Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,979,391 T→C T272A (ACC→GCC)  araE ← low‑affinity L‑arabinose transport system proton symport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,979,3910TC99.0% 651.2 / ‑3.8 203T272A (ACC→GCC) araElow‑affinity L‑arabinose transport system proton symport protein
Reads supporting (aligned to +/- strand):  ref base T (1/1);  new base C (96/103);  total (97/106)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01

Only 100 of 211 total aligned reads displayed.

CCAGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGTT  >  NC_000913/2979301‑2979480
                                                                                          |                                                                                         
ccAGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCaa                                                                                         >  1:700732/1‑93 (MQ=255)
 cAGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTAATCCCGGCaaa                                                                                        >  1:1058376/1‑93 (MQ=255)
  agagTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAAc                                                                                       <  1:2089686/93‑1 (MQ=255)
   gagTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAAct                                                                                      >  2:590300/1‑93 (MQ=255)
   gagTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAAct                                                                                      >  2:3077932/1‑93 (MQ=255)
   gagTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAAct                                                                                      <  2:356952/93‑1 (MQ=255)
   gagTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAAct                                                                                      >  1:3197329/1‑93 (MQ=255)
     gTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAActgc                                                                                    <  2:3139814/93‑1 (MQ=255)
     gTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAActgc                                                                                    <  1:3906746/93‑1 (MQ=255)
     gTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAActgc                                                                                    <  1:3021089/93‑1 (MQ=255)
      tCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAActgct                                                                                   >  2:2383716/1‑93 (MQ=255)
      tCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAActgct                                                                                   <  2:1185934/93‑1 (MQ=255)
      tCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAActgct                                                                                   <  1:453116/93‑1 (MQ=255)
       cGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAActgctg                                                                                  >  2:3998905/1‑93 (MQ=255)
        gCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACtgctgc                                                                                 >  1:3687544/1‑93 (MQ=255)
         cAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCa                                                                                >  2:3905843/1‑93 (MQ=255)
         cAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCa                                                                                <  1:2322001/93‑1 (MQ=255)
           atcatcTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCACACTGCTGCAtg                                                                              >  1:2371037/1‑92 (MQ=255)
            tcatcTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCg                                                                             >  2:1881155/1‑93 (MQ=255)
            tcatcTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCg                                                                             <  1:1803543/93‑1 (MQ=255)
              atcTGTTGTTCTGTGGTCGTACAGCCCGCCCTTTTGAAGATACGCGGGGCGTAGTACCTGCTGGTGTTAATACCGGCACACTGACGCATCGcc                                                                           >  1:584048/1‑93 (MQ=255)
               tcTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCt                                                                          >  2:2961169/1‑93 (MQ=255)
               tcTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCt                                                                          <  2:4155475/93‑1 (MQ=255)
               tcTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCt                                                                          >  1:1913468/1‑93 (MQ=255)
                 tgttgtTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGc                                                                        >  1:2655390/1‑93 (MQ=255)
                   ttgttCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGcaa                                                                      >  1:183500/1‑93 (MQ=255)
                   ttgttCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGcaa                                                                      >  2:2957771/1‑93 (MQ=255)
                   ttgttCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGcaa                                                                      <  2:4476530/93‑1 (MQ=255)
                    tgttCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGTAAACTGCTGCATCGCCTGcaac                                                                     >  2:2826526/1‑93 (MQ=255)
                     gttCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGcaaca                                                                    >  1:2256273/1‑93 (MQ=255)
                      ttCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGcaacaa                                                                   >  2:2284233/1‑93 (MQ=255)
                      ttCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGcaacaa                                                                   <  2:4238499/93‑1 (MQ=255)
                      ttCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGAAAACTGCTGCATCGCCTGcaacaa                                                                   <  1:2532154/93‑1 (MQ=255)
                        cTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAacaaca                                                                 <  1:2570975/93‑1 (MQ=255)
                           tgGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATAc                                                              >  1:3650241/1‑93 (MQ=255)
                           tgGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATAc                                                              <  1:2494579/93‑1 (MQ=255)
                               cGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCgag                                                          >  2:2250911/1‑93 (MQ=255)
                                gTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCgaga                                                         >  2:4060296/1‑93 (MQ=255)
                                 tAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGaa                                                        >  2:2454238/1‑93 (MQ=255)
                                    aGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAacc                                                     >  2:3847315/1‑92 (MQ=255)
                                     gCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAacac                                                    <  1:3966672/93‑1 (MQ=255)
                                      cccGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAAcaca                                                   <  2:4687022/93‑1 (MQ=255)
                                      cccGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAAcaca                                                   <  2:1245677/93‑1 (MQ=255)
                                       ccGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAg                                                  >  1:1556696/1‑93 (MQ=255)
                                       ccGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAg                                                  <  1:434096/93‑1 (MQ=255)
                                       ccGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAg                                                  <  2:4466488/93‑1 (MQ=255)
                                       ccGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAg                                                  <  1:3614727/93‑1 (MQ=255)
                                         gCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCa                                                <  1:1273315/93‑1 (MQ=255)
                                           cATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCacg                                              >  1:3372845/1‑93 (MQ=255)
                                           cATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCacg                                              >  1:1337881/1‑93 (MQ=255)
                                            aTTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCacga                                             <  2:168737/93‑1 (MQ=255)
                                             ttttGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCacgac                                            <  1:4249365/93‑1 (MQ=255)
                                             ttttGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCacgac                                            <  2:1451072/93‑1 (MQ=255)
                                              tttGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCacgacg                                           >  1:2714429/1‑93 (MQ=255)
                                               ttGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACgacgg                                          >  2:3519967/1‑93 (MQ=255)
                                               ttGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACgacgg                                          <  1:2460446/93‑1 (MQ=255)
                                                tGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACgacgga                                         <  2:1899591/93‑1 (MQ=255)
                                                tGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACgacgga                                         >  2:678922/1‑93 (MQ=255)
                                                tGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACgacgga                                         <  1:3773319/93‑1 (MQ=255)
                                                tGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACgacgga                                         <  1:1223534/93‑1 (MQ=255)
                                                tGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACgacgga                                         <  2:3397180/93‑1 (MQ=255)
                                                 gAAGATACGCGGCGCGTATTACATGATGATGTCCATACCGGCAAACTGCGGCAACGCCTGCAACAACAGGCCGAGAAACGCAGCACgacggac                                        <  2:83904/93‑1 (MQ=255)
                                                 gAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACgacggac                                        <  2:2208400/93‑1 (MQ=255)
                                                   aGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGt                                      >  2:1392311/1‑93 (MQ=255)
                                                   aGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGt                                      <  2:4073234/93‑1 (MQ=255)
                                                    gATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAAAAACATACCGAGAAACACAGCACGACGGACGtt                                     <  2:3338508/93‑1 (MQ=255)
                                                         ccggcgCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGt                                <  2:2641090/92‑1 (MQ=255)
                                                          cggcgCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGtt                               <  2:3458885/93‑1 (MQ=255)
                                                           ggcgCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTg                              >  2:2730813/1‑93 (MQ=255)
                                                           ggcgCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTg                              >  2:3678757/1‑93 (MQ=255)
                                                             cgcgTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGAt                            >  1:3410653/1‑93 (MQ=255)
                                                              gcgTAGTACATGATGATGTTCATACCGGCAAACTTCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATc                           <  1:2973172/93‑1 (MQ=255)
                                                               cgTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCt                          >  2:781583/1‑93 (MQ=255)
                                                                gtagtaCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCtt                         >  1:1117100/1‑93 (MQ=255)
                                                                gtagtaCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCtt                         >  2:3960172/1‑93 (MQ=255)
                                                                 tagtaCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTa                        >  1:485315/1‑93 (MQ=255)
                                                                   gtaCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTaaa                      >  1:532659/1‑93 (MQ=255)
                                                                   gtaCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTaaa                      <  1:4441884/93‑1 (MQ=255)
                                                                   gtaCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTaaa                      <  1:4013458/93‑1 (MQ=255)
                                                                   gtaCATGATGATGATCATACCGGACAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTaca                      <  1:4208247/93‑3 (MQ=255)
                                                                    taCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAAc                     <  2:2087446/93‑1 (MQ=255)
                                                                      cATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATCCCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAg                   <  2:4713309/93‑1 (MQ=255)
                                                                      cATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAg                   <  1:1513929/93‑1 (MQ=255)
                                                                       atgatgatgTTCATACCGGCAAACTGCTTCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGt                  >  1:3565075/1‑93 (MQ=255)
                                                                       atgatgatgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGt                  >  2:318418/1‑93 (MQ=255)
                                                                       atgatgatgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGt                  >  1:194112/1‑93 (MQ=255)
                                                                       atgatgatgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGt                  <  1:2284233/93‑1 (MQ=255)
                                                                         gatgatgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGc                >  2:3421031/1‑93 (MQ=255)
                                                                         gatgatgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGc                <  1:350340/93‑1 (MQ=255)
                                                                            gatgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCGCGACGGACGTTACGGTTGATCTTAAACAGTGCCCa             >  2:1656417/1‑93 (MQ=255)
                                                                             atgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCaa            <  1:963126/93‑1 (MQ=255)
                                                                              tgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAAc           <  1:4187701/93‑1 (MQ=255)
                                                                              tgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAAc           >  1:4104332/1‑93 (MQ=255)
                                                                                 tCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGc        >  1:3676725/1‑93 (MQ=255)
                                                                                   aTACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGccc      <  2:1592792/93‑1 (MQ=255)
                                                                                   aTACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGccc      <  1:2784558/93‑1 (MQ=255)
                                                                                      ccGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGt   >  1:1179658/1‑93 (MQ=255)
                                                                                      ccGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAAACGCACTGt   >  1:850939/1‑93 (MQ=255)
                                                                                       cGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGtt  <  2:4168739/93‑1 (MQ=255)
                                                                                       cGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGtt  <  1:2027031/93‑1 (MQ=255)
                                                                                          |                                                                                         
CCAGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGTT  >  NC_000913/2979301‑2979480

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: