Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,286,677 A→G T75A (ACT→GCT)  yraJ → putative outer membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,286,6770AG98.4% 821.6 / ‑1.0 258T75A (ACT→GCT) yraJputative outer membrane protein
Reads supporting (aligned to +/- strand):  ref base A (2/2);  new base G (132/121);  total (134/124)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 261 total aligned reads displayed.

TTCGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAACTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCA  >  NC_000913/3286587‑3286766
                                                                                          |                                                                                         
ttCGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCt                                                                                         <  2:520812/93‑1 (MQ=255)
    aCCCAATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATc                                                                                     <  2:487162/93‑1 (MQ=255)
     ccccATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCa                                                                                    >  1:1800403/1‑93 (MQ=255)
      cccATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAg                                                                                   <  1:1527074/93‑1 (MQ=255)
       ccATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAgg                                                                                  >  2:4403863/1‑93 (MQ=255)
       ccATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAgg                                                                                  >  1:4448569/1‑93 (MQ=255)
       ccATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGCTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAgg                                                                                  >  2:1012663/1‑93 (MQ=255)
        cATTATGCTGGAAACCACAAAAAGTGGTATGCATACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGt                                                                                 <  1:360155/93‑1 (MQ=255)
        cATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGt                                                                                 >  1:774816/1‑93 (MQ=255)
        cATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGt                                                                                 <  1:4000551/93‑1 (MQ=255)
        cATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGt                                                                                 <  1:2494612/93‑1 (MQ=255)
         aTTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGtt                                                                                >  2:727683/1‑93 (MQ=255)
           tATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGa                                                                              <  2:1676868/93‑1 (MQ=255)
           tATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGa                                                                              >  1:1324731/1‑93 (MQ=255)
           tATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGa                                                                              <  1:1720915/93‑1 (MQ=255)
              gCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGatat                                                                           >  1:3369336/1‑93 (MQ=255)
                tGGAAACCAAAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGACCTTATCAGGTTGATATCt                                                                         <  2:4492222/93‑1 (MQ=255)
                 ggAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTg                                                                        <  1:4527356/93‑1 (MQ=255)
                 ggAAACCAAAAAAAGTGGGATGCAAACAACCGATCTGTCGCGGTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTg                                                                        <  1:286008/93‑1 (MQ=255)
                  gAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTgg                                                                       <  1:3244229/93‑1 (MQ=255)
                   aaaCCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGc                                                                      <  1:216359/93‑1 (MQ=255)
                     aCCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTg                                                                    >  2:2445780/1‑93 (MQ=255)
                      ccAAAAAAAGTGATATTCAACCACCTGATCTTTCGCTTTTTTCAAAAAAATATGCACAACTACCAGGAACTTATCAGGTTGATATCTGGCTGa                                                                   <  2:2759411/93‑1 (MQ=255)
                        acaAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAAt                                                                 >  2:1313624/1‑93 (MQ=255)
                        acaAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAAt                                                                 <  1:1886018/93‑1 (MQ=255)
                         caAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATa                                                                >  2:1526336/1‑93 (MQ=255)
                           aaaaGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATaaa                                                              >  2:2348581/1‑93 (MQ=255)
                             aaGTGGTATGCAAACAACAGCTCTGTCGCGTTTTGCAAAACAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATaaaaa                                                            <  1:3718072/93‑1 (MQ=255)
                             aaGTGGAATGCAAAAAACCGATATGTCGAGCTTTTCAAAAAAATATGCACAACTACCACGAACTTATCAGGTTGATATCTGGCTGTAaaaaaa                                                            >  2:4654299/1‑93 (MQ=255)
                                tGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAaagaa                                                         <  2:435460/93‑1 (MQ=255)
                                 ggTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAaagaag                                                        >  1:3934991/1‑93 (MQ=255)
                                 ggTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAaagaag                                                        <  2:3596249/93‑1 (MQ=255)
                                   tATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGt                                                      >  1:1923644/1‑93 (MQ=255)
                                   tATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGt                                                      >  1:1036221/1‑93 (MQ=255)
                                      gCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTc                                                   >  1:4292428/1‑93 (MQ=255)
                                       cAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGGATAAAAAGAAGGGTTca                                                  >  2:3389837/1‑93 (MQ=255)
                                       cAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTca                                                  <  1:1572521/93‑1 (MQ=255)
                                        caacaacCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGGTTcac                                                 >  1:2549418/2‑93 (MQ=255)
                                        aaaCAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTcac                                                 >  2:1777893/1‑93 (MQ=255)
                                        aaaCAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTcac                                                 >  2:2689650/1‑93 (MQ=255)
                                         aacaacCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTcaca                                                <  2:1109495/93‑1 (MQ=255)
                                         aacaacCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTcaca                                                <  1:4082487/93‑1 (MQ=255)
                                          acaacCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAg                                               >  1:3489868/1‑93 (MQ=255)
                                           caacCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGa                                              >  2:1066310/1‑93 (MQ=255)
                                            cacCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGaa                                             <  2:2198906/92‑1 (MQ=255)
                                             acCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGaaa                                            >  2:3372247/1‑93 (MQ=255)
                                              ccGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGaaaa                                           >  1:1416770/1‑93 (MQ=255)
                                               cGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGaaaaa                                          <  1:1666482/93‑1 (MQ=255)
                                                gATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGaaaaaa                                         >  2:2254890/1‑93 (MQ=255)
                                                 aTCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGaaaaaaa                                        <  2:3052914/93‑1 (MQ=255)
                                                 aTCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGaaaaaaa                                        <  1:3637036/93‑1 (MQ=255)
                                                  tCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAAt                                       >  2:3795885/1‑93 (MQ=255)
                                                   cTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAAtt                                      >  2:799331/1‑93 (MQ=255)
                                                     ggcgcgTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTAc                                    <  2:4299627/91‑1 (MQ=255)
                                                     gTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTAc                                    >  1:2748218/1‑93 (MQ=255)
                                                     gTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTAc                                    <  2:3194551/93‑1 (MQ=255)
                                                      tCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATATAAAGAAGGTTTCACAGAAAAAAATTACa                                   >  2:2513134/1‑93 (MQ=255)
                                                      tCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACa                                   >  1:2139536/1‑93 (MQ=255)
                                                      tCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACa                                   <  1:2358366/93‑1 (MQ=255)
                                                      tCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACa                                   >  1:3698120/1‑93 (MQ=255)
                                                      tCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACa                                   <  2:4280565/93‑1 (MQ=255)
                                                          gTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTa                               <  1:821298/93‑1 (MQ=255)
                                                           tttttCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTAc                              >  1:697793/1‑93 (MQ=255)
                                                           tttttCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTAc                              >  1:4727235/1‑93 (MQ=255)
                                                            ttttCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTAcc                             <  2:1355358/93‑1 (MQ=255)
                                                            ttttCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTAcc                             <  2:3233345/93‑1 (MQ=255)
                                                            ttttCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTAcc                             <  1:2202789/93‑1 (MQ=255)
                                                            ttttCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTAcc                             <  2:4014442/93‑1 (MQ=255)
                                                            ttttCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTAcc                             <  1:2234625/93‑1 (MQ=255)
                                                            ttttCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTAcc                             >  1:1636930/1‑93 (MQ=255)
                                                             tttCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCg                            >  1:2065860/1‑93 (MQ=255)
                                                             tttCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCg                            >  1:2649019/1‑93 (MQ=255)
                                                              ttCAAAAAAATATGCACACCTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGc                           <  2:4186147/93‑1 (MQ=255)
                                                               tCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGcc                          <  1:1482137/93‑1 (MQ=255)
                                                                 aaaaaaaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCaa                        >  1:2908779/1‑93 (MQ=255)
                                                                  aaaaaaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAAt                       <  2:2962500/93‑1 (MQ=255)
                                                                  aaaaaaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAAt                       <  2:1234395/93‑1 (MQ=255)
                                                                  aaaaaaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAAt                       >  2:3424804/1‑93 (MQ=255)
                                                                   aaaaaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATg                      <  2:1758788/93‑1 (MQ=255)
                                                                    aaaaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGc                     <  1:4164741/93‑1 (MQ=255)
                                                                    aaaaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGc                     >  2:4697733/1‑93 (MQ=255)
                                                                    aaaaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCAAATga                     >  1:4621266/1‑92 (MQ=255)
                                                                     aaaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCa                    <  1:3629126/93‑1 (MQ=255)
                                                                      aaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCag                   <  2:2002140/93‑1 (MQ=255)
                                                                      aaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCag                   >  2:1181189/1‑93 (MQ=255)
                                                                       atatGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCaga                  <  2:2132513/93‑1 (MQ=255)
                                                                        tatGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCagag                 <  1:3110749/93‑1 (MQ=255)
                                                                        tatGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCagag                 >  2:1506632/1‑93 (MQ=255)
                                                                         atGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGc                <  1:2590972/93‑1 (MQ=255)
                                                                               aaCTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTc          <  1:1755180/93‑1 (MQ=255)
                                                                                aCTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCt         >  2:3530661/1‑93 (MQ=255)
                                                                                aCTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCt         >  2:2844990/1‑93 (MQ=255)
                                                                                 cTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTg        >  1:3518029/1‑93 (MQ=255)
                                                                                  tACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGc       >  2:2049015/1‑93 (MQ=255)
                                                                                     cAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGc    >  1:953468/1‑93 (MQ=255)
                                                                                     cAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGc    >  2:881907/1‑93 (MQ=255)
                                                                                     cAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGc    <  2:599234/93‑1 (MQ=255)
                                                                                      aGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGATTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGcc   >  1:3864825/1‑93 (MQ=255)
                                                                                       ggAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCca  >  2:2920279/1‑93 (MQ=255)
                                                                                       ggAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCca  >  1:1129763/1‑93 (MQ=255)
                                                                                          |                                                                                         
TTCGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAACTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCA  >  NC_000913/3286587‑3286766

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: