BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	439,695	A→G	Y211H (TAT→CAT)	ispA ←	geranyltranstransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	439,695	0	A	G	97.8%	442.5 / ‑2.9	139	Y211H (TAT→CAT)	ispA	geranyltranstransferase
Reads supporting (aligned to +/- strand): ref base A (2/1); new base G (86/50); total (88/51)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 142 total aligned reads displayed.

CACCCTGGCGTTTTCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATACTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCAATGCGCCGGTTT  >  NC_000913/439605‑439784

cACCCTGGCGTTTTCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCt                                                                                         <  2:2811271/93‑1 (MQ=255)

 aCCCTGGCGTTTTCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCtt                                                                                        >  2:4282589/1‑93 (MQ=255)

 aCCCTGGCGTTTTCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCtt                                                                                        >  2:3148363/1‑93 (MQ=255)

  cccTGGCGTTTTCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTg                                                                                       >  2:1671300/1‑93 (MQ=255)

   ccTGGCGTTTTCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAATGCCGATGCTCTCTGCATGCTTGt                                                                                      >  2:2606013/1‑93 (MQ=255)

    cTGGCGTTTTCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTc                                                                                     <  1:1143661/93‑1 (MQ=255)

     tGGCGTTTTCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCg                                                                                    >  1:3638800/1‑93 (MQ=255)

       gCGTTTTCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAg                                                                                  <  2:2513166/93‑1 (MQ=255)

        cGTTTTCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGt                                                                                 >  1:665426/1‑93 (MQ=255)

        cGTTTTCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGt                                                                                 <  1:4580975/93‑1 (MQ=255)

        cGTTTTCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGt                                                                                 <  1:215838/93‑1 (MQ=255)

         gTTTTCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTa                                                                                >  2:1442917/1‑93 (MQ=255)

          ttttCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATACTTGTCGAGTAc                                                                               >  1:3415056/1‑93 (MQ=255)

           tttCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTAcc                                                                              >  2:4655169/1‑93 (MQ=255)

            ttCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCg                                                                             <  1:4670508/93‑1 (MQ=255)

             tCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCgg                                                                            >  2:1389584/1‑93 (MQ=255)

               ccAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCa                                                                          >  2:4155214/1‑93 (MQ=255)

               ccAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCa                                                                          <  2:1744170/93‑1 (MQ=255)

                cAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCag                                                                         >  2:711932/1‑93 (MQ=255)

                cAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCag                                                                         >  1:1415383/1‑93 (MQ=255)

                 aaCGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCagc                                                                        >  1:2349467/1‑92 (MQ=255)

                 aaCGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCaga                                                                        <  1:2522989/93‑1 (MQ=255)

                    gTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCa                                                                     >  1:1083913/1‑93 (MQ=255)

                        cAGTATCTCCCACCACATCCAGGATGTCATACTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTTGAGCACCGGCAGAGCacgat                                                                 >  2:2236465/1‑92 (MQ=255)

                          gTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGt                                                               >  2:3753534/1‑93 (MQ=255)

                          gTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGt                                                               >  2:550538/1‑93 (MQ=255)

                          gTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGt                                                               <  1:3666175/93‑1 (MQ=255)

                           tATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTc                                                              >  1:799356/1‑93 (MQ=255)

                           tATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTc                                                              <  2:2930191/93‑1 (MQ=255)

                            aTCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTcc                                                             <  2:2758864/93‑1 (MQ=255)

                             tctcCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCt                                                            <  2:2384230/93‑1 (MQ=255)

                               tcCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCttt                                                          <  2:1218101/93‑1 (MQ=255)

                               tcCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCttt                                                          <  2:587214/93‑1 (MQ=255)

                               tcCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCttt                                                          >  2:891038/1‑93 (MQ=255)

                               ccccACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCttt                                                          <  2:2359870/92‑1 (MQ=255)

                               ccccACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCttt                                                          <  2:3856890/92‑1 (MQ=255)

                                cccACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTa                                                         <  2:369007/93‑1 (MQ=255)

                                cccACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTa                                                         >  2:224151/1‑93 (MQ=255)

                                 ccaccaCATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTAt                                                        <  1:1447909/93‑1 (MQ=255)

                                   cccacATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCAGATGCTCTCTGCATGCTTGTCGCGTACCGGCAGATCACGACAACCTTTAtct                                                      >  1:687535/2‑93 (MQ=255)

                                   accacATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTAtct                                                      >  2:1727595/1‑93 (MQ=255)

                                     cacaTCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGCGCACGCCGTCCTTTATCTcc                                                    >  1:3980236/1‑93 (MQ=255)

                                     cacaTACAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATACTTGTCGAGTACCGGCAGAGCACGACGGCCTTTATCTcc                                                    >  1:4277515/1‑93 (MQ=255)

                                       caTCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCgg                                                  >  2:3799449/1‑93 (MQ=255)

                                        aTCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGgc                                                 >  1:2085380/1‑93 (MQ=255)

                                         tCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGgcg                                                <  2:1668738/93‑1 (MQ=255)

                                         tCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGgcg                                                >  1:1583633/1‑93 (MQ=255)

                                          ccAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGgcgc                                               >  1:3885450/1‑93 (MQ=255)

                                          ccAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGgcgc                                               >  1:4463461/1‑93 (MQ=255)

                                          ccAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGgcgc                                               <  1:12946/93‑1 (MQ=255)

                                            aGGATGTTATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCtt                                             >  2:1038005/1‑93 (MQ=255)

                                            aGGATGTCATCCTGAACTTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCtt                                             >  2:4008536/1‑93 (MQ=255)

                                             ggATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTa                                            >  1:3957439/1‑93 (MQ=255)

                                              gATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTaa                                           <  2:4746232/93‑1 (MQ=255)

                                               aTGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAAt                                          >  2:285024/1‑93 (MQ=255)

                                                tGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATg                                         >  1:862893/1‑93 (MQ=255)

                                                tGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATg                                         >  1:3011766/1‑93 (MQ=255)

                                                 gTCATCCTGAACCTGGAAGGCAAGGCGGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCAGGCGGTCTTTTATCTCCGGCGCTCAATGc                                        >  1:3333137/1‑93 (MQ=255)

                                                 gTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGc                                        >  1:3333136/1‑93 (MQ=255)

                                                    aTCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCAcc                                     >  1:4083488/1‑93 (MQ=255)

                                                     tCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCa                                    >  2:3303573/1‑93 (MQ=255)

                                                     tCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCa                                    >  2:4630545/1‑93 (MQ=255)

                                                     tCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCa                                    >  1:1484725/1‑93 (MQ=255)

                                                      ccTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCaa                                   <  2:4188731/93‑1 (MQ=255)

                                                      ccTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCaa                                   <  2:3581290/93‑1 (MQ=255)

                                                       cTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAg                                  >  1:4053212/1‑93 (MQ=255)

                                                         gAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGc                                >  2:3079827/1‑93 (MQ=255)

                                                          aaCCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCg                               <  2:2124231/93‑1 (MQ=255)

                                                           aCCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGa                              >  2:1333012/1‑93 (MQ=255)

                                                            ccTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGaa                             <  1:193357/93‑1 (MQ=255)

                                                             cTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCGCCAAGGCGAAc                            >  2:4567884/1‑93 (MQ=255)

                                                             cTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAAc                            <  1:3187/93‑1 (MQ=255)

                                                             cTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAAc                            >  2:2343764/1‑93 (MQ=255)

                                                             cTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAAc                            <  1:4662031/93‑1 (MQ=255)

                                                              tGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAAcg                           <  2:2753892/93‑1 (MQ=255)

                                                              tGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAAcg                           >  2:4004924/1‑93 (MQ=255)

                                                              tGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAAcg                           >  2:652422/1‑93 (MQ=255)

                                                               ggAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAAcgg                          >  1:1639012/1‑93 (MQ=255)

                                                                 aaggcaaggcCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAAcggcg                        >  1:2043242/1‑93 (MQ=255)

                                                                  agtcaaggcCGATGCTCTCTGCATGCTTGTCGAGTAGGGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAAcggcgg                       <  2:3239026/90‑1 (MQ=255)

                                                                   ggcaaggcCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACggcggc                      >  2:4714173/1‑93 (MQ=255)

                                                                   ggcaaggcCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACggcggc                      <  2:2102686/93‑1 (MQ=255)

                                                                   ggcaaggcCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACggcggc                      <  2:3832978/93‑1 (MQ=255)

                                                                    gcaaggcCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGgcggcg                     >  2:1279870/1‑93 (MQ=255)

                                                                       aggcCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGa                  >  1:1182439/1‑93 (MQ=255)

                                                                       aggcCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGa                  >  2:1816611/1‑93 (MQ=255)

                                                                       aggcCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGa                  >  2:383982/1‑93 (MQ=255)

                                                                        agcCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGaa                 <  1:1877721/92‑1 (MQ=255)

                                                                         gcCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAAt                >  1:129056/1‑93 (MQ=255)

                                                                              tGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCAATg           <  2:3349243/93‑1 (MQ=255)

                                                                               gCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCAATgc          <  1:1880901/93‑1 (MQ=255)

                                                                               gCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGGCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCAATgc          >  1:1909767/1‑93 (MQ=255)

                                                                                  ctctGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCAATGCGcc       <  2:145875/93‑1 (MQ=255)

                                                                                  ctctGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCAATGCGcc       <  1:2510860/93‑1 (MQ=255)

                                                                                   tctGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCAATGCGCCg      <  1:3683349/93‑1 (MQ=255)

                                                                                    ctGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCAATGCGCCgg     >  1:2245272/1‑93 (MQ=255)

                                                                                    ctGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCAATGCGCCgg     >  1:207681/1‑93 (MQ=255)

                                                                                     tGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCAATGCGCCGGt    >  2:4447816/1‑93 (MQ=255)

                                                                                     tGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCAATGCGCCGGt    >  1:935203/1‑93 (MQ=255)

                                                                                       cATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCAATGCGCCGGttt  >  1:3384223/1‑93 (MQ=255)

CACCCTGGCGTTTTCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATACTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCAATGCGCCGGTTT  >  NC_000913/439605‑439784

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`