Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,316,615 T→C M113T (ATG→ACG)  argG → argininosuccinate synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,316,6150TC97.2% 555.1 / 2.7 180M113T (ATG→ACG) argGargininosuccinate synthetase
Reads supporting (aligned to +/- strand):  ref base T (2/3);  new base C (75/100);  total (77/103)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.62e-01

Only 100 of 182 total aligned reads displayed.

CCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTT  >  NC_000913/3316525‑3316704
                                                                                          |                                                                                         
ccGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGc                                                                                         <  1:2656117/93‑1 (MQ=255)
ccGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGc                                                                                         <  2:343967/93‑1 (MQ=255)
ccGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGc                                                                                         <  1:3211206/93‑1 (MQ=255)
  gCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTg                                                                                       <  1:2269155/93‑1 (MQ=255)
    tATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCATGCTGGt                                                                                     >  1:3929717/1‑93 (MQ=255)
    tATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGt                                                                                     <  1:4258067/93‑1 (MQ=255)
     aTTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGtt                                                                                    >  1:4073204/1‑93 (MQ=255)
     aTTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGtt                                                                                    >  1:592579/1‑93 (MQ=255)
     aTTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGtt                                                                                    >  1:4499933/1‑93 (MQ=255)
       tCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTtgc                                                                                  <  1:3367677/93‑1 (MQ=255)
        cAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTtgct                                                                                 <  2:1840575/93‑1 (MQ=255)
          gtgtGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTtgctgc                                                                               >  2:463845/1‑93 (MQ=255)
           tgtgGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCATGCTGGTTGCTGCg                                                                              <  2:3676944/93‑1 (MQ=255)
           tgtgGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCg                                                                              <  1:4301010/93‑1 (MQ=255)
           tgtgGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCg                                                                              >  2:4975/1‑93 (MQ=255)
            gtgGCGCATTTCATAACACCACCTGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGa                                                                             <  1:1888878/93‑1 (MQ=255)
            gtgGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGTCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGa                                                                             <  1:936700/93‑1 (MQ=255)
             tgGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGAt                                                                            <  1:737393/93‑1 (MQ=255)
             tgGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGAt                                                                            <  1:3373144/93‑1 (MQ=255)
              ggCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACACTGGTTGCTGCGATg                                                                           >  2:1675575/1‑93 (MQ=255)
               gcgcATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGa                                                                          >  2:273920/1‑93 (MQ=255)
                 gcATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGaaa                                                                        >  1:4721176/1‑93 (MQ=255)
                   aTTTCATAACACCGCCGGCGGCCTGGCCTATTTCAAGACGACGCCGCTGGTCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAaaga                                                                      <  1:3524056/93‑1 (MQ=255)
                   aTTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAaaga                                                                      <  1:2100966/93‑1 (MQ=255)
                    tttCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAaagaa                                                                     <  2:613513/93‑1 (MQ=255)
                     ttCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAaagaag                                                                    <  2:2160588/93‑1 (MQ=255)
                      tCATAACCCCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAagaaga                                                                   <  2:1894214/93‑1 (MQ=255)
                       taTAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGAt                                                                  <  1:1694817/92‑1 (MQ=255)
                       cATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGAt                                                                  <  1:2890525/93‑1 (MQ=255)
                        aTAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATg                                                                 <  2:4453208/93‑1 (MQ=255)
                         tAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGCCCGCGCCTTTACTGGCACCACCCTGGTTGCGGCGATGAAAGAAGATgg                                                                <  2:1626766/93‑1 (MQ=255)
                          aaCACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGc                                                               >  2:3256158/1‑93 (MQ=255)
                          aaCACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGc                                                               <  1:1051598/93‑1 (MQ=255)
                             accaccGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAGAGAAGATGGCGTg                                                            >  1:1576988/1‑93 (MQ=255)
                             accaccGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTg                                                            >  2:3490044/1‑93 (MQ=255)
                               caccGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGaa                                                          >  2:4059675/1‑93 (MQ=255)
                               caccGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGaa                                                          >  2:1873796/1‑93 (MQ=255)
                                accGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAat                                                         <  2:2080603/93‑1 (MQ=255)
                                accGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAat                                                         >  1:4171075/1‑93 (MQ=255)
                                 ccGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGACGTGACTGGTACCATGCTGGTTGCTGCGATGACAGAGGCTGGCGTGAata                                                        >  1:2062986/1‑93 (MQ=255)
                                   ggcggcCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTTCGATGAAAGAAGATGGCGTGAATATc                                                      <  2:82130/93‑1 (MQ=255)
                                   ggcggcCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATc                                                      <  1:2964534/93‑1 (MQ=255)
                                   ggcggcCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATc                                                      <  1:233064/93‑1 (MQ=255)
                                   ggcggcCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATc                                                      <  1:555047/93‑1 (MQ=255)
                                   ggcggcCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATc                                                      >  1:1310351/1‑93 (MQ=255)
                                    gaggcctggcctATTTCAACACGACGCCGCTGGGCGGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCt                                                     <  2:3724588/91‑1 (MQ=255)
                                       gcCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTggg                                                  >  2:3208354/1‑93 (MQ=255)
                                       gcCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTggg                                                  >  2:3472254/1‑93 (MQ=255)
                                        ccTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTgggg                                                 <  2:2892441/93‑1 (MQ=255)
                                        ccTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTgggg                                                 <  2:2892442/93‑1 (MQ=255)
                                        ccTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTgggg                                                 >  1:76668/1‑93 (MQ=255)
                                         cTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTCCCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGt                                                <  1:4360529/93‑1 (MQ=255)
                                         cTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTggggg                                                >  1:3586380/1‑92 (MQ=255)
                                          tGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTg                                               >  1:3129861/1‑93 (MQ=255)
                                          tGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTg                                               >  1:391360/1‑93 (MQ=255)
                                           gACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGa                                              >  1:4681335/1‑93 (MQ=255)
                                            aCCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGAc                                             <  2:2265656/93‑1 (MQ=255)
                                              cTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACgg                                           <  2:1155241/93‑1 (MQ=255)
                                              cTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACgg                                           <  2:3106956/93‑1 (MQ=255)
                                               tATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGt                                          >  1:1024106/1‑93 (MQ=255)
                                               tATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGt                                          >  1:416306/1‑93 (MQ=255)
                                                aTTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTa                                         >  1:218220/1‑93 (MQ=255)
                                                aTTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTa                                         >  1:2461634/1‑93 (MQ=255)
                                                 tttCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAg                                        >  1:3757557/1‑93 (MQ=255)
                                                   tCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCa                                      >  1:384908/1‑93 (MQ=255)
                                                     aaCACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCAcc                                    <  2:4131911/93‑1 (MQ=255)
                                                     aaCACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCAcc                                    >  2:2718339/1‑93 (MQ=255)
                                                      acacGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCt                                   >  2:3154753/1‑93 (MQ=255)
                                                      acacGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCt                                   >  1:1515594/1‑93 (MQ=255)
                                                       cacGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTa                                  >  1:2360816/1‑93 (MQ=255)
                                                        acgacgCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTAc                                 <  2:305584/93‑1 (MQ=255)
                                                               cgcTGGGCCGCGCCGTGACTGGTNCCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTCAATATCTGGGGTGACGGTAGCACCTACAAAGGaa                          <  1:2165486/93‑1 (MQ=255)
                                                               cgcTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGaa                          <  2:1713733/93‑1 (MQ=255)
                                                               cgcTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGaa                          <  2:3934979/93‑1 (MQ=255)
                                                                gcTGTGCCGCGCCGTGACTGGTACCATGCTGGTTGCGGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGaaa                         <  1:808889/93‑1 (MQ=255)
                                                                gcTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGaaa                         >  1:4567399/1‑93 (MQ=255)
                                                                 cTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAAc                        >  2:4551896/1‑93 (MQ=255)
                                                                   gggCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGa                      >  1:1216220/1‑93 (MQ=255)
                                                                    ggCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGat                     <  2:2769365/93‑1 (MQ=255)
                                                                    ggCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGat                     <  2:13593/93‑1 (MQ=255)
                                                                     gCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGata                    <  1:342730/93‑1 (MQ=255)
                                                                      ccGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGatat                   <  2:626967/93‑1 (MQ=255)
                                                                      ccGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGatat                   <  2:2105325/93‑1 (MQ=255)
                                                                       cgcgCCGTGACTGTTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATc                  <  1:139331/93‑1 (MQ=255)
                                                                       cgcgCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATc                  <  1:867799/93‑1 (MQ=255)
                                                                       cgcgCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATc                  <  1:2782048/93‑1 (MQ=255)
                                                                       cgcgCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATc                  <  2:2641546/93‑1 (MQ=255)
                                                                        gcgcCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCg                 >  2:1106137/1‑93 (MQ=255)
                                                                           ccGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAAc              <  1:11666/93‑1 (MQ=255)
                                                                           ccGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAAc              <  1:378923/93‑1 (MQ=255)
                                                                            cGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACg             <  2:4341366/93‑1 (MQ=255)
                                                                             gTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGt            >  2:103577/1‑93 (MQ=255)
                                                                             gTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGt            >  1:1001407/1‑93 (MQ=255)
                                                                             gTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGt            >  2:1217565/1‑93 (MQ=255)
                                                                              tGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGtt           <  2:173466/93‑1 (MQ=255)
                                                                                  tgatACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTa       <  1:2930494/90‑1 (MQ=255)
                                                                                  tGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTa       <  1:2930493/93‑1 (MQ=255)
                                                                                   ggTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAATGAAACGATATCGAACGTTTCTAt      >  2:2634809/1‑93 (MQ=255)
                                                                                    gTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTAtg     >  2:248738/1‑92 (MQ=255)
                                                                                    gTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATc     <  2:2462561/93‑1 (MQ=255)
                                                                                          |                                                                                         
CCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTT  >  NC_000913/3316525‑3316704

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: