BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,710,555	(T)_8→7	coding (9/699 nt)	b3548 ←	putative lipase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,710,548	0	T	.	99.6%	1256.2 / ‑3.4	272	coding (16/699 nt)	b3548	putative lipase
Reads supporting (aligned to +/- strand): ref base T (0/1); new base . (115/156); total (115/157)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 317 total aligned reads displayed.

GATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGAAGGATATCGGGCATAGTAGC  >  NC_000913/3710456‑3710636

  tatatTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCttt                                                                                        >  1:44305/1‑93 (MQ=255)

  tatatTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCttt                                                                                        >  2:5305698/1‑93 (MQ=255)

   atatTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCtttt                                                                                       <  1:1747048/93‑1 (MQ=255)

    tatTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCttttt                                                                                      >  2:2802094/1‑93 (MQ=255)

    tatTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCttttt                                                                                      <  1:1832046/93‑1 (MQ=255)

      ttCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCttttttt                                                                                    >  2:3154159/1‑93 (MQ=255)

      ttCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCttttttt                                                                                    >  2:5563247/1‑93 (MQ=255)

        cTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCtttttttat                                                                                  <  1:2350415/93‑3 (MQ=255)

         ttgttgCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCtttttttatg                                                                                 >  1:4539032/1‑90 (MQ=255)

         ttgttgCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCtttttttatg                                                                                 >  2:3538248/1‑90 (MQ=255)

           gttgCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGAt                                                                              <  2:4287595/93‑1 (MQ=255)

             tgCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCa                                                                            <  1:2071478/93‑1 (MQ=255)

             tgCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCa                                                                            >  2:2997678/1‑93 (MQ=255)

             tgCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCa                                                                            >  1:3241002/1‑93 (MQ=255)

             tgCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCa                                                                            <  1:4723668/93‑1 (MQ=255)

              gCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCAt                                                                           <  2:1670273/93‑1 (MQ=255)

              gCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCAt                                                                           <  2:5757848/93‑1 (MQ=255)

              gCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCAt                                                                           >  2:2407825/1‑93 (MQ=255)

                 aGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTaa                                                                        >  2:1200767/1‑93 (MQ=255)

                   gCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAaca                                                                      <  2:1754337/93‑1 (MQ=255)

                    cGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAacac                                                                     <  1:719304/93‑1 (MQ=255)

                    cGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAacac                                                                     <  1:5608858/93‑1 (MQ=255)

                    cGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAacac                                                                     <  2:1863147/93‑1 (MQ=255)

                       aaGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGAc                                                                  <  1:1182839/93‑1 (MQ=255)

                       aaGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGAc                                                                  <  2:5071035/93‑1 (MQ=255)

                        aGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACt                                                                 >  1:5307036/1‑93 (MQ=255)

                        aGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACt                                                                 <  2:6006520/93‑1 (MQ=255)

                          cTGTGTTGAGAAAAAAGGCACTGATTCCCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTcc                                                               <  2:3425964/93‑1 (MQ=255)

                          cTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTcc                                                               >  1:5481704/1‑93 (MQ=255)

                          cTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTcc                                                               <  1:4376686/93‑1 (MQ=255)

                          cTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTcc                                                               >  2:776696/1‑93 (MQ=255)

                            gtgtTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAg                                                             <  2:738644/93‑1 (MQ=255)

                              tttGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAggg                                                           <  2:267786/92‑1 (MQ=255)

                               ttGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGa                                                          >  1:3636714/1‑93 (MQ=255)

                                tGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGaa                                                         <  1:502477/93‑1 (MQ=255)

                                 taaaaaaaaGGCACTGGTTACCACGGTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAag                                                        <  1:4023124/90‑1 (MQ=255)

                                 gagaAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAag                                                        <  1:2540374/93‑1 (MQ=255)

                                  agaAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTCACACGACTCCAGGGAaga                                                       >  1:5778867/1‑93 (MQ=255)

                                  agaAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAaga                                                       >  2:4645378/1‑93 (MQ=255)

                                   gaAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAagag                                                      <  2:6680725/93‑1 (MQ=255)

                                    aaaaaaGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGc                                                     <  1:665112/93‑1 (MQ=255)

                                     aaaaaGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGcc                                                    >  2:5407229/1‑93 (MQ=255)

                                     aaaaaGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGcc                                                    >  2:961357/1‑93 (MQ=255)

                                     aaaaaGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGcc                                                    >  2:3887730/1‑93 (MQ=255)

                                       aaaGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGa                                                  >  1:217617/1‑93 (MQ=255)

                                        aaGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGaa                                                 >  1:143685/1‑93 (MQ=255)

                                         aGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAAt                                                <  1:6081399/93‑1 (MQ=255)

                                           gCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTc                                              <  2:5041113/93‑1 (MQ=255)

                                            cACTGATTCCCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCg                                             <  2:4757822/93‑1 (MQ=255)

                                             aCTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCCGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCgg                                            >  2:1089000/1‑93 (MQ=255)

                                             aCTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCgg                                            >  1:3815676/1‑93 (MQ=255)

                                             aCTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCgg                                            >  1:5363162/1‑93 (MQ=255)

                                              ctcaTTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGc                                           <  1:593926/90‑1 (MQ=255)

                                               tGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCa                                          <  1:2282556/93‑1 (MQ=255)

                                                gATTACCACGCTCTCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCaa                                         <  2:5433432/93‑1 (MQ=255)

                                                gATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGCCCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGACGAATTCGGCaa                                         <  1:669596/93‑1 (MQ=255)

                                                gATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCaa                                         >  1:3574928/1‑93 (MQ=255)

                                                gATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCaa                                         >  2:4573368/1‑93 (MQ=255)

                                                gATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTAGGCaa                                         >  1:6167411/1‑93 (MQ=255)

                                                  ttACCCCGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAata                                       <  2:4676097/93‑1 (MQ=255)

                                                  ttACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAata                                       <  1:3794056/93‑1 (MQ=255)

                                                     ccACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAATACGACTCCAGGGAAGAGCCGAATTCGGCAAtatta                                    <  2:1371169/93‑1 (MQ=255)

                                                     ccACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAAtatta                                    >  1:1915680/1‑93 (MQ=255)

                                                      cACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAAtattat                                   >  1:3473015/1‑93 (MQ=255)

                                                       ccGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATattatt                                  <  1:5200181/92‑1 (MQ=255)

                                                       aCGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATattatt                                  <  1:2121691/93‑1 (MQ=255)

                                                       aCGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATattatt                                  >  1:4265422/1‑93 (MQ=255)

                                                       aCGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATattatt                                  >  2:6368923/1‑93 (MQ=255)

                                                       aCGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATattatt                                  >  1:5842892/1‑93 (MQ=255)

                                                        cGCTCGCCAGCAGGCTTAGCTGCCAGCGCTCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTg                                 <  2:2129899/93‑1 (MQ=255)

                                                        cGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTg                                 <  1:1135193/93‑1 (MQ=255)

                                                        cGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTg                                 >  2:2164175/1‑93 (MQ=255)

                                                         gCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGt                                <  2:3854762/93‑1 (MQ=255)

                                                         gCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGt                                <  1:1696726/93‑1 (MQ=255)

                                                          cTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTc                               <  2:3360458/93‑1 (MQ=255)

                                                          cTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTc                               >  1:769337/1‑93 (MQ=255)

                                                             gCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCAtt                            <  1:1542097/93‑1 (MQ=255)

                                                             gCCAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCAtt                            <  2:671602/93‑1 (MQ=255)

                                                              ccAGCAGGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTg                           <  2:5800417/93‑1 (MQ=255)

                                                                agcagGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTa                         >  2:3311822/1‑93 (MQ=255)

                                                                agcagGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTa                         >  2:6242137/1‑93 (MQ=255)

                                                                 gcagGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTAt                        >  1:2098288/1‑93 (MQ=255)

                                                                 gcagGCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTAt                        >  2:570265/1‑93 (MQ=255)

                                                                    ggCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGaa                     <  1:4797215/93‑1 (MQ=255)

                                                                    ggCTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGaa                     <  2:2837326/93‑1 (MQ=255)

                                                                      cTTAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGAAgg                   <  2:1603665/93‑1 (MQ=255)

                                                                       ttAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGAAGGa                  <  2:45138/93‑1 (MQ=255)

                                                                        tAGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGAAGGat                 <  1:5074125/93‑1 (MQ=255)

                                                                         aGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGAAGGata                <  1:297834/93‑1 (MQ=255)

                                                                         aGCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGAAGGata                <  2:4107189/93‑1 (MQ=255)

                                                                          gCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGAAGGatat               <  1:612354/93‑1 (MQ=255)

                                                                          gCTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGAAGGatat               <  1:1360352/93‑1 (MQ=255)

                                                                           cTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGAAGGATATc              <  1:2786164/93‑1 (MQ=255)

                                                                           cTGCCAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGAAGGATATc              <  1:4512040/93‑1 (MQ=255)

                                                                              ccAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGAAGGATATCggg           <  1:3143830/93‑1 (MQ=255)

                                                                              ccAGCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGAAGGATATCggg           <  1:633755/93‑1 (MQ=255)

                                                                                 gCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGAAGGATATCGGGCAt        <  1:5752522/93‑1 (MQ=255)

                                                                                 gCGACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGAAGGATATCGGGCAt        >  2:1520951/1‑93 (MQ=255)

                                                                                   gACCACCGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGAAGGATATCGGGCAtag      <  1:1016151/93‑1 (MQ=255)

                                                                                       accGC‑TTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGAAGGATATCGGGCATAGTAGc  >  2:4417184/1‑93 (MQ=255)

GATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGAAGGATATCGGGCATAGTAGC  >  NC_000913/3710456‑3710636

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`