Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,586,561 T→C N97S (AAC→AGC)  ugpC ← ATP‑binding component of sn‑glycerol 3‑phosphate transport system

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,586,5610TC98.5% 639.9 / ‑1.7 204N97S (AAC→AGC) ugpCATP‑binding component of sn‑glycerol 3‑phosphate transport system
Reads supporting (aligned to +/- strand):  ref base T (2/1);  new base C (95/106);  total (97/107)
Fisher's exact test for biased strand distribution p-value = 6.05e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01

Only 100 of 213 total aligned reads displayed.

CGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGTTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCG  >  NC_000913/3586471‑3586649
                                                                                          |                                                                                        
cgcTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTc                                                                                        <  2:24377/93‑1 (MQ=255)
cgcTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTc                                                                                        >  1:2233645/1‑93 (MQ=255)
 gcTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGctct                                                                                       <  1:3690505/93‑1 (MQ=255)
 gcTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGctct                                                                                       >  1:2088358/1‑93 (MQ=255)
   tCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTgg                                                                                     <  2:697026/93‑1 (MQ=255)
   tCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTgg                                                                                     <  1:2163652/93‑1 (MQ=255)
        aaTTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAacac                                                                                >  1:2548188/1‑93 (MQ=255)
         aTTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACAcc                                                                               >  2:572196/1‑93 (MQ=255)
          tttGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCa                                                                              >  1:1126437/1‑93 (MQ=255)
          tttGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCa                                                                              <  1:1312280/93‑1 (MQ=255)
          tttGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCa                                                                              >  1:2626042/1‑93 (MQ=255)
           ttGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCAt                                                                             >  2:1217836/1‑93 (MQ=255)
           ttGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCAt                                                                             <  1:2056460/93‑1 (MQ=255)
            tgctgcTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATc                                                                            <  2:2776117/93‑1 (MQ=255)
            tgctgcTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATc                                                                            <  2:1445687/93‑1 (MQ=255)
            tgctgcTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATc                                                                            <  2:1884648/93‑1 (MQ=255)
            tgctgcTTGCCCAGGCCGCGAATTTTCATCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATc                                                                            <  2:214049/93‑1 (MQ=255)
              ctgctTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGc                                                                          <  2:135607/93‑1 (MQ=255)
              ctgctCGCCCATGCCGCGAATTTTCAGCCATCACGCTATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACCCCATCGc                                                                          <  2:2254478/93‑1 (MQ=255)
               tgctTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCa                                                                         >  2:672489/1‑93 (MQ=255)
                   tGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATcc                                                                     <  2:116889/93‑1 (MQ=255)
                   tGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATcc                                                                     >  1:4036416/1‑93 (MQ=255)
                      ccATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCcgc                                                                  >  2:1132982/1‑93 (MQ=255)
                        aTGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGa                                                                <  2:3603479/93‑1 (MQ=255)
                        aTGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGa                                                                <  1:2911640/93‑1 (MQ=255)
                        aTGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGa                                                                >  1:3721865/1‑93 (MQ=255)
                         tGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGAt                                                               <  1:1892786/93‑1 (MQ=255)
                           ccGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCt                                                             <  2:156979/93‑1 (MQ=255)
                            cgcgAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCtt                                                            >  1:1462703/1‑93 (MQ=255)
                             gcgAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCttt                                                           >  2:4269393/1‑93 (MQ=255)
                             gcgAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCttt                                                           >  1:701634/1‑93 (MQ=255)
                             gccaaTTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCttt                                                           <  1:958235/90‑1 (MQ=255)
                              cgAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTCGCTCTGGAACACCATCGCAATCCCGCGATCtttt                                                          >  1:4681418/1‑93 (MQ=255)
                              cgAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCtttt                                                          >  1:4112831/1‑93 (MQ=255)
                               gAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTATGGAACACCATCGCAATCCCGCGATCTTTTg                                                         >  1:4088333/1‑93 (MQ=255)
                                 aTTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGc                                                       <  2:3445607/93‑1 (MQ=255)
                                   tttCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGTAACACCATCGCAATCCCGCGATCTTTTGGCTc                                                     >  1:1915626/1‑93 (MQ=255)
                                   tttCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTc                                                     <  2:458635/93‑1 (MQ=255)
                                    ttCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTcc                                                    <  2:4071987/93‑1 (MQ=255)
                                         cccccACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTc                                               <  1:3464770/93‑1 (MQ=255)
                                         cccccACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTc                                               <  2:2866340/93‑1 (MQ=255)
                                          ccccACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCa                                              <  2:199304/93‑1 (MQ=255)
                                            ccACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCTGCGATCTTTTGGCTCCATTTCAGt                                            >  2:523592/1‑93 (MQ=255)
                                             cACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTc                                           <  1:4253945/93‑1 (MQ=255)
                                              aCGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCa                                          >  1:4291308/1‑93 (MQ=255)
                                                gCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCAcg                                        <  1:4436312/93‑1 (MQ=255)
                                                 ccATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCAcgc                                       <  1:517051/93‑1 (MQ=255)
                                                 ccATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCAcgc                                       <  1:1224794/93‑1 (MQ=255)
                                                 ccATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCAcgc                                       <  2:3692566/93‑1 (MQ=255)
                                                 ccATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCAcgc                                       >  1:915901/1‑93 (MQ=255)
                                                  cctGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCAcgcg                                      >  2:4547376/3‑93 (MQ=255)
                                                  cATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCAcgcg                                      >  1:880870/1‑93 (MQ=255)
                                                  cATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCAcgcg                                      >  2:2516571/1‑93 (MQ=255)
                                                   aTGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACgcgc                                     <  2:105310/93‑1 (MQ=255)
                                                   aTGTTGTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACgcgc                                     <  1:2411029/93‑1 (MQ=255)
                                                    tGTTTTCTTTGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCt                                    >  1:1371997/1‑93 (MQ=255)
                                                    tGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTTGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCt                                    <  1:3969132/93‑1 (MQ=255)
                                                    tGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCt                                    <  1:1327967/93‑1 (MQ=255)
                                                    tGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCt                                    >  2:3300738/1‑93 (MQ=255)
                                                       tttCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGt                                 >  2:34015/1‑93 (MQ=255)
                                                       tttCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGt                                 <  1:310507/93‑1 (MQ=255)
                                                       tttCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGt                                 <  1:830708/93‑1 (MQ=255)
                                                        ttcttcGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTc                                <  1:3014667/93‑1 (MQ=255)
                                                         tcttcGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCg                               >  2:4708236/1‑93 (MQ=255)
                                                          cttcGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAGCACCATCGCAAGCCCGCGACCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGt                              <  2:2967358/93‑1 (MQ=255)
                                                           ttcGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCgcg                             >  2:3375906/1‑91 (MQ=255)
                                                           ttcGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGtt                             <  1:3302548/93‑1 (MQ=255)
                                                             cGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGa                           <  2:3037170/93‑1 (MQ=255)
                                                                cacTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCATTCACGCGCTGGTCGTTGATcc                        <  2:3246173/93‑1 (MQ=255)
                                                                cacTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATcc                        >  2:2679491/1‑93 (MQ=255)
                                                                 acTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCa                       >  2:4233420/1‑93 (MQ=255)
                                                                 acTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCa                       >  2:3874581/1‑93 (MQ=255)
                                                                  cTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAg                      >  2:304346/1‑93 (MQ=255)
                                                                   tCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGa                     >  1:1023482/1‑93 (MQ=255)
                                                                   tCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGa                     <  2:1631830/93‑1 (MQ=255)
                                                                    cATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGat                    <  2:2037452/93‑1 (MQ=255)
                                                                     atatGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGata                   <  1:2520196/93‑1 (MQ=255)
                                                                     atatGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGata                   <  1:224938/93‑1 (MQ=255)
                                                                      tatGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGatat                  >  2:2916646/1‑93 (MQ=255)
                                                                      tatGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGatat                  <  1:3810170/93‑1 (MQ=255)
                                                                       ttacGGATAAAGCGCGGAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATc                 <  1:298732/90‑1 (MQ=255)
                                                                        tGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCg                >  2:443684/1‑93 (MQ=255)
                                                                         gCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGc               >  1:1243976/1‑93 (MQ=255)
                                                                          cGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGcc              <  2:4497469/93‑1 (MQ=255)
                                                                           ggATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCt             <  1:2749475/93‑1 (MQ=255)
                                                                            gATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCtc            >  1:3859875/1‑92 (MQ=255)
                                                                             aTAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTc           <  2:726727/93‑1 (MQ=255)
                                                                             aTAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTAGTTGATCCAGATATCGCCTTc           <  1:834958/93‑1 (MQ=255)
                                                                              tAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATGCAGAGATCGCCTTCt          >  1:4143739/1‑93 (MQ=255)
                                                                              tAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCt          <  1:1741059/93‑1 (MQ=255)
                                                                              tAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCt          <  1:2835168/93‑1 (MQ=255)
                                                                                 aGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTc       <  2:446816/93‑1 (MQ=255)
                                                                                 aGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTc       <  2:2163576/93‑1 (MQ=255)
                                                                                  gcgcGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCa      <  1:3384722/93‑1 (MQ=255)
                                                                                   cgcgTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCAc     <  1:1930471/93‑1 (MQ=255)
                                                                                    gcgTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCAcc    >  2:3706278/1‑93 (MQ=255)
                                                                                    gcgTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCAcc    >  1:2474167/1‑93 (MQ=255)
                                                                                    gcgTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCAcc    >  2:2073229/1‑93 (MQ=255)
                                                                                    gcgTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCAcc    <  1:222437/93‑1 (MQ=255)
                                                                                      gTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCg  <  1:4373834/93‑1 (MQ=255)
                                                                                          |                                                                                        
CGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGTTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCG  >  NC_000913/3586471‑3586649

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: