BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,130,334	A→G	V30V (GTT→GTC)	b2983 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,130,334	0	A	G	100.0%	456.6 / NA	140	V30V (GTT→GTC)	b2983	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (61/79); total (61/79)

Only 100 of 163 total aligned reads displayed.

CGATTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACAACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCCAA  >  NC_000913/3130244‑3130423

 gATTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCGTCCCTTTACCGGGACACGAGAGCGCCAACAGACCCAG‑CCAAGCGCTCccgaca                                                                                        >  1:377187/1‑93 (MQ=255)

 gATTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCacgaca                                                                                        <  1:79817/93‑1 (MQ=255)

 gATTGCACAATCACCAGTACGCCAAACATGGCGGGCGGCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAT‑CAAGGCGCTCacgaca                                                                                        >  1:1716364/1‑93 (MQ=255)

 aagtGCAAAATCCCCAGTACCCCAAACATGGGGGGCGTCACCCCTTTCCCGGCACACGAGAGCGCCAACAGCCCCAG‑CAAGGCGCTCacgaca                                                                                        <  2:892130/90‑1 (MQ=255)

  aTTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCCTTACCGGCACACCAGAGCGCCAACAGAACCAG‑CAAGGGGCTCACGACAt                                                                                       >  2:3256421/1‑93 (MQ=255)

   ttGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACAtt                                                                                      >  1:4716653/1‑93 (MQ=255)

      cacaATCACCTGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACt                                                                                   <  1:4552505/93‑1 (MQ=255)

      cacaATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACt                                                                                   >  2:1489779/1‑93 (MQ=255)

      cacaATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACt                                                                                   <  2:1421156/93‑1 (MQ=255)

       acaATCACCAGTACGCCAAACATGGCGGGCGGCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTg                                                                                  >  1:870873/1‑93 (MQ=255)

         aaTCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGAACCAG‑CAAGGCGCTCACGACCTTACTGGa                                                                                >  1:3588526/1‑93 (MQ=255)

           tCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGc                                                                              <  1:1229352/93‑1 (MQ=255)

           tCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGc                                                                              >  2:2427166/1‑93 (MQ=255)

           tCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAAGCGCTCACGACATTACTGGAGc                                                                              >  2:4303179/1‑93 (MQ=255)

            cACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGcc                                                                             <  2:806794/93‑1 (MQ=255)

            cACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGcc                                                                             <  1:4059679/93‑1 (MQ=255)

            cACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGcc                                                                             >  1:3926487/1‑93 (MQ=255)

             aCCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTTGAGCCt                                                                            >  2:1714518/1‑93 (MQ=255)

             aCCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAAGCGCTCACGACATTACTGGAGCCt                                                                            >  2:3841790/1‑93 (MQ=255)

               cAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTaa                                                                          >  1:2887190/1‑93 (MQ=255)

                aGTACCCAAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGCCCCAG‑AAAGGCGCTCACGACATTACTGGAGCCTAAc                                                                         <  1:4324013/93‑1 (MQ=255)

                  tACGCCAAACATGGCGGGCGTCATCCCCTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGTCCACGCCCTTACTGGCGCCGAAccg                                                                       >  1:2451683/1‑92 (MQ=255)

                   agcacAAACATGTCCTGCTTCCTCCCTTGCCCGGCGCACGCGAGCGCCACCGCACCTTG‑CAAGGTGTTCACCACATTACTGGAGCCTAAACAg                                                                      <  2:4078237/89‑1 (MQ=255)

                   aCGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAg                                                                      <  1:3227717/93‑1 (MQ=255)

                    cGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAgg                                                                     <  2:2063445/93‑1 (MQ=255)

                      ccAAACATGGCGGGCGTCATCCCTTTACCCGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACCGGAGACTAACCAGgcg                                                                   >  2:1633946/1‑93 (MQ=255)

                       cAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGgcgc                                                                  <  1:1372478/93‑1 (MQ=255)

                       cAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGgcgc                                                                  >  2:2671274/1‑93 (MQ=255)

                       cAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGgcgc                                                                  <  1:4602133/93‑1 (MQ=255)

                       aaaaCATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGCCCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGgcgc                                                                  <  2:2052881/92‑1 (MQ=255)

                        aaaCATGGCGGGCGTCATCCCTTTCCCGGCACACGAGAGCGCAAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTACCCAGGCGCt                                                                 <  2:3001568/93‑1 (MQ=255)

                        aaaCATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCt                                                                 >  2:3221548/1‑93 (MQ=255)

                         aaCATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCtt                                                                >  2:2095086/1‑92 (MQ=255)

                          aCATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTAt                                                               >  1:4479746/1‑93 (MQ=255)

                           cagggcgggcgTCCTCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAGGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTAtt                                                              <  2:3590842/90‑1 (MQ=255)

                            aTGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTg                                                             >  2:1281039/1‑93 (MQ=255)

                             tGGCGGGCTTCATCCCTTCCCCGGCACACGAGAGCGCCAACAGCCCCAG‑CAGGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGc                                                            <  1:4245295/93‑1 (MQ=255)

                             tGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CCAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGc                                                            >  1:210953/1‑93 (MQ=255)

                             tGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGc                                                            <  1:670734/93‑1 (MQ=255)

                                ggggcgTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGaa                                                         <  2:755132/92‑1 (MQ=255)

                                cgggcgTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGaa                                                         <  1:1697488/93‑1 (MQ=255)

                                 gggcgTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGaat                                                        >  2:2431264/1‑93 (MQ=255)

                                  ggcgTCACCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGaata                                                       >  2:2016614/1‑93 (MQ=255)

                                    cgTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGaataat                                                     <  2:2456712/93‑1 (MQ=255)

                                    cgTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGaataat                                                     <  1:698714/93‑1 (MQ=255)

                                    cgTCACCCCTTTACCGGCACACGAGAGCGCCAACAGCCCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGaataat                                                     <  1:4305702/93‑1 (MQ=255)

                                      tCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATgg                                                   <  1:2963477/93‑1 (MQ=255)

                                      gcgccccTTACCCGGCACACGAGAGCG‑CAATGGGCCCGGAAAAGCCGTCCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATgg                                                   <  1:3426711/89‑1 (MQ=255)

                                       cATCCCTTTACCGGCACGCGAGAGCCCCAACAGCCCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGt                                                  <  2:2728099/93‑1 (MQ=255)

                                       cATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGt                                                  >  1:1212663/1‑93 (MQ=255)

                                       cATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGt                                                  >  1:4270001/1‑93 (MQ=255)

                                       cATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGt                                                  <  1:4433106/93‑1 (MQ=255)

                                       cATCCCTTTACCGGCACACGAGAGCACCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGt                                                  <  2:171689/93‑1 (MQ=255)

                                        aTCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTg                                                 <  1:2417441/93‑1 (MQ=255)

                                           ccTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGa                                              >  1:3576986/1‑93 (MQ=255)

                                             tttACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGaaa                                            <  2:4676434/93‑1 (MQ=255)

                                             tttACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGaaa                                            <  2:1600287/93‑1 (MQ=255)

                                             tttACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAAGGGTGCGaaa                                            <  1:3291919/93‑1 (MQ=255)

                                             tttACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCGCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGaaa                                            <  2:827075/93‑1 (MQ=255)

                                              ttACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAAc                                           <  2:3015458/93‑1 (MQ=255)

                                              ttACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAAc                                           >  2:3231094/1‑93 (MQ=255)

                                              ttACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAAc                                           >  2:3171718/1‑93 (MQ=255)

                                              ttACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAAc                                           <  2:1313895/93‑1 (MQ=255)

                                              ttACCAGCACACGAGGCCCCCAACAGACCCAG‑CAAGGCGCTCCCGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAAc                                           <  1:4123273/93‑1 (MQ=255)

                                               tACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCTCTATTGCGAATAATGGTGCGAAAcg                                          <  1:2481478/93‑1 (MQ=255)

                                               tACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAAcg                                          <  1:2486307/93‑1 (MQ=255)

                                                 ccGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAAcgcg                                        >  1:2551942/1‑93 (MQ=255)

                                                   ggCACACGAGAGCGCCAACAGACCCAG‑CAGGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGcc                                      <  1:3683013/93‑1 (MQ=255)

                                                   ggCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGcc                                      <  2:2206415/93‑1 (MQ=255)

                                                    gCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCa                                     <  2:2259503/93‑1 (MQ=255)

                                                      ccaggagaGCGCAAACAGCCCCAG‑CAGGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATc                                   <  2:1093710/89‑1 (MQ=255)

                                                       cacGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCt                                  >  2:2865145/1‑93 (MQ=255)

                                                       cacGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCt                                  >  2:3394030/1‑93 (MQ=255)

                                                       cacGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCt                                  >  1:1758624/1‑93 (MQ=255)

                                                        acGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTg                                 >  1:783356/1‑93 (MQ=255)

                                                         cGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGc                                >  2:3077995/1‑93 (MQ=255)

                                                            gagCGCCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATCATGCTGCGAAACGCGCCATCTGCaaa                             >  1:1861941/1‑93 (MQ=255)

                                                              gcgcCAACAGGCCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAAcc                           <  2:2202958/93‑1 (MQ=255)

                                                                gcCAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCaa                         <  1:2357026/93‑1 (MQ=255)

                                                                 ccAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAAt                        <  2:3300564/93‑1 (MQ=255)

                                                                 ccAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAAt                        >  2:3458010/1‑93 (MQ=255)

                                                                 ccAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAAt                        <  2:3644927/93‑1 (MQ=255)

                                                                  cAACAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATg                       >  2:4494825/1‑93 (MQ=255)

                                                                   aaCAGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGt                      >  1:2781562/1‑93 (MQ=255)

                                                                     cAGCCCAAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGttt                    <  1:1891316/93‑1 (MQ=255)

                                                                      aGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTg                   >  2:549788/1‑93 (MQ=255)

                                                                      aGACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTg                   >  2:4563057/1‑93 (MQ=255)

                                                                       gACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGa                  <  2:1688537/93‑1 (MQ=255)

                                                                       gACCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGa                  >  2:1109553/1‑93 (MQ=255)

                                                                       gACCCAG‑CAAGGAGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACAAATGTTTGa                  >  2:4065017/1‑93 (MQ=255)

                                                                        aCCCAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGAt                 <  2:432361/93‑1 (MQ=255)

                                                                           cAG‑CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGtt              <  2:2937411/93‑1 (MQ=255)

                                                                               cAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTaaa           <  1:2136899/93‑1 (MQ=255)

                                                                                 aGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAAc         >  1:310122/1‑93 (MQ=255)

                                                                                   gcgcTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAAccc       <  1:2880104/93‑1 (MQ=255)

                                                                                    cgcTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATAGTGCGAAACGCGCCATCTGCAAAGCAATGTTTGATGCTAAAACCCg      >  2:2549991/1‑93 (MQ=255)

                                                                                     ccccacgACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGc     <  1:4182285/90‑1 (MQ=255)

                                                                                       tCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCCa   >  2:648236/1‑93 (MQ=255)

                                                                                       tCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCCa   >  1:1488601/1‑93 (MQ=255)

                                                                                        cacgACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCCaa  >  1:1518456/1‑93 (MQ=255)

CGATTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAG‑CAAGGCGCTCACAACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCCAA  >  NC_000913/3130244‑3130423

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`