BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,568,434	A→G	R173R (CGT→CGC)	glgX ←	GlgX

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,568,434	0	A	G	97.6%	381.7 / ‑0.2	124	R173R (CGT→CGC)	glgX	GlgX
Reads supporting (aligned to +/- strand): ref base A (1/2); new base G (60/61); total (61/63)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.78e-01

Only 100 of 129 total aligned reads displayed.

CTGCGCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGG  >  NC_000913/3568344‑3568523

cTGCGCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCcgcg                                                                                         >  1:4432536/1‑93 (MQ=255)

  gcgcCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGa                                                                                       <  1:4300704/93‑1 (MQ=255)

  gcgcCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGa                                                                                       <  1:3809616/93‑1 (MQ=255)

   cgcCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGAt                                                                                      <  2:1410628/93‑1 (MQ=255)

   cgcCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGAt                                                                                      <  1:4094276/93‑1 (MQ=255)

    gcCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGAtc                                                                                     <  2:2756873/93‑1 (MQ=255)

    gcCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGAtc                                                                                     >  1:2578313/1‑93 (MQ=255)

     ccACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGAtct                                                                                    >  2:4063373/1‑93 (MQ=255)

     ccACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGAtct                                                                                    >  2:1848717/1‑93 (MQ=255)

      cACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGAtctc                                                                                   <  1:1083360/93‑1 (MQ=255)

      cACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGAtctc                                                                                   <  1:2753997/93‑1 (MQ=255)

      cACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGAtctc                                                                                   <  1:2167780/93‑1 (MQ=255)

        cTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGa                                                                                 <  1:1218812/93‑1 (MQ=255)

        cTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGa                                                                                 <  2:4044644/93‑1 (MQ=255)

         tGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGAc                                                                                >  1:4282165/1‑93 (MQ=255)

         tGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGAc                                                                                <  1:4556028/93‑1 (MQ=255)

         tGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGAc                                                                                <  1:656045/93‑1 (MQ=255)

         tGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGAc                                                                                <  1:1611177/93‑1 (MQ=255)

         tGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGAc                                                                                <  2:1283748/93‑1 (MQ=255)

          ggCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGAcc                                                                               >  2:1754466/1‑93 (MQ=255)

           gcagcaGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCg                                                                              <  1:81507/93‑1 (MQ=255)

            cagcagTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCgg                                                                             <  1:2455344/93‑1 (MQ=255)

              gcagTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGa                                                                           >  2:1373582/1‑93 (MQ=255)

                agTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGAtc                                                                         <  2:3108513/93‑1 (MQ=255)

                  ttCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGAtctc                                                                       >  1:4000319/1‑93 (MQ=255)

                  ttCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGAtctc                                                                       >  1:840129/1‑93 (MQ=255)

                  ttCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGAtctc                                                                       >  1:1247334/1‑93 (MQ=255)

                  ttCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGAtctc                                                                       >  2:3524630/1‑93 (MQ=255)

                      aGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCggg                                                                   <  2:4568205/93‑1 (MQ=255)

                       gcgcGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCgggg                                                                  >  1:183406/1‑92 (MQ=255)

                         gcgGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGc                                                                <  2:3118456/93‑1 (MQ=255)

                         gcgGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGc                                                                >  1:1402631/1‑93 (MQ=255)

                         gcgGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGc                                                                >  2:3427558/1‑93 (MQ=255)

                           ggTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCaa                                                              <  2:842142/93‑1 (MQ=255)

                            gTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAg                                                             >  2:1189811/1‑93 (MQ=255)

                             tAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGt                                                            >  1:2769871/1‑93 (MQ=255)

                              aaTGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTa                                                           <  1:1437801/93‑1 (MQ=255)

                               aTGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTAc                                                          >  2:4611284/1‑93 (MQ=255)

                                tGCCAAATTGTTTCAATTATTTGATCATACCCGGATGCCCGAGGGC‑TTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGt                                                        <  2:1050151/93‑1 (MQ=255)

                                 gCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGt                                                        <  1:1512981/93‑1 (MQ=255)

                                 gCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGt                                                        <  2:1050152/93‑1 (MQ=255)

                                 gCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGt                                                        <  1:3585145/93‑1 (MQ=255)

                                  cccAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGtt                                                       <  1:1747053/93‑1 (MQ=255)

                                   ccAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTa                                                      >  2:917921/1‑93 (MQ=255)

                                     aaTTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAAt                                                    >  2:4453710/1‑93 (MQ=255)

                                     aaTTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAAt                                                    >  2:1330757/1‑93 (MQ=255)

                                        tGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCt                                                 <  1:3331/93‑1 (MQ=255)

                                         gTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCtt                                                <  1:2959850/93‑1 (MQ=255)

                                          tttCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCttt                                               <  2:4439176/93‑1 (MQ=255)

                                            tCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGa                                             <  1:3134872/93‑1 (MQ=255)

                                             cAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGAc                                            >  2:3010902/1‑93 (MQ=255)

                                             cAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGAc                                            >  2:739825/1‑93 (MQ=255)

                                             cAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGAc                                            >  2:2442944/1‑93 (MQ=255)

                                              aaaTAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACa                                           >  1:2213769/1‑93 (MQ=255)

                                              aaaTAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACa                                           >  2:4183627/1‑93 (MQ=255)

                                                aTAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATg                                         <  1:3425280/93‑1 (MQ=255)

                                                    ttGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCt                                     <  2:2061264/93‑1 (MQ=255)

                                                      gATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTc                                   <  2:1859568/93‑1 (MQ=255)

                                                      gATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTc                                   <  2:3488359/93‑1 (MQ=255)

                                                       atcatcACCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCa                                  >  2:170946/1‑93 (MQ=255)

                                                        tcatcaCCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCAt                                 >  1:191913/1‑93 (MQ=255)

                                                        tcatcaCCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCAt                                 >  2:4589064/1‑93 (MQ=255)

                                                         catcaCCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATa                                <  2:4289034/93‑1 (MQ=255)

                                                         catcaCCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATa                                <  2:1456695/93‑1 (MQ=255)

                                                           tcaCCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATaaa                              >  1:1563697/1‑93 (MQ=255)

                                                           tcaCCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATaaa                              <  1:765452/93‑1 (MQ=255)

                                                           tcaCCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATaaa                              >  1:3344981/1‑93 (MQ=255)

                                                           tcaCCGGATGCCCGAGGGCTTTATAAGGGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATaaa                              <  1:587294/93‑1 (MQ=255)

                                                            caCCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAat                             <  2:4432536/93‑1 (MQ=255)

                                                             aCCGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAatg                            >  2:1723201/1‑93 (MQ=255)

                                                              ccGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAatga                           >  2:2242650/1‑93 (MQ=255)

                                                              ccGGATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAatga                           <  2:2528904/93‑1 (MQ=255)

                                                                ggATGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAatgatg                         >  2:806093/1‑93 (MQ=255)

                                                                ggATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAatgatg                         >  1:1557555/1‑93 (MQ=255)

                                                                ggATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAatgatg                         <  1:4139842/93‑1 (MQ=255)

                                                                 gATGCCCGAGGGCTTTATAAGTGACGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATgg                        <  1:1124465/93‑1 (MQ=255)

                                                                   tGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATAGGCTTCATAAATGATGGtg                      >  2:23745/1‑93 (MQ=255)

                                                                   tGCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTACGGGTGCAAGTACGTTAATCCTTTGACACGGGCTTCATAAATGATGGtg                      >  1:3260672/1‑93 (MQ=255)

                                                                    gCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGtgc                     <  1:3745868/93‑1 (MQ=255)

                                                                    gCCCGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGtgc                     <  1:4508868/93‑1 (MQ=255)

                                                                     cccGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGtgct                    >  2:3176716/1‑93 (MQ=255)

                                                                     cccGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGtgct                    <  2:2832542/93‑1 (MQ=255)

                                                                      ccGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGtgctg                   >  2:3961229/1‑93 (MQ=255)

                                                                       cGAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGtgctgc                  >  2:543479/1‑93 (MQ=255)

                                                                        gAGGGCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGcc                 >  2:3325263/1‑93 (MQ=255)

                                                                        gAGGGCTCGAGAAGTGCCGCGGATCTCGACCGGGATCGCCGGGCGCAAGTACGGGAATCCTTTGACATGGGCTTCACAAATGATGGTGCTGcc                 >  2:4205211/1‑93 (MQ=255)

                                                                         aGGGCTTTATAAGTGCCGCGGGTCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGccc                <  2:1221917/93‑1 (MQ=255)

                                                                          gggCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGaccc               >  1:962763/1‑93 (MQ=255)

                                                                            gCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCAc             >  2:4244129/1‑93 (MQ=255)

                                                                            gCTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCAc             >  1:295428/1‑93 (MQ=255)

                                                                             cTTTATAAGTGCCGCGGATCTCGACCGGGATCTCCGGTTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACg            <  2:2975421/93‑1 (MQ=255)

                                                                             cTTGATAAGTGGCGGGGATGTCGACCGGGATCTCCGCGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCAACg            <  1:4254376/93‑1 (MQ=255)

                                                                              tttATAAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACgg           <  2:1945807/93‑1 (MQ=255)

                                                                                tataAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCg         <  1:2948685/93‑1 (MQ=255)

                                                                                tataAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCg         <  1:1304322/93‑1 (MQ=255)

                                                                                  taAGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTg       <  1:2177300/93‑1 (MQ=255)

                                                                                   aaGTGCGGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGCCGTgc      >  2:2270567/1‑93 (MQ=255)

                                                                                    aGTGCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTgcg     >  2:4518319/1‑93 (MQ=255)

                                                                                       gCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCgcgg  <  2:1971741/93‑1 (MQ=255)

                                                                                       gCCGCGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCgcgg  >  2:517435/1‑93 (MQ=255)

CTGCGCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGG  >  NC_000913/3568344‑3568523

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`