BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,018,800	T→C	F80F (TTT→TTC)	b2880 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,018,800	0	T	C	98.1%	504.4 / ‑0.6	159	F80F (TTT→TTC)	b2880	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/3); new base C (80/76); total (80/79)
Fisher's exact test for biased strand distribution p-value = 1.20e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.18e-01

Only 100 of 165 total aligned reads displayed.

GGATCTGGAACTGGACTGGGTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTTATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATTGGTGGTGAAATCGCCGCCCG  >  NC_000913/3018710‑3018889

ggATCTGGAACTGGACTGGGTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCAt                                                                                         >  1:3294150/1‑93 (MQ=255)

ggATCTGGAACTGGACTGGGTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCAt                                                                                         >  1:1572445/1‑93 (MQ=255)

gcaTCTGGAACTGGACTGGGTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCAt                                                                                         <  2:269737/91‑1 (MQ=255)

 gATCTGGAACTGGACTGGGTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTTAtt                                                                                        <  1:3097192/93‑1 (MQ=255)

 gATCTGGAACTGGACTGGGTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCAtt                                                                                        >  1:3191849/1‑93 (MQ=255)

 gATCTGGAACTGGACTGGGTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCAtt                                                                                        >  1:3721153/1‑93 (MQ=255)

  aTCTGGAACTGGACTGGGTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGattcattc                                                                                       >  1:1536428/1‑93 (MQ=255)

   tCTGGAACTGGACTGGGTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTcc                                                                                      >  1:2560005/1‑93 (MQ=255)

   tCTGGAACTGGACTGGGTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTcc                                                                                      <  2:3260590/93‑1 (MQ=255)

   tCTGGAACTGGACTGGGTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTcc                                                                                      <  1:4307444/93‑1 (MQ=255)

   tCTGGAACTGGACTGGGTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTcc                                                                                      <  1:4355488/93‑1 (MQ=255)

   tCTGGAACTGGACTGGGTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTcc                                                                                      <  1:531911/93‑1 (MQ=255)

     tGGAACTGGACTGGGTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTg                                                                                    >  2:1201720/1‑93 (MQ=255)

      ggAACTGGACTGGGTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGc                                                                                   >  2:909930/1‑93 (MQ=255)

            ggactggGTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCt                                                                             >  1:1508325/1‑93 (MQ=255)

             gactggGTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTg                                                                            >  2:1020286/1‑93 (MQ=255)

             gactggGTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTg                                                                            <  2:2835792/93‑1 (MQ=255)

              actggGTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGc                                                                           <  1:4044341/93‑1 (MQ=255)

               ctggGTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCg                                                                          >  2:1384234/1‑93 (MQ=255)

               ctggGTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCg                                                                          >  1:292045/1‑93 (MQ=255)

                tggGTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGt                                                                         <  1:2709316/93‑1 (MQ=255)

                 gggTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTg                                                                        >  2:4208034/1‑93 (MQ=255)

                 gggTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTg                                                                        >  1:1163579/1‑93 (MQ=255)

                 gggTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTg                                                                        >  1:1163578/1‑93 (MQ=255)

                   gTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGaa                                                                      <  1:151646/93‑1 (MQ=255)

                    ttGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAg                                                                     >  1:1060080/1‑93 (MQ=255)

                    ttGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAg                                                                     <  1:2391401/93‑1 (MQ=255)

                      gACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGcc                                                                   <  2:3735517/93‑1 (MQ=255)

                      gACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGcc                                                                   >  1:3626561/1‑93 (MQ=255)

                      gACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGcc                                                                   <  1:3229390/93‑1 (MQ=255)

                       aCTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGccc                                                                  >  2:1288093/1‑93 (MQ=255)

                       aCTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGccc                                                                  <  1:2434397/93‑1 (MQ=255)

                        cTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCt                                                                 <  1:636408/93‑1 (MQ=255)

                        cTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCt                                                                 <  2:2709523/93‑1 (MQ=255)

                         tGGGATAACGGTGCACTGCGGATTGTCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGccgtg                                                                >  1:1567860/1‑90 (MQ=255)

                          gggATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCg                                                               >  1:427406/1‑93 (MQ=255)

                          gggATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCg                                                               <  2:4490740/93‑1 (MQ=255)

                            gATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGt                                                             <  1:3301481/93‑1 (MQ=255)

                             aTAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCggct                                                            >  2:798909/1‑91 (MQ=255)

                             aTAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGtt                                                            <  1:3455556/93‑1 (MQ=255)

                             aTAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGtt                                                            >  2:798910/1‑93 (MQ=255)

                                aCGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTTATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTg                                                         <  2:4028163/93‑1 (MQ=255)

                                aCGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTg                                                         >  1:384490/1‑93 (MQ=255)

                                aCGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTg                                                         >  1:4593792/1‑93 (MQ=255)

                                  ggTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGtt                                                       >  1:1676731/1‑93 (MQ=255)

                                  ggTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGtt                                                       >  2:3015706/1‑93 (MQ=255)

                                     gCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTAc                                                    <  2:3452376/93‑1 (MQ=255)

                                     gCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTAc                                                    <  2:3556200/93‑1 (MQ=255)

                                       aCTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTc                                                  <  2:4720327/93‑1 (MQ=255)

                                       aCTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGGGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTc                                                  >  2:2438525/1‑93 (MQ=255)

                                        cTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCa                                                 >  1:2940458/1‑93 (MQ=255)

                                        cTGCGGATGGTCGCAATGTCTCGCTTGCAGCCACTGCTTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCa                                                 <  1:4531149/93‑1 (MQ=255)

                                         tGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCAc                                                <  1:2590647/93‑1 (MQ=255)

                                         tGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCAc                                                >  1:303405/1‑93 (MQ=255)

                                         tGCGGATTGGCGCAATGGCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCAc                                                >  1:1803861/1‑93 (MQ=255)

                                          gCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACg                                               >  2:154641/1‑93 (MQ=255)

                                             gATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCa                                            <  2:1791440/93‑1 (MQ=255)

                                              aTTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCAt                                           >  2:3666578/1‑93 (MQ=255)

                                                  gcgcAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTc                                       >  2:4043167/1‑93 (MQ=255)

                                                    gcAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGt                                     >  2:2301275/1‑93 (MQ=255)

                                                      aaTGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTaa                                   >  1:3274969/1‑93 (MQ=255)

                                                       aTGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAAt                                  >  1:288782/1‑93 (MQ=255)

                                                       aTGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAAt                                  <  1:2020697/93‑1 (MQ=255)

                                                       aTGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAAt                                  <  1:2191839/93‑1 (MQ=255)

                                                       aTGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGCTCGTAAt                                  >  2:2424088/1‑93 (MQ=255)

                                                         gTCTCGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCa                                <  2:3360384/93‑1 (MQ=255)

                                                          tctcGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAg                               >  2:1180449/1‑93 (MQ=255)

                                                          tctcGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAg                               <  1:143510/93‑1 (MQ=255)

                                                           ctcGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGt                              <  2:3520822/93‑1 (MQ=255)

                                                            tcGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTc                             <  2:1996855/93‑1 (MQ=255)

                                                            tcGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTc                             <  2:4073209/93‑1 (MQ=255)

                                                            tcGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTc                             >  1:1194096/1‑93 (MQ=255)

                                                             cGCTTGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTca                            <  2:23631/93‑2 (MQ=255)

                                                                ttGCAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTCTGTTTACTCACGCCATGTTCGTAATCAGTCGAcc                         >  2:2376107/1‑93 (MQ=255)

                                                                 tccAGCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCa                        <  1:1829639/91‑1 (MQ=255)

                                                                     gCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATtgg                    >  1:1337066/1‑93 (MQ=255)

                                                                     gCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATtgg                    >  1:1248710/1‑93 (MQ=255)

                                                                     gCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATtgg                    <  1:510141/93‑1 (MQ=255)

                                                                     gCCACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATtgg                    >  2:171584/1‑93 (MQ=255)

                                                                      ccACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATtggt                   <  2:382879/93‑1 (MQ=255)

                                                                      ccACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATtggt                   <  2:3532861/93‑1 (MQ=255)

                                                                       cACTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATtggtg                  >  2:3014600/1‑93 (MQ=255)

                                                                        aCTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATtggtgg                 >  1:1043675/1‑93 (MQ=255)

                                                                        aCTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATtggtgg                 >  1:472747/1‑93 (MQ=255)

                                                                        aCTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATtggtgg                 >  1:488196/1‑93 (MQ=255)

                                                                         cTGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATTggtggt                >  1:3038364/1‑93 (MQ=255)

                                                                          tGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATTGgtggtg               <  2:1854935/93‑1 (MQ=255)

                                                                          tGCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATTGgtggtg               >  1:1899625/1‑93 (MQ=255)

                                                                           gCGTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATTGGTGGTGa              >  1:522460/1‑93 (MQ=255)

                                                                            cgggATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATTGGTGGTGaa             >  2:2317856/4‑93 (MQ=255)

                                                                             gTGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATTGGTGGTGaaa            >  2:563487/1‑93 (MQ=255)

                                                                              tGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATTGGTGGTGAAAt           <  2:434936/93‑1 (MQ=255)

                                                                              tGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATTGGTGGTGAAAt           <  1:4282659/93‑1 (MQ=255)

                                                                              tGATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATTGGTGGTGAAAt           <  1:2051353/93‑1 (MQ=255)

                                                                               gATGCGCGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATTGGTGGTGAAATc          >  1:4451213/1‑93 (MQ=255)

                                                                                  gcgcGATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATTGGTGGTGAAATcgcc       <  2:2518226/93‑1 (MQ=255)

                                                                                  gcgcGATTCATGCCTGCCGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATTGGTGGTGAAATcgcc       <  2:3515890/93‑1 (MQ=255)

                                                                                   cgcgATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATTGGTGGTGAAATcgccg      <  2:484678/93‑1 (MQ=255)

                                                                                    gcgATTCATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATTGGTGGTGAAATcgccgc     <  2:370137/93‑1 (MQ=255)

                                                                                       attcattcCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATTGGTGGTGAAATCGccgcccg  >  2:3415626/1‑93 (MQ=255)

GGATCTGGAACTGGACTGGGTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTTATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATTGGTGGTGAAATCGCCGCCCG  >  NC_000913/3018710‑3018889

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`