| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,778,658 | (C)5→4 | intergenic (+14/‑184) | lldD → / → yibK | L‑lactate dehydrogenase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,778,654 | 0 | C | . | 95.5% | 460.8 / 10.8 | 111 | intergenic (+10/‑188) | lldD/yibK | L‑lactate dehydrogenase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (4/1); new base . (3/103); total (7/104) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.86e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.89e-01 | |||||||||||
Only 100 of 147 total aligned reads displayed.
TTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑C‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTC > NC_000913/3778562‑3778746 | ttACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTgcg‑c < 1:3313373/93‑1 (MQ=255)ttACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTgcg‑c < 1:6667760/93‑1 (MQ=255) tACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑c‑c > 2:3346710/1‑93 (MQ=255) aCGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑c‑cc < 1:2034790/93‑1 (MQ=255) cGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑c‑ccc < 2:2926549/93‑1 (MQ=255) gCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑c‑ccct < 1:3353003/93‑2 (MQ=255) gCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑c‑acct > 2:725951/1‑92 (MQ=255) aGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑c‑tcctccc > 2:5594510/1‑89 (MQ=255) aGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑c‑ccccccc > 2:6096141/1‑90 (MQ=255) aGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑c‑accccac > 1:5588042/1‑90 (MQ=255) gATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑g‑cccccccc > 2:4794899/1‑89 (MQ=255) gATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑c‑cccccccc > 2:4000511/1‑89 (MQ=255) gATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑c‑cccccccc > 2:4000512/1‑89 (MQ=255) gATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑c‑cccccacc > 2:2251645/1‑89 (MQ=255) gATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCAcc > 1:3085151/1‑93 (MQ=255) gATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCAcc < 1:6075018/93‑1 (MQ=255) aTTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCAccc < 1:1007916/93‑1 (MQ=255) ttCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCt < 1:4973947/93‑1 (MQ=255) gtCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCt < 1:515282/92‑1 (MQ=255) cGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTaa < 2:2860124/93‑1 (MQ=255) cTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CGCCCCTCccccccc > 2:4881488/1‑90 (MQ=255) tGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAAccc < 1:3317238/93‑1 (MQ=255) ggTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑G‑CCCCCCTCCCCAcccc > 1:538619/1‑93 (MQ=255) gTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCctc < 1:5865082/93‑1 (MQ=255) gTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCctc < 2:3691673/93‑1 (MQ=255) gTGCAGCGGCTGGGTAAAGAGTTACCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCctt < 1:3244957/93‑2 (MQ=255) tGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACGCTAACCctct < 1:2928120/93‑1 (MQ=255) tGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCctct < 1:459719/93‑1 (MQ=255) tGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCctct < 2:4556881/93‑1 (MQ=255) tGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGAGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCctct < 1:5856311/93‑1 (MQ=255) gCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCtctc < 2:5688427/93‑1 (MQ=255) agaggCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCGCACCCTAACCCTCTccc < 1:2783583/90‑1 (MQ=255) aGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑C‑CCCTCCACCCTAACCcttccc > 2:5584188/1‑89 (MQ=255) aGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTccc < 2:2439880/93‑1 (MQ=255) gggCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTccccc > 1:5526388/1‑91 (MQ=255) gCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCC‑CCCCTCTCCCAACCCCTCTccccc > 2:2065680/1‑91 (MQ=255) gCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑C‑CCCCCCCCCCAAccccccccccccg > 2:4434133/1‑90 (MQ=255) gCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAg < 2:2699016/93‑1 (MQ=255) gCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAg < 1:223192/93‑1 (MQ=255) gCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAg < 2:2307482/93‑1 (MQ=255) tGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAggg < 2:280708/93‑1 (MQ=255) gggTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGga < 2:2321358/93‑1 (MQ=255) gggTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGga < 1:1012664/93‑1 (MQ=255) gggTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGga < 1:4326766/93‑1 (MQ=255) ggTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGgag < 1:5205372/93‑1 (MQ=255) gTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGgaga < 1:1362104/93‑1 (MQ=255) gTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGgaga < 2:3344783/93‑1 (MQ=255) tAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGagag < 2:2818159/93‑1 (MQ=255) aaaGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAgg < 1:4674941/93‑1 (MQ=255) aaGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAggg < 2:6396344/93‑1 (MQ=255) aaGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAggg < 2:5345465/93‑1 (MQ=255) gagTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGa < 1:6705568/93‑1 (MQ=255) agTTGCCTGCTGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑C‑CCCC‑CACCCTAACCCTCTCCCTCAGGGAGAGGGGAc < 1:1798516/93‑1 (MQ=255) agTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGAc < 1:481935/93‑1 (MQ=255) agTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGAc < 1:6483347/93‑1 (MQ=255) gTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGAcc < 2:1541060/93‑1 (MQ=255) tGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGt < 2:3515845/93‑1 (MQ=255) tGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGt < 2:4863518/93‑1 (MQ=255) tccTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGtt < 1:2562428/92‑1 (MQ=255) gCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCATAACCCTCTCCCTCAGGGAGAGGGGACCGtt > 1:6507238/1‑93 (MQ=255) gCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCCTTTGCG‑‑‑CCCCTCCCCCTAACCCTCTCCCTCAGGGAGAGGGGACCGtt < 2:837376/93‑1 (MQ=38) ccTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTc < 1:6301166/93‑1 (MQ=255) cACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtg < 1:3566332/93‑1 (MQ=255) cTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑C‑ACCC‑CACCCTAACCCCCTCCCTCTCGGAGGGGGGGCCGGTTGGGGCtgtg > 2:2159827/1‑92 (MQ=255) ggCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtgtatg < 2:719935/93‑1 (MQ=255) ggCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtgtatg < 1:2074707/93‑1 (MQ=255) ggCACCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACGCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtgtatg < 2:433540/93‑1 (MQ=38) gCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtgtatgt < 2:1173384/93‑1 (MQ=255) cccATGGCGAAAGGGAATGCGGCATATTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTTCt < 2:1375105/93‑1 (MQ=37) aTGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTccc < 2:4638109/93‑1 (MQ=255) ggCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTc < 1:1023443/93‑1 (MQ=255) gCGAAAGGGAATGCGGCATAGTCGTTTGCG‑C‑CCCC‑CACCCCCACCCCCCCCCCCTTGGGGAGGGGGGCGGTCGGGGCTGTTTGTACTCCCTcc > 2:3013129/1‑92 (MQ=255) gCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCa < 2:663152/93‑1 (MQ=255) cGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCAc < 1:559261/93‑1 (MQ=255) aaaGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCActc < 1:6308197/93‑1 (MQ=255) aaaGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCActc < 1:3625457/93‑1 (MQ=255) aaaGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCActc < 1:5315533/93‑1 (MQ=255) aaaGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCActc < 1:4230053/93‑1 (MQ=255) aaGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCActct < 1:5427707/93‑1 (MQ=255) aGGGAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTg < 2:3064278/93‑1 (MQ=255) gggAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGa < 1:5956611/93‑1 (MQ=255) gggAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGa < 2:2970395/93‑1 (MQ=255) ggAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGaa < 2:4277949/93‑1 (MQ=255) gAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGaaa < 1:222703/93‑1 (MQ=255) gAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGaaa < 1:3049321/93‑1 (MQ=255) gAATGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGaaa < 2:5185542/93‑1 (MQ=255) aaTGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAAc < 1:3512304/93‑1 (MQ=255) aaTGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAAc < 2:1680587/93‑1 (MQ=255) tGCGGCATAGTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGa < 1:2566037/93‑1 (MQ=255) aTAGTCGTTTGCG‑‑‑CCCCTCCCCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGCCACCGc < 1:1742565/93‑1 (MQ=38) gTCGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCAct < 2:6124329/93‑1 (MQ=255) tCGTTTGC‑‑T‑CCCCTCTCCTTACCCTTCTCCCTCAGGGAGAGCGGACCGTGCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCActc < 1:1490083/93‑1 (MQ=255) cGTTTGCG‑‑‑CCCCTCACCCTACCCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCActct < 1:5166148/93‑1 (MQ=255) cGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCActct < 1:6665013/93‑1 (MQ=255) cGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCActct < 2:4498300/93‑1 (MQ=255) cGTTTGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCActct < 2:827836/93‑1 (MQ=255) tttGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCttt < 2:5056781/93‑1 (MQ=255) tttGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCttt < 2:2343402/93‑1 (MQ=255) tttGCG‑‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGAGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCttt < 1:3019266/93‑1 (MQ=255) ttGCG‑‑‑CCCCTCTCCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACGCCCTCGCTCTGAAACGACACCGCACTCtttt < 1:3037187/93‑1 (MQ=37) | TTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑C‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTC > NC_000913/3778562‑3778746 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |