQ=255)
                                            aaCAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGc                                             >  2:1964230/1‑93 (MQ=255)
                                            aaCAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTCTCATCTAATAAACGGTAAACATTCTTCTTATATTCACGGc                                             >  1:3981576/1‑93 (MQ=255)
                                             aCAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCa                                            >  2:89545/1‑93 (MQ=255)
                                              cAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCAt                                           <  2:4657372/93‑1 (MQ=255)
                                               aaGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTTTTTTTATATTTACGGCAtt                                          >  2:1309323/1‑93 (MQ=255)
                                               aaGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCAtt                                          >  1:2534066/1‑93 (MQ=255)
                                                 gTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTAc                                        <  1:4419318/93‑1 (MQ=255)
                                                 gTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTAc                                        >  2:1229212/1‑93 (MQ=255)
                                                  tAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACt                                       <  1:1644868/93‑1 (MQ=255)
                                                    aaCGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGa                                     >  1:4151431/1‑93 (MQ=255)
                                                      cGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATa                                   >  1:4574030/1‑93 (MQ=255)
                                                       gACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATaa                                  >  1:3368677/1‑93 (MQ=255)
                                                          tAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATaaaaa                               >  1:1002668/1‑93 (MQ=255)
                                                           tagctGACCGGAAACTGTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATaaaaaa                              >  2:4223264/5‑93 (MQ=255)
                                                           aaTTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATaaaaaa                              <  2:2400593/93‑1 (MQ=255)
                                                             tttGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGt                            >  1:1238464/1‑93 (MQ=255)
                                                              ttGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTc                           <  1:1461880/93‑1 (MQ=255)
                                                              ttGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTc                           <  1:3243111/93‑1 (MQ=255)
                                                                gACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGc                         >  2:4394037/1‑93 (MQ=255)
                                                                   cGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGctct                      <  2:1365039/93‑1 (MQ=255)
                                                                    ggAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCtctc                     >  2:4585177/1‑93 (MQ=255)
                                                                    ggAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCtctc                     >  2:3723833/1‑93 (MQ=255)
                                                                     gAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCg                    >  2:3697335/1‑93 (MQ=255)
                                                                       aaCTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCa                  >  1:1276081/1‑93 (MQ=255)
                                                                       aaCTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCa                  <  1:433728/93‑1 (MQ=255)
                                                                        aCTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAATATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCAt                 >  2:2890978/1‑93 (MQ=255)
                                                                        aCTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCAt                 <  2:413932/93‑1 (MQ=255)
                                                                        aCTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCAt                 >  2:4293416/1‑93 (MQ=255)
                                                                         cTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATa                <  1:2215558/93‑1 (MQ=255)
                                                                           ttAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATaaa              >  2:2525876/1‑93 (MQ=255)
                                                                            tAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATCACTGATAAAAAAGTCGCTCTCGCATaaaa             <  1:3513795/93‑1 (MQ=255)
                                                                              gCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAAtt           <  2:3642122/93‑1 (MQ=255)
                                                                              gCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAAtt           >  2:2479863/1‑93 (MQ=255)
                                                                                gAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTa         <  2:843782/93‑1 (MQ=255)
                                                                                gAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTa         <  1:3062833/93‑1 (MQ=255)
                                                                                  aaGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTaca       <  2:2637696/93‑1 (MQ=255)
                                                                                    gACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACt     >  1:3839667/1‑93 (MQ=255)
                                                                                    gACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACt     >  2:1513007/1‑93 (MQ=255)
                                                                                    gACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACt     <  1:682239/93‑1 (MQ=255)
                                                                                     aCGCACAATCTGTCATCTAATAAACTGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACtt    <  1:2308106/93‑1 (MQ=255)
                                                                                     aCGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACtt    <  2:3884732/93‑1 (MQ=255)
                                                                                      cGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTg   >  2:1757006/1‑93 (MQ=255)
                                                                                       gCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGc  <  2:4072271/93‑1 (MQ=255)
                                                                                       gCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGc  >  2:3137652/1‑93 (MQ=255)
                                                                                          |                                                                                         
GATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGC  >  NC_000913/2947022‑2947201

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: