BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,418,628	A→G	A286A (GCA→GCG)	b3269 →	putative transport system permease protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,418,628	0	A	G	100.0%	472.5 / NA	147	A286A (GCA→GCG)	b3269	putative transport system permease protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (81/66); total (81/66)

Only 100 of 149 total aligned reads displayed.

TTTAATTCCTGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCAGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAGGCATTGCG  >  NC_000913/3418538‑3418717

tttAATTCCTGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGt                                                                                         >  2:3272246/1‑93 (MQ=255)

tttAATTCCTGAACTGGCAGCCTTAACGCTGGCACTTTCGGCTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGt                                                                                         >  1:575873/1‑93 (MQ=255)

 ttAATTCCTGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTg                                                                                        <  1:3778995/93‑1 (MQ=255)

 ttAATTCCTGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTg                                                                                        >  1:2507016/1‑93 (MQ=255)

    aTTCCTGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCt                                                                                     >  2:1921158/1‑93 (MQ=255)

    aTTCCTGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCt                                                                                     <  2:1155625/93‑1 (MQ=255)

    aTTCCTGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCt                                                                                     <  1:2943182/93‑1 (MQ=255)

      tCCTGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTa                                                                                   >  2:4519676/1‑93 (MQ=255)

      tCCTGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTa                                                                                   <  1:4668905/93‑1 (MQ=255)

      tCCTGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTa                                                                                   <  1:4668904/93‑1 (MQ=255)

      tCCTGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTa                                                                                   >  1:2532032/1‑93 (MQ=255)

        cTGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATg                                                                                 >  1:4519931/1‑93 (MQ=255)

         tGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATgg                                                                                >  2:3620979/1‑93 (MQ=255)

         tGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATgg                                                                                >  2:157079/1‑93 (MQ=255)

         tGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATgg                                                                                >  1:91120/1‑93 (MQ=255)

         tGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATgg                                                                                >  1:2161438/1‑93 (MQ=255)

             cTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCaa                                                                            <  2:1454144/93‑1 (MQ=255)

             cTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCaa                                                                            >  2:527261/1‑93 (MQ=255)

              tGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAAc                                                                           <  1:3189673/93‑1 (MQ=255)

                  aGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGa                                                                       >  1:3044720/1‑93 (MQ=255)

                   gCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGaa                                                                      >  1:2165347/1‑93 (MQ=255)

                    ctttATCGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAg                                                                     <  2:3790566/91‑1 (MQ=255)

                    ccTTAACGCTGGCATGTTCGTTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCTTTATGGTCAACATGAAg                                                                     <  2:4063646/93‑1 (MQ=255)

                    ccTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAg                                                                     <  1:2180733/93‑1 (MQ=255)

                    ccTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAg                                                                     >  2:2896504/1‑93 (MQ=255)

                    ccTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAg                                                                     <  2:4063645/93‑1 (MQ=255)

                    ccTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAg                                                                     >  1:3219989/1‑93 (MQ=255)

                      ttAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCg                                                                   >  2:2303479/1‑93 (MQ=255)

                      ttAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCg                                                                   >  2:2303478/1‑93 (MQ=255)

                        aaCGCTGGCACTTTCGGTTTATAGATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGc                                                                 <  2:2589608/93‑1 (MQ=255)

                        aaCGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGc                                                                 <  2:367302/93‑1 (MQ=255)

                         aCGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCt                                                                >  2:1205530/1‑93 (MQ=255)

                         aCGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCt                                                                >  2:2555429/1‑93 (MQ=255)

                         aCGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTAGGGTCAACATGAAGCgccg                                                                >  2:3811925/1‑90 (MQ=255)

                          cGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTc                                                               >  1:2329504/1‑93 (MQ=255)

                          cGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTc                                                               <  1:2327868/93‑1 (MQ=255)

                           gCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCg                                                              >  1:3316131/1‑93 (MQ=255)

                           gCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCg                                                              >  1:2068908/1‑93 (MQ=255)

                           gCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCg                                                              >  1:538721/1‑93 (MQ=255)

                             tGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGt                                                            <  1:2273451/93‑1 (MQ=255)

                                cACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCAc                                                         <  2:868902/93‑1 (MQ=255)

                                 aCTTTCGGTGTATACATCTGCACTAATCGCCGAGATTATCCGCGCTGGGACCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACt                                                        <  2:1264364/93‑1 (MQ=255)

                                  cTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTg                                                       <  1:993157/93‑1 (MQ=255)

                                   tttCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCAGTgg                                                      >  2:4454396/1‑93 (MQ=255)

                                   tttCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACtcg                                                      >  1:3742619/1‑91 (MQ=255)

                                   tttCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTgg                                                      >  1:1984147/1‑93 (MQ=255)

                                   tgtCGGTTTATAGATCTGCATTTATCGCCAAGATTATCCGCGCTGGGATCCAGCCGGTGCGTTATGGTCAACATGAAGCGGCTCGGTCACTgg                                                      <  2:1186860/91‑1 (MQ=255)

                                     tCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGa                                                    <  1:1656856/93‑1 (MQ=255)

                                        gTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTAGGTCACTGGGATTa                                                 >  1:3534759/1‑93 (MQ=255)

                                         tttATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTAc                                                >  1:761467/1‑93 (MQ=255)

                                         tttATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTAc                                                >  2:560483/1‑93 (MQ=255)

                                           tataCATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTAccc                                              >  1:3023509/1‑93 (MQ=255)

                                            gtaCATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGGCACTGGGATTACCCa                                             >  2:2879954/2‑93 (MQ=255)

                                            ataCATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCa                                             >  2:2181763/1‑93 (MQ=255)

                                               cATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAAcc                                          >  1:1749426/1‑93 (MQ=255)

                                                aTCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAAccc                                         <  1:4347056/93‑1 (MQ=255)

                                                  cttcATTTATCGCCGAGATTATCCGCGCTGGGTGCCAGGCGGTACCTTATGGTCATCATGAAGCGGCTTGGTCACTGGGATTGCCCAACCCgg                                       <  2:3348189/90‑1 (MQ=255)

                                                   tGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGt                                      >  1:4144378/1‑93 (MQ=255)

                                                    gCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCCACCCGGtt                                     >  2:1938553/1‑93 (MQ=255)

                                                     cATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTta                                    <  2:434679/93‑1 (MQ=255)

                                                      aTTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTtac                                   >  1:4391055/1‑93 (MQ=255)

                                                      aTTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTtac                                   >  1:3219891/1‑93 (MQ=255)

                                                       tttATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTtacg                                  <  1:3407388/93‑1 (MQ=255)

                                                        ttATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCATCCCGGTtacgc                                 <  2:1749198/93‑1 (MQ=255)

                                                         tATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTtacgct                                >  2:389146/1‑93 (MQ=255)

                                                         tATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTtacgct                                >  1:1089845/1‑93 (MQ=255)

                                                          aTCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTttcgcta                               >  2:2142597/1‑93 (MQ=255)

                                                          aTCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGGCACTGGGATTACCCCACCCGGGtacgcta                               >  2:490443/1‑93 (MQ=255)

                                                          aTCGCCGAGATTATCCGCGCTGGGAACCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTtacgcta                               <  2:1219287/93‑1 (MQ=255)

                                                          aTCGCCGAGATTATCCGCGCTGGCATCCAGGCGGTGCCTTATTGTTAACATGAAGCGGCTCGGTCACGGGGATTTCCCAACTCGGTtacggta                               <  2:1219288/93‑1 (MQ=255)

                                                             gCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTtacgctacgc                            >  1:4464075/1‑93 (MQ=255)

                                                              ccGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGcc                           <  2:1555924/93‑1 (MQ=255)

                                                                gagaTTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAg                         <  1:2046093/93‑1 (MQ=255)

                                                                 agaTTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAgg                        <  1:2584089/93‑1 (MQ=255)

                                                                   aTTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGTCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTc                      <  2:2714926/93‑1 (MQ=255)

                                                                   aTTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTc                      <  2:2714927/93‑1 (MQ=255)

                                                                      aTCCGCGCTGGGATCCCGGCGGTGCCTTATGGTCAACATGCAGCGGCTCGGTCACTGGGATTACCCCACCCGGTTACGCTCCGCCCGGTCatt                   >  1:1896797/1‑93 (MQ=255)

                                                                      aTCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGGCatt                   >  1:2015265/1‑93 (MQ=255)

                                                                        ccGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCCACCCGGTTACGCTACGCCAGGTCattat                 >  1:1774177/1‑93 (MQ=255)

                                                                          gcgcTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTc               <  2:3785128/93‑1 (MQ=255)

                                                                           cgcTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTcc              >  1:1295807/1‑93 (MQ=255)

                                                                            gcTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTccc             >  1:1862667/1‑93 (MQ=255)

                                                                            gcTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTccc             <  2:16315/93‑1 (MQ=255)

                                                                             cTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTcccc            <  1:3985439/93‑1 (MQ=255)

                                                                              tGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCa           >  2:2108002/1‑93 (MQ=255)

                                                                              tGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCa           <  1:2597159/93‑1 (MQ=255)

                                                                               gggATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAg          >  2:732317/1‑93 (MQ=255)

                                                                               gggATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAg          <  2:1821942/93‑1 (MQ=255)

                                                                               gggATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAg          <  2:1370258/93‑1 (MQ=255)

                                                                                 gATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAGGc        <  2:1654781/93‑1 (MQ=255)

                                                                                  aTCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAGGCa       <  2:1225934/93‑1 (MQ=255)

                                                                                   tCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAGGCAt      >  1:3172202/1‑93 (MQ=255)

                                                                                   tCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAGGCAt      >  1:705146/1‑93 (MQ=255)

                                                                                    ccAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAGGCAtt     <  2:3129377/93‑1 (MQ=255)

                                                                                    ccAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAGGCAtt     <  2:2089866/93‑1 (MQ=255)

                                                                                    ccAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGGTACGCTACGCCAGGTCATTATTCCCCAGGCAtt     >  2:4419180/1‑93 (MQ=255)

                                                                                     cAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAGGCATTg    <  2:4257031/93‑1 (MQ=255)

                                                                                     cAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAGGCATTg    <  2:4167668/93‑1 (MQ=255)

                                                                                     cAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAGGCATTg    <  2:960836/93‑1 (MQ=255)

                                                                                      aGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGGTTACCCAACCCGGTTACGCTACGCCAGGTCCTTATTCCCCAGGCCTTGc   >  2:3135834/1‑93 (MQ=255)

TTTAATTCCTGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCAGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAGGCATTGCG  >  NC_000913/3418538‑3418717

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`