Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,367,240 T→C Y249C (TAT→TGT)  yhcI ← putative NAGC‑like transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,367,2400TC98.8% 537.8 / ‑3.6 171Y249C (TAT→TGT) yhcIputative NAGC‑like transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base T (1/1);  new base C (77/92);  total (78/93)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.61e-01

Only 100 of 175 total aligned reads displayed.

AAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGATACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTA  >  NC_000913/3367150‑3367329
                                                                                          |                                                                                         
aaaCCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGacac                                                                                         >  2:708147/1‑93 (MQ=255)
 aaCCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACAcc                                                                                        >  1:3381888/1‑93 (MQ=255)
  aCCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACAccc                                                                                       <  2:3725839/93‑1 (MQ=255)
   ccTTCATCATGTCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCt                                                                                      <  1:2889334/93‑1 (MQ=255)
    cTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCtt                                                                                     <  2:4391864/93‑1 (MQ=255)
     tGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTc                                                                                    <  1:4319381/93‑1 (MQ=255)
     tGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTc                                                                                    <  2:633932/93‑1 (MQ=255)
      gCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCt                                                                                   <  1:3063701/93‑1 (MQ=255)
      gCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCt                                                                                   <  1:2686425/93‑1 (MQ=255)
       catcatGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTg                                                                                  >  1:248657/1‑93 (MQ=255)
        atcatGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGc                                                                                 >  1:4082903/1‑93 (MQ=255)
          catGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACCCCCTTCTGCCa                                                                               <  2:2827252/93‑1 (MQ=255)
            tGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGa                                                                             >  1:4580974/1‑93 (MQ=255)
              gCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGAcc                                                                           <  1:4445406/93‑1 (MQ=255)
               cGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCa                                                                          >  2:3729762/1‑93 (MQ=255)
                 gTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAAc                                                                        >  2:22380/1‑93 (MQ=255)
                 gTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAAc                                                                        <  2:1982359/93‑1 (MQ=255)
                   aaTGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGc                                                                      <  1:464590/93‑1 (MQ=255)
                    aTGCGCCACCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCt                                                                     <  2:1798655/93‑1 (MQ=255)
                     tGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGTCAGACACCCTTCTGCCATCCCTACGCTg                                                                    >  1:2256755/1‑93 (MQ=255)
                     tGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGAGCAACGCTg                                                                    >  1:1072/1‑93 (MQ=255)
                      gcgcCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGc                                                                   >  2:3442169/1‑93 (MQ=255)
                       cgccgcCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGcc                                                                  <  1:2075724/93‑1 (MQ=255)
                         ccgccAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCAc                                                                <  2:4143326/93‑1 (MQ=255)
                         ccgccAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCAc                                                                >  2:2027415/1‑93 (MQ=255)
                         ccgccAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCAc                                                                <  2:4342347/93‑1 (MQ=255)
                            ccAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGa                                                             >  2:4601762/1‑93 (MQ=255)
                            ccAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGa                                                             >  2:1890196/1‑93 (MQ=255)
                             cAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGac                                                            >  1:188428/1‑93 (MQ=255)
                              aGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGacc                                                           >  2:275049/1‑93 (MQ=255)
                               gTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGaccc                                                          >  2:3484378/1‑92 (MQ=255)
                               gTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGacca                                                          >  1:2171448/1‑93 (MQ=255)
                               gTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGacca                                                          >  2:1453621/1‑93 (MQ=255)
                               gTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGacca                                                          >  1:2268697/1‑93 (MQ=255)
                                tAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGaccac                                                         >  2:3630450/1‑93 (MQ=255)
                                tAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGaccac                                                         <  1:1727764/93‑1 (MQ=255)
                                  aaTCAACATGAAATGCCGCTGGCTCCTGCCCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCTACCGAccacca                                                       <  2:1880833/93‑1 (MQ=255)
                                  aaTCAACATGAAATGCCGCCGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGAccacca                                                       <  1:4030331/93‑1 (MQ=255)
                                      aaCATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCa                                                   <  1:911957/93‑1 (MQ=255)
                                      aaCATGAAATGCCGCTGGCTCCTGCACCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCa                                                   <  2:3312670/93‑1 (MQ=255)
                                       aCATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCAc                                                  >  2:889671/1‑93 (MQ=255)
                                       aCATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCAc                                                  <  2:3457991/93‑1 (MQ=255)
                                       aCATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCAc                                                  >  1:399719/1‑93 (MQ=255)
                                       aCATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCAc                                                  <  1:1895553/93‑1 (MQ=255)
                                        cATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACt                                                 <  1:184280/93‑1 (MQ=255)
                                         aTGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTg                                                <  2:2947414/93‑1 (MQ=255)
                                         aTGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTg                                                <  1:3784509/93‑1 (MQ=255)
                                         aTGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTg                                                >  2:798650/1‑93 (MQ=255)
                                          tGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTgg                                               >  1:331465/1‑93 (MQ=255)
                                          tGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTgg                                               >  1:107976/1‑93 (MQ=255)
                                          tGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTgg                                               >  1:67449/1‑93 (MQ=255)
                                           gAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGc                                              >  2:1253966/1‑93 (MQ=255)
                                            aaaTCCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCa                                             <  2:4481354/93‑1 (MQ=255)
                                               tGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATc                                          <  1:1481936/93‑1 (MQ=255)
                                               tGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATc                                          >  2:1722244/1‑93 (MQ=255)
                                               tGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATc                                          <  1:4229875/93‑1 (MQ=255)
                                               tGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATc                                          >  1:1542628/1‑93 (MQ=255)
                                                gCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCa                                         >  1:1233048/1‑93 (MQ=255)
                                                gCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCa                                         >  2:619818/1‑93 (MQ=255)
                                                 ccGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAg                                        <  1:3920615/93‑1 (MQ=255)
                                                 ccGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAg                                        <  2:2856897/93‑1 (MQ=255)
                                                 ccGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAg                                        <  2:646946/93‑1 (MQ=255)
                                                  cGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGt                                       >  1:571327/1‑93 (MQ=255)
                                                  cGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGt                                       <  1:2209950/93‑1 (MQ=255)
                                                  cGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGt                                       <  2:4300743/93‑1 (MQ=255)
                                                   gCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGtt                                      <  1:2967591/93‑1 (MQ=255)
                                                   gCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGtt                                      <  1:3570651/93‑1 (MQ=255)
                                                    cTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTtg                                     <  1:1514515/93‑1 (MQ=255)
                                                    cTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTtg                                     >  1:3577749/1‑93 (MQ=255)
                                                      ggCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTtgtg                                   <  2:953118/93‑1 (MQ=255)
                                                        cTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGc                                 >  1:3633522/1‑93 (MQ=255)
                                                         tCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCt                                >  2:828914/1‑93 (MQ=255)
                                                          ccTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCtt                               >  1:1502545/1‑93 (MQ=255)
                                                          ccTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCtt                               >  1:3030438/1‑93 (MQ=255)
                                                           cTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCttt                              >  2:1876872/1‑93 (MQ=255)
                                                            tGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTa                             >  1:1166286/1‑93 (MQ=255)
                                                             gcgcCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTaa                            >  2:1175246/1‑93 (MQ=255)
                                                               gcCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAata                          <  2:170957/93‑1 (MQ=255)
                                                               gcCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAata                          >  2:2243762/1‑93 (MQ=255)
                                                               gcCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAata                          >  1:2963457/1‑93 (MQ=255)
                                                               gcCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGACACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAata                          <  1:1765321/93‑1 (MQ=255)
                                                                 cAGATACGTTTCCCCCAGCGCCAGACACCCTTCGGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATc                        <  2:3156869/93‑1 (MQ=255)
                                                                  aGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAGCGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCa                       <  1:4535978/93‑1 (MQ=255)
                                                                  aGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCa                       >  1:4001227/1‑93 (MQ=255)
                                                                   gATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAg                      >  2:4547707/1‑93 (MQ=255)
                                                                    aTACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGc                     <  2:2709797/93‑1 (MQ=255)
                                                                     tACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCg                    >  2:3357685/1‑93 (MQ=255)
                                                                     tACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCg                    >  2:1558220/1‑93 (MQ=255)
                                                                      aCGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGa                   >  1:3418388/1‑93 (MQ=255)
                                                                      aCGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGa                   >  2:2335675/1‑93 (MQ=255)
                                                                         tttCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCa                <  1:2924284/93‑1 (MQ=255)
                                                                         tttCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCa                >  2:854493/1‑93 (MQ=255)
                                                                          ttCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAg               <  1:2681600/93‑1 (MQ=255)
                                                                          tgccaccaGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAg               <  1:2400580/91‑1 (MQ=255)
                                                                           tCCACCAGCGCCATACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGc              <  1:721929/93‑1 (MQ=255)
                                                                           tCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGc              <  2:3964624/93‑1 (MQ=255)
                                                                             caccaGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCt            <  1:3322973/93‑1 (MQ=255)
                                                                                caGCGCCAGATACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGc         >  1:3807770/1‑93 (MQ=255)
                                                                                   cgcCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAg      <  2:549954/93‑1 (MQ=255)
                                                                                       aGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTa  <  2:1842892/93‑1 (MQ=255)
                                                                                          |                                                                                         
AAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGATACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTA  >  NC_000913/3367150‑3367329

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: