BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,016,772	T→C	C898R (TGC→CGC)	b2878 →	putative oxidoreductase Fe‑S subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,016,772	0	T	C	100.0%	531.8 / NA	165	C898R (TGC→CGC)	b2878	putative oxidoreductase Fe‑S subunit
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (75/90); total (75/90)

Only 100 of 181 total aligned reads displayed.

GCGGAAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCTGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTCCAG  >  NC_000913/3016682‑3016858

gCGGAAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTcgccgc                                                                                      >  1:2864139/1‑93 (MQ=255)

 cGGAAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCgccgcc                                                                                     >  1:3041269/1‑93 (MQ=255)

 cGGAAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCgccgcc                                                                                     <  2:739446/93‑1 (MQ=255)

  ggAAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCt                                                                                    <  1:440351/93‑1 (MQ=255)

  ggAAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCt                                                                                    >  1:3494036/1‑93 (MQ=255)

  ggAAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCt                                                                                    <  2:1809687/93‑1 (MQ=255)

   gAAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCgccgcccc                                                                                   <  1:3311423/93‑3 (MQ=255)

   gAAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTc                                                                                   <  2:1887926/93‑1 (MQ=255)

    aaaTCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCg                                                                                  <  2:2272766/93‑1 (MQ=255)

    aaaTCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCg                                                                                  <  1:230428/93‑1 (MQ=255)

         tATCAACGTAAAGGCGATATCTCTATCACGCTGGTTAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGt                                                                             >  1:834952/1‑93 (MQ=255)

         tATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGt                                                                             <  1:3517138/93‑1 (MQ=255)

           tCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTaa                                                                           <  1:2506869/93‑1 (MQ=255)

           tCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGACGCCTCGAATGTaa                                                                           >  2:3500267/1‑93 (MQ=255)

            cAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAAc                                                                          >  2:3594286/1‑93 (MQ=255)

             aaCGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACt                                                                         >  1:3599896/1‑93 (MQ=255)

              aCGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTa                                                                        <  2:3464906/93‑1 (MQ=255)

               agTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTAc                                                                       <  1:1314923/92‑1 (MQ=255)

                gTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACg                                                                      >  2:2504046/1‑93 (MQ=255)

                gTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACg                                                                      >  2:4420439/1‑93 (MQ=255)

                  aaaGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGtt                                                                    <  1:272877/93‑1 (MQ=255)

                  aaaGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGtt                                                                    <  2:2237208/93‑1 (MQ=255)

                  aaaGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGtt                                                                    >  2:1995061/1‑93 (MQ=255)

                  aaaGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGtt                                                                    >  2:564392/1‑93 (MQ=255)

                   aaGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGTATGTAACTACGttt                                                                   >  1:4557773/1‑93 (MQ=255)

                   aaGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGttt                                                                   >  1:2839518/1‑93 (MQ=255)

                   aaGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGttt                                                                   <  2:3194575/93‑1 (MQ=255)

                   aaGGCGATATCTCTATCACGATGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGttt                                                                   <  2:4088790/93‑1 (MQ=255)

                    aGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTg                                                                  >  2:2840737/1‑93 (MQ=255)

                    aGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTg                                                                  >  1:447496/1‑93 (MQ=255)

                      gCGATATCTCTACCACGCTGGTGACCAGTGACGATCGTGACGCGTTTGTCGCCCAGGAACCCGCTCGCCGCCTCGAATGTAACTACGTTTgca                                                                <  1:4696892/93‑1 (MQ=255)

                        gATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTgcagc                                                              >  2:1690876/1‑93 (MQ=255)

                        gATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTgcagc                                                              <  2:2371496/93‑1 (MQ=255)

                         atatCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTgcagca                                                             >  2:388595/1‑93 (MQ=255)

                         atatCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTgcagca                                                             >  2:406754/1‑93 (MQ=255)

                          tatCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCaa                                                            <  2:3369892/93‑1 (MQ=255)

                          tatCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCaa                                                            >  1:3220134/1‑93 (MQ=255)

                           atCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAg                                                           >  2:270087/1‑93 (MQ=255)

                           atCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAg                                                           <  1:4187925/93‑1 (MQ=255)

                              tctATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAgtgt                                                        >  2:166013/1‑93 (MQ=255)

                              tctATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAgtgt                                                        >  2:3613/1‑93 (MQ=255)

                               ctATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAgtgtg                                                       >  1:2292085/1‑93 (MQ=255)

                                tATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAgtgtgt                                                      >  2:3786837/1‑93 (MQ=255)

                                tATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAgtgtgt                                                      >  1:1379709/1‑93 (MQ=255)

                                tATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAgtgtgt                                                      >  1:285138/1‑93 (MQ=255)

                                    ccGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGAt                                                  <  2:2765327/92‑1 (MQ=255)

                                     cGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATg                                                 <  2:626890/93‑1 (MQ=255)

                                       cTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTc                                               >  2:277466/1‑93 (MQ=255)

                                       cTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTc                                               <  2:1693337/93‑1 (MQ=255)

                                        tgttGAGCAGTGACGATCGTGCCGGGTTTGTCGCCCAGCAATCCGCTCGCCGCCTCGAATGGAACTTCGTTTGCAGCAAGTGTGTGGATGTCt                                              <  2:1533176/90‑1 (MQ=255)

                                        tGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCt                                              <  1:4068451/93‑1 (MQ=255)

                                        tGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGGTTGCAGCAAGTGTGTGGATGTCt                                              >  2:2599103/1‑93 (MQ=255)

                                        tGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCAAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCt                                              >  1:1015119/1‑93 (MQ=255)

                                          gTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGc                                            <  2:4263351/93‑1 (MQ=255)

                                            gAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGccc                                          <  2:184782/93‑1 (MQ=255)

                                               cAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGaa                                       <  2:1278008/93‑1 (MQ=255)

                                                 gTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAAcc                                     >  1:3634195/1‑93 (MQ=255)

                                                  tGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCTAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACcg                                    >  2:264787/1‑93 (MQ=255)

                                                      gATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGcc                                <  1:1064842/93‑1 (MQ=255)

                                                       aTCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCa                               >  2:4630786/1‑93 (MQ=255)

                                                        tCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCaa                              <  2:4708352/93‑1 (MQ=255)

                                                        tCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCaa                              >  2:2475520/1‑93 (MQ=255)

                                                        tCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCaa                              <  1:689654/93‑1 (MQ=255)

                                                           tGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGt                           <  2:638023/93‑1 (MQ=255)

                                                            gACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGtc                          >  1:1024019/1‑93 (MQ=255)

                                                              cgcgTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGtctc                        <  2:1357925/93‑1 (MQ=255)

                                                              cgcgTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGtctc                        <  1:3864644/93‑1 (MQ=255)

                                                              cgcgTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGtctc                        <  1:800155/93‑1 (MQ=255)

                                                               gcgTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTcc                       >  1:2047027/1‑93 (MQ=255)

                                                                cgTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCa                      <  2:4190889/93‑1 (MQ=255)

                                                                 gTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCAt                     >  2:4172549/1‑93 (MQ=255)

                                                                    tGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGc                  <  1:763681/93‑1 (MQ=255)

                                                                     gTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCg                 >  1:2594115/1‑93 (MQ=255)

                                                                     gTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCg                 <  2:335324/93‑1 (MQ=255)

                                                                     gTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCg                 <  1:4143946/93‑1 (MQ=255)

                                                                     gTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTATGCCCGAACCGCGCCAACGTCTCCATTGCg                 >  2:2107138/1‑93 (MQ=255)

                                                                      tCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCgg                >  1:1417162/1‑93 (MQ=255)

                                                                         cccAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTcc             <  1:527882/93‑1 (MQ=255)

                                                                          ccAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTccc            <  1:3409164/93‑1 (MQ=255)

                                                                          ccAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTccc            <  1:933047/93‑1 (MQ=255)

                                                                           cAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCa           <  1:1169664/93‑1 (MQ=255)

                                                                           cAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCa           >  2:1175625/1‑93 (MQ=255)

                                                                            aGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAg          <  1:4620022/93‑1 (MQ=255)

                                                                            aGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAg          >  1:216888/1‑93 (MQ=255)

                                                                            aGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAg          >  1:2466535/1‑93 (MQ=255)

                                                                            aGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAg          >  2:1513985/1‑93 (MQ=255)

                                                                             ggAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAgg         >  2:4397987/1‑93 (MQ=255)

                                                                             ggAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAgg         >  2:3673238/1‑93 (MQ=255)

                                                                              gAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGc        <  2:3724183/93‑1 (MQ=255)

                                                                                aGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAATGCATCCTTTACTGTCCCAgggtc      >  1:3256925/1‑90 (MQ=255)

                                                                                aGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCtt      <  2:4542379/93‑1 (MQ=255)

                                                                                aGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCtt      >  1:4560365/1‑93 (MQ=255)

                                                                                 gCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTc     >  2:663517/1‑93 (MQ=255)

                                                                                 gCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTc     >  1:280825/1‑93 (MQ=255)

                                                                                 gCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTc     <  2:3419437/93‑1 (MQ=255)

                                                                                  ccGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTcc    <  1:1752693/93‑1 (MQ=255)

                                                                                   cgctcgccGCCTCGAATGTAACTGCGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTCCa   <  2:3106636/93‑1 (MQ=255)

                                                                                   cgctcgccGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTCCa   >  2:2495413/1‑93 (MQ=255)

                                                                                    gctcgccGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTCCAg  >  1:3748829/1‑93 (MQ=255)

                                                                                    cctcgccGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTCCAg  <  2:983337/92‑1 (MQ=255)

GCGGAAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCTGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTCCAG  >  NC_000913/3016682‑3016858

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`