Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,305,090 C→T D155N (GAC→AAC)  deaD ← inducible ATP‑independent RNA helicase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,305,0900CT98.1% 537.6 / ‑2.0 157D155N (GAC→AAC) deaDinducible ATP‑independent RNA helicase
Reads supporting (aligned to +/- strand):  ref base C (2/1);  new base T (88/66);  total (90/67)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.17e-01

Only 100 of 167 total aligned reads displayed.

TCGATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTCCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACAGA  >  NC_000913/3304999‑3305178
                                                                                           |                                                                                        
tCGATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTcc                                                                                         <  2:3903902/93‑1 (MQ=255)
 cGATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTCca                                                                                        <  1:4019995/93‑1 (MQ=255)
  gATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGATTGCCACGTTTCAGGTGGTTcag                                                                                       >  2:1118164/1‑93 (MQ=255)
  gATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTcag                                                                                       >  1:4286089/1‑93 (MQ=255)
  gATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTcag                                                                                       >  2:530713/1‑93 (MQ=255)
  gATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTcag                                                                                       >  1:579934/1‑93 (MQ=255)
  gATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTcag                                                                                       >  2:2854354/1‑93 (MQ=255)
    tGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGTTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTcagca                                                                                     <  2:39661/93‑1 (MQ=255)
    tGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTcagca                                                                                     >  1:532190/1‑93 (MQ=255)
    tGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTcagca                                                                                     <  1:1655575/93‑1 (MQ=255)
    tGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTcagca                                                                                     >  2:2160429/1‑93 (MQ=255)
    tGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTcagca                                                                                     >  1:2243187/1‑93 (MQ=255)
    tGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTcagca                                                                                     >  1:2243188/1‑93 (MQ=255)
    tGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTcagca                                                                                     >  2:3514562/1‑93 (MQ=255)
     gAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTcagcag                                                                                    <  2:445868/93‑1 (MQ=255)
        gCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAATCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCATACg                                                                                 <  2:3963347/93‑1 (MQ=255)
        gCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACg                                                                                 >  2:3582110/1‑93 (MQ=255)
         cccATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACgg                                                                                <  2:242924/93‑1 (MQ=255)
         cccATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACgg                                                                                >  1:709078/1‑93 (MQ=255)
         cccATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACgg                                                                                <  2:3842350/93‑1 (MQ=255)
          ccATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGc                                                                               >  2:787630/1‑93 (MQ=255)
          ccATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGc                                                                               >  2:2720743/1‑93 (MQ=255)
           cATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGcc                                                                              >  1:3074522/1‑93 (MQ=255)
           cATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGcc                                                                              <  2:72053/93‑1 (MQ=255)
           cATGCGCAGCAGTTCGTCAGCTTCATCCAGAACCAGGCCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGcc                                                                              <  1:4263319/93‑1 (MQ=255)
            aTGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGccc                                                                             >  1:3080825/1‑93 (MQ=255)
             tGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCg                                                                            >  1:2696054/1‑93 (MQ=255)
                gcagcaTTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAg                                                                         >  2:3328546/1‑93 (MQ=255)
                gcagcaTTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAg                                                                         >  1:3374140/1‑93 (MQ=255)
                gcagcaTTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAg                                                                         <  1:1375168/93‑1 (MQ=255)
                gcagcaTTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGGGCCACGTTTCAGGTGGTTAAGCAGACGGCCCGGAg                                                                         >  2:3431793/1‑93 (MQ=255)
                 cagcaTTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGt                                                                        >  1:104201/1‑93 (MQ=255)
                  agcaTTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTa                                                                       >  1:769446/1‑93 (MQ=255)
                   acaTTTCGTCAGGTTCATCCAGAACCAGGCCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTAc                                                                      <  2:3453371/92‑1 (MQ=255)
                      tttCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCgc                                                                   >  1:2923197/1‑92 (MQ=255)
                      tttCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGa                                                                   >  1:2721677/1‑93 (MQ=255)
                      tttCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGa                                                                   >  1:2923198/1‑93 (MQ=255)
                         cGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACaa                                                                <  2:2811223/93‑1 (MQ=255)
                          gTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGCGGTCCAGCGAGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGCAGAACCGACaaa                                                               >  2:860384/1‑92 (MQ=255)
                           tCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCCGGTGCTTCAGCAGACCGCACGGAGTACAGACAACg                                                              >  2:843921/1‑93 (MQ=255)
                              gCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATc                                                           <  2:958766/93‑1 (MQ=255)
                               cTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCt                                                          <  2:3398649/93‑1 (MQ=255)
                               cTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCt                                                          <  1:1638408/93‑1 (MQ=255)
                                ttCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTg                                                         >  1:3459355/1‑93 (MQ=255)
                                 taaTCCAGAACCAGCCCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGc                                                        <  1:1233593/91‑1 (MQ=255)
                                 tCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGc                                                        <  2:501353/93‑1 (MQ=255)
                                 tCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGc                                                        <  1:1016255/93‑1 (MQ=255)
                                   aTCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCgg                                                      <  1:1505541/93‑1 (MQ=255)
                                    tCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGc                                                     >  1:227304/1‑93 (MQ=255)
                                    tCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGc                                                     >  1:2798969/1‑93 (MQ=255)
                                    tCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGc                                                     >  1:2224657/1‑93 (MQ=255)
                                     ccAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGcc                                                    >  1:4174060/1‑93 (MQ=255)
                                     ccAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGcc                                                    >  2:2696945/1‑93 (MQ=255)
                                       aGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGcccc                                                  <  1:3053821/93‑1 (MQ=255)
                                        gAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCt                                                 >  2:4746274/1‑93 (MQ=255)
                                         aaCCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTg                                                >  2:1827337/1‑93 (MQ=255)
                                             aGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGc                                            >  2:3582282/1‑93 (MQ=255)
                                             aGACCACTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGc                                            <  1:1840604/93‑1 (MQ=255)
                                                ccGCTCAGTTTAGAGAGGTCCAGAGGGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGCACCGAGATCGATCTGGGGTCCTTGACGCAgg                                         >  2:3705064/1‑93 (MQ=255)
                                                 cGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAggg                                        >  2:925635/1‑93 (MQ=255)
                                                 cGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAggg                                        >  1:814146/1‑93 (MQ=255)
                                                 cGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAggg                                        >  1:423677/1‑93 (MQ=255)
                                                 cGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAggg                                        <  1:460871/93‑1 (MQ=255)
                                                  ccTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGgc                                       <  2:2538235/92‑1 (MQ=255)
                                                      aGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGt                                   >  2:148515/1‑93 (MQ=255)
                                                       gTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGCCGAAGGGCGCGTa                                  >  2:1313905/1‑93 (MQ=255)
                                                       gTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTa                                  >  1:3742211/1‑93 (MQ=255)
                                                        tttAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTaa                                 >  2:3184569/1‑93 (MQ=255)
                                                        tttAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTCCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTaa                                 >  2:1588606/1‑93 (MQ=255)
                                                         ttAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCGGGGCGCGTAAt                                >  1:543033/1‑93 (MQ=255)
                                                         ttAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAAt                                >  1:1287681/1‑93 (MQ=255)
                                                            gagagGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGc                             >  2:2596157/1‑93 (MQ=255)
                                                            gagagGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGc                             >  1:4738499/1‑93 (MQ=255)
                                                            gagagGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGc                             >  2:156277/1‑93 (MQ=255)
                                                             ggagGTCCAGAGTGCGACGTTGCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCACCTGATGCAGGGCGCGTAATTGCa                            <  2:204429/92‑1 (MQ=255)
                                                              gagGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCAc                           >  2:2288962/1‑93 (MQ=255)
                                                              gagGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCAc                           <  1:3534014/93‑1 (MQ=255)
                                                               agGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGACCCTGACGCAGGGCGCGTAATTGCACg                          >  2:1303030/1‑93 (MQ=255)
                                                                ggTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGt                         >  2:3809488/1‑93 (MQ=255)
                                                                ggTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGt                         >  2:200892/1‑93 (MQ=255)
                                                                 gTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTc                        >  1:3416383/1‑93 (MQ=255)
                                                                  tCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCa                       >  2:4439820/1‑93 (MQ=255)
                                                                  tCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCa                       >  2:744290/1‑93 (MQ=255)
                                                                   ccAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCAt                      >  1:466390/1‑93 (MQ=255)
                                                                    cAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATa                     >  2:3012747/1‑93 (MQ=255)
                                                                     agagTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATaa                    >  1:2153174/1‑93 (MQ=255)
                                                                     agagTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATaa                    <  1:2631986/93‑1 (MQ=255)
                                                                        gTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGc                 <  2:2486963/93‑1 (MQ=255)
                                                                        gTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGc                 <  1:4745793/93‑1 (MQ=255)
                                                                         tGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCt                <  1:4062964/93‑1 (MQ=255)
                                                                         tGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCt                <  1:3833061/93‑1 (MQ=255)
                                                                          gCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTg               <  1:2469988/93‑1 (MQ=255)
                                                                            cACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGgc             <  2:2659215/93‑1 (MQ=255)
                                                                             aCGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGgcc            >  1:4462652/1‑93 (MQ=255)
                                                                               gTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGgccgc          >  2:410961/1‑93 (MQ=255)
                                                                               gTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGgccgc          >  2:2327694/1‑93 (MQ=255)
                                                                                   cAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTa      <  1:2480261/93‑1 (MQ=255)
                                                                                     ggtggtTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGACCCTGACGCAGGGCGCGTAATTGAACGTCATAACGCTGGCCGCCGTACa    >  1:1896779/1‑93 (MQ=255)
                                                                                       tggtTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACaga  <  2:552244/93‑1 (MQ=255)
                                                                                       tggtTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACaga  <  1:4614091/93‑1 (MQ=255)
                                                                                           |                                                                                        
TCGATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTCCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACAGA  >  NC_000913/3304999‑3305178

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: