| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,971,616 | A→G | L90P (CTG→CCG) | ygeD ← | putative resistance protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,971,616 | 0 | A | G | 96.6% | 349.6 / 1.0 | 118 | L90P (CTG→CCG) | ygeD | putative resistance protein |
| Reads supporting (aligned to +/- strand): ref base A (2/2); new base G (60/53); total (62/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.29e-01 | |||||||||||
Only 100 of 132 total aligned reads displayed.
TCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAGCA > NC_000913/2971527‑2971705 | tCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCt > 2:4019904/1‑93 (MQ=255) gCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTc > 1:2710517/1‑93 (MQ=255) ccGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCa < 1:4735197/93‑1 (MQ=255) cGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGCGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAg > 1:713243/1‑93 (MQ=255) cGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATCCTGGCTGCGCCCAGCCGCTTccg > 1:3828029/1‑91 (MQ=255) cGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAg > 1:806311/1‑93 (MQ=255) cGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCCTCAg > 2:4430349/1‑93 (MQ=255) ggTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAgg > 2:1198589/1‑93 (MQ=255) ggTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAgg > 1:983318/1‑93 (MQ=255) ggTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAgg < 1:793366/93‑1 (MQ=255) ggTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAgg < 2:4301049/93‑1 (MQ=255) tGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGcc > 1:1499494/1‑93 (MQ=255) tGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGcc < 1:622674/93‑1 (MQ=255) aaTAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGt > 2:2326374/1‑93 (MQ=255) aaTAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGt > 2:1113846/1‑93 (MQ=255) ggCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGc > 2:17118/1‑93 (MQ=255) cTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCaa < 2:3613100/93‑1 (MQ=255) tGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCaaa > 2:3971024/1‑93 (MQ=255) tGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCaaa > 1:1202271/1‑93 (MQ=255) gcagcaCCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTTAGGCCGTTGGCaaaa > 1:1500346/1‑92 (MQ=255) cagcaCCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAAca > 1:110995/1‑93 (MQ=255) gcaCCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACAAAAGCAGATACTGGCTGCGCCCACCGGCTTCACGCCGGTGGCAAAcatc > 2:2908554/1‑93 (MQ=255) caCCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAAcatca > 1:196987/1‑93 (MQ=255) cccAACGCCCACCAGCGTATAGCCGAGAAACGGATTGATCCCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAAcatcat < 2:732407/92‑1 (MQ=255) aCCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCTCCCAGCGGCTTCAGGCCGTTGGCAAAcatcat < 2:2758858/93‑1 (MQ=255) ccAACCCCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACatcatc < 1:2773866/93‑1 (MQ=255) ccAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGGCGTTGGCAAACatcatc > 2:111302/1‑93 (MQ=255) ccAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACatgatc > 2:3229800/1‑93 (MQ=255) cAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACAtcatca < 2:1121656/93‑1 (MQ=255) aaCACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCAc > 2:1217534/1‑93 (MQ=255) aaCACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCAc > 1:4188438/1‑93 (MQ=255) acacCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCAcc < 1:4112973/93‑1 (MQ=255) caccccccAGCGTATAGCCGAGAAACGGATTGAAACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCAccc < 1:1373618/93‑1 (MQ=255) cacccaccAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCAccc > 1:1220569/1‑93 (MQ=255) cacccaccAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCAccc < 1:1373619/93‑1 (MQ=255) acccaccAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCg > 1:1866119/1‑93 (MQ=255) accaGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCt > 2:2154983/1‑93 (MQ=255) ccaGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCtt > 2:4290837/1‑93 (MQ=255) ccaGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCtt > 2:483574/1‑93 (MQ=255) caGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCttt < 1:193683/93‑1 (MQ=255) caGCGTATAGCCGAGAAACGGAATGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCttt > 1:3744267/1‑93 (MQ=255) gCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTgg < 1:4568423/93‑1 (MQ=255) gCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTgg < 2:2944173/93‑1 (MQ=255) gCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTgg < 2:1833955/93‑1 (MQ=255) gTATAGCCGAGAAACGGATTGATACCAAGGCAGATACTGGCTCCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCg < 2:3634122/93‑1 (MQ=255) gTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTcgcg > 1:4558989/1‑93 (MQ=255) gTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCg > 2:2121221/1‑93 (MQ=255) taGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAg > 2:247242/1‑93 (MQ=255) taGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAg > 1:2597659/1‑93 (MQ=255) taGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAg < 1:4251161/93‑1 (MQ=255) aGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGc > 2:1765106/1‑93 (MQ=255) gCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCt < 2:3645415/93‑1 (MQ=255) gCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCt < 1:2624774/93‑1 (MQ=255) ccGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTa < 2:2470216/93‑1 (MQ=255) ccGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTa < 2:3345446/93‑1 (MQ=255) gaAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTTGCGAAGCTATCCg > 2:2609472/1‑93 (MQ=255) aCGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCa < 1:4748381/93‑1 (MQ=255) aCGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCa < 2:3581259/93‑1 (MQ=255) aCGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCa > 1:4289969/1‑93 (MQ=255) aCGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCCGCCTTTGGGGGAGATATCCGCCa > 2:397947/1‑93 (MQ=255) cGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCAc > 2:3500599/1‑93 (MQ=255) cGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCAc > 2:3259713/1‑93 (MQ=255) gtaTTGATACGAAGGCAGATACTGGCTGCGCCCAGCTGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCAcc < 2:343777/91‑1 (MQ=255) ggATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTTGCGAAGCTATCCGCCAcc > 1:1545284/1‑93 (MQ=255) ggATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCAcc > 2:4199512/1‑93 (MQ=255) gcttGATACCGAAGCAGAGACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCt < 2:2289178/91‑1 (MQ=255) gATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCCCCt > 1:577870/1‑93 (MQ=255) gATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCt > 1:3543783/1‑93 (MQ=255) tGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGcc < 1:706227/93‑1 (MQ=255) aCCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCCTTGGCGAAGCTATCCGCCACCAGCCCgcc > 2:4000463/1‑91 (MQ=255) ccAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACa < 2:827945/93‑1 (MQ=255) ccAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAACATCATCACCGGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACa < 2:3917517/93‑1 (MQ=255) aaaGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACaaa > 1:2394746/1‑93 (MQ=255) aaaGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACaaa > 1:664822/1‑93 (MQ=255) aaaGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACaaa > 2:4370373/1‑93 (MQ=255) aaGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAAc < 2:876314/93‑1 (MQ=255) aaGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAAc < 1:4706683/93‑1 (MQ=255) aGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACg < 1:4114979/93‑1 (MQ=255) aGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACg > 1:1509979/1‑93 (MQ=255) aGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACg < 2:948834/93‑1 (MQ=255) aGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACg < 1:596453/93‑1 (MQ=255) gCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACgg < 2:1172477/93‑1 (MQ=255) cAGATACTGTCTGCGCCCAGCGTCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGgc < 1:2766063/93‑1 (MQ=255) cAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGgc < 2:1993054/93‑1 (MQ=255) aGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGgcg > 2:3751774/1‑93 (MQ=255) aGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGgcg < 1:1765806/93‑1 (MQ=255) aGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGgcg > 2:4246283/1‑93 (MQ=255) aGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGgcc > 1:3445559/1‑92 (MQ=255) gATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGgcgc > 2:3097107/1‑93 (MQ=255) tACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCaa > 1:4457785/1‑93 (MQ=255) aCTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCaaa > 1:1382186/1‑93 (MQ=255) cgccTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCaaaaa < 2:2324877/90‑1 (MQ=255) gCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCAACCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGa > 1:1975181/1‑93 (MQ=255) cTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGaa < 1:1948409/93‑1 (MQ=255) cTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGaa < 1:1109249/93‑1 (MQ=255) cTGCGCCCAGCAGCTTCAGGGCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAAAGGCGCAAAAAGaa > 1:4237966/1‑93 (MQ=255) gcgcCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATg < 2:3405774/93‑1 (MQ=255) gcCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTa < 1:1601462/93‑1 (MQ=255) cccAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTaa < 1:3036252/93‑1 (MQ=255) ccAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAg > 1:827839/1‑93 (MQ=255) | TCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAGCA > NC_000913/2971527‑2971705 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |