BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,935,564	(A)_5→4	coding (645/930 nt)	rbsK →	ribokinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,935,560	0	A	.	100.0%	1202.7 / NA	258	coding (641/930 nt)	rbsK	ribokinase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (132/126); total (132/126)

Only 100 of 282 total aligned reads displayed.

TATTACGCCAAACGAAACGGAAGCAGAAAAGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATGAAAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAGGTCAGCGCGTTCCTGGATTC  >  NC_000913/3935468‑3935648

  ttaCGCCAAACGAAACGGAAGCAGAAAAGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATGaaa                                                                                        >  2:4020797/1‑93 (MQ=255)

   taCGCCAAACGAAACGGAAGCAGAAAAGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATGaaaa                                                                                       <  2:4146394/93‑1 (MQ=255)

   taCGACAAACGAAACGGAAGCAGAAACGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATGaaaa                                                                                       <  1:4616541/93‑1 (MQ=255)

    aCGCCAAACGAAACGGAAGCAGAAAAGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATGaaaag                                                                                      <  1:210874/93‑2 (MQ=255)

      gCCAAACGAAACGGAAGCAGAAAAGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCGGCGAAGGCGGCGCAGGTACTGCATGaaacggg                                                                                    >  2:2784373/1‑89 (MQ=255)

       ccAAACGAAACGGAAGCAGAAAAGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATGaaaaggta                                                                                   <  2:3611329/93‑5 (MQ=255)

       ccAAACGAAACGGAAGCAGAAAAGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATGaaaaggta                                                                                   <  2:3675945/93‑5 (MQ=255)

         aaacgaaacgGAAGCAGAAAAGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATc                                                                                <  2:4918233/93‑1 (MQ=255)

         aaacgaaacgGAAGCAGAAAAGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATc                                                                                >  1:1015725/1‑93 (MQ=255)

         aaacgaaacgGAAGCAGAAAAGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATc                                                                                >  1:1413863/1‑93 (MQ=255)

          aacgaaacgGAAGCAGAAAAGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATcc                                                                               >  2:760544/1‑93 (MQ=255)

          aacgaaacgGAAGCAGAAAAGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATcc                                                                               >  1:3635139/1‑93 (MQ=255)

           acgaaacgGAAGCAGAAAAGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCg                                                                              >  2:5854336/1‑93 (MQ=255)

            cgaaacgGAAGCAGAAAAGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCgt                                                                             >  1:1659384/1‑93 (MQ=255)

              aaacgGAAGCAGAAAAGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCgtac                                                                           <  1:1531891/93‑1 (MQ=255)

              aaacgGAAGCAGAAAAGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCgtac                                                                           <  1:6214173/93‑1 (MQ=255)

              aaacgGAAGCAGAAAAGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCgtac                                                                           <  1:2655657/93‑1 (MQ=255)

               aacgGAAGCAGAAAAGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCgtact                                                                          >  2:80486/1‑93 (MQ=255)

                    aaGCAGAAAAGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCgtactgtact                                                                     <  2:2359068/93‑1 (MQ=255)

                      gCAGAAAAGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGa                                                                   <  1:6106436/93‑1 (MQ=255)

                      gCAGAAAAGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGa                                                                   <  1:3067144/93‑1 (MQ=255)

                       cAGAAAAGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGAt                                                                  <  2:4604819/93‑1 (MQ=255)

                        aGAAAAGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGAtt                                                                 <  1:1770207/93‑1 (MQ=255)

                         gAAAAGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTa                                                                >  2:5002809/1‑93 (MQ=255)

                         gAAAAGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTa                                                                >  2:5414376/1‑93 (MQ=255)

                          aaaaGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTAc                                                               <  2:2425649/93‑1 (MQ=255)

                          aaaaGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTAc                                                               >  1:3645046/1‑93 (MQ=255)

                            aaGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACtt                                                             >  2:4372414/1‑93 (MQ=255)

                            aaGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACtt                                                             <  1:2285677/93‑1 (MQ=255)

                             aGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACttt                                                            <  2:2742322/93‑1 (MQ=255)

                               cTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAg                                                          <  1:5281419/93‑1 (MQ=255)

                                 cACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGa                                                        >  1:567389/1‑93 (MQ=255)

                                 cACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGa                                                        >  1:1083309/1‑93 (MQ=255)

                                  aCCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGaa                                                       <  2:6288697/93‑1 (MQ=255)

                                   ccGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAg                                                      <  1:723941/93‑1 (MQ=255)

                                    cGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGt                                                     >  1:3262002/1‑93 (MQ=255)

                                     ggTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTc                                                    >  1:3499685/1‑93 (MQ=255)

                                     ggTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTc                                                    >  2:4325004/1‑93 (MQ=255)

                                     ggTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTc                                                    >  2:433446/1‑93 (MQ=255)

                                     ggTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTc                                                    <  1:2071057/93‑1 (MQ=255)

                                     ggTATTCGTGTTGAAAAGGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTTCTTTAGGAAGTc                                                    <  1:2567586/93‑1 (MQ=255)

                                        aTTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCgtg                                                 <  2:94624/93‑1 (MQ=255)

                                        aTTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCgtg                                                 >  1:2995357/1‑93 (MQ=255)

                                         ttCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCgtgg                                                >  2:3533899/1‑93 (MQ=255)

                                           cGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCgtggtg                                              <  1:6225086/93‑1 (MQ=255)

                                            gtgtTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGgtgt                                             <  1:5844554/93‑1 (MQ=255)

                                            gtgtTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGgtgt                                             <  1:2496099/93‑1 (MQ=255)

                                              gtTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTAt                                           <  2:1488330/93‑1 (MQ=255)

                                               ttGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATg                                          <  1:3576404/93‑1 (MQ=255)

                                               ttGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATg                                          <  2:4990018/93‑1 (MQ=255)

                                                  aaaaTGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGc                                       >  1:1955477/1‑93 (MQ=255)

                                                   aaaTGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCt                                      <  2:3866841/93‑1 (MQ=255)

                                                   aaaTGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCt                                      <  1:5191853/93‑1 (MQ=255)

                                                     atgatgAAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAg                                    >  2:1953989/1‑93 (MQ=255)

                                                       gatgaAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCg                                  >  1:1227655/1‑93 (MQ=255)

                                                       gatgaAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCg                                  >  1:2936844/1‑93 (MQ=255)

                                                       gatgaAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGCATGGGCTAGCg                                  >  2:885170/1‑93 (MQ=255)

                                                       gatgaAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTCTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCg                                  >  2:6435956/1‑93 (MQ=255)

                                                         tgaAGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTg                                <  1:4287116/93‑1 (MQ=255)

                                                            aGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAAt                             >  2:1333245/1‑93 (MQ=255)

                                                            aGATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAAt                             >  2:1897924/1‑93 (MQ=255)

                                                             gATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATg                            >  1:3896754/1‑93 (MQ=255)

                                                             gATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATg                            >  2:3361198/1‑93 (MQ=255)

                                                             gATGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATg                            >  2:2647277/1‑93 (MQ=255)

                                                              aTGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATgg                           <  2:6529760/93‑1 (MQ=255)

                                                              aTGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTAGTGTATGGGCTAGCGTGAATgg                           <  1:1484755/93‑1 (MQ=255)

                                                               tGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGt                          >  2:1098186/1‑93 (MQ=255)

                                                               tGCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGt                          >  1:2469209/1‑93 (MQ=255)

                                                                gCAGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTg                         >  2:5555776/1‑93 (MQ=255)

                                                                  aGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGaa                       >  1:4426758/1‑93 (MQ=255)

                                                                  aGCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGaa                       <  1:6009026/93‑1 (MQ=255)

                                                                   gCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAg                      <  1:1159374/93‑1 (MQ=255)

                                                                   gCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAg                      <  2:1381362/93‑1 (MQ=255)

                                                                   gCGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAg                      >  1:4338475/1‑93 (MQ=255)

                                                                   acGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAg                      <  2:1683767/92‑1 (MQ=255)

                                                                    cGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAgg                     >  2:3164491/1‑93 (MQ=255)

                                                                    cGAAGGCGGCGCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAgg                     <  1:4826020/93‑1 (MQ=255)

                                                                        ggcggcGCAGGTACTGCATG‑AAAAGGGATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAGGTCAg                 >  1:2689714/1‑93 (MQ=255)

                                                                          cggcgCAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAGGTCAgcg               >  2:5917693/1‑93 (MQ=255)

                                                                             cgcAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAGGTCAGCGCGt            <  2:3146979/93‑1 (MQ=255)

                                                                             cgcAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAGGTCAGCGCGt            <  2:2136970/93‑1 (MQ=255)

                                                                             cgcAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAGGTCAGCGCGt            <  2:2178834/93‑1 (MQ=255)

                                                                              gcAGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAGGTCAGCGCGtt           >  1:1321923/1‑93 (MQ=255)

                                                                                aGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAGGTCAGCGCGTTcc         >  1:861135/1‑93 (MQ=255)

                                                                                aGGTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAGGTCAGAGCGTTcc         >  2:3775591/1‑93 (MQ=255)

                                                                                 ggTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAGGTCAGCGCGTTCCt        >  2:3052738/1‑93 (MQ=255)

                                                                                 ggTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAGGTCAGCGCGTTCCt        >  2:619517/1‑93 (MQ=255)

                                                                                 ggTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAGGTCAGCGCGTTCCt        <  2:6734215/93‑1 (MQ=255)

                                                                                  gTACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAGGTCAGCGCGTTCCTg       <  1:406978/93‑1 (MQ=255)

                                                                                   tACTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGGAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAGGTCAGCGCGTTCCTgg      >  2:4703690/1‑93 (MQ=255)

                                                                                    aCTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAGGTCAGCGCGTTCCTGGa     >  2:3493462/1‑93 (MQ=255)

                                                                                    aCTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAGGTCAGCGCGTTCCTGGa     <  2:1238718/93‑1 (MQ=255)

                                                                                    aCTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAGGTCAGCGCGTTCCTGGa     <  2:6684111/93‑1 (MQ=255)

                                                                                     cTGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAGGTCAGCGCGTTCCTGGAt    <  1:4190216/93‑1 (MQ=255)

                                                                                      tGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAGGTCAGCGCGTTCCTGGAtt   <  1:2200840/93‑1 (MQ=255)

                                                                                      tGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAGGTCAGCGCGTTCCTGGAtt   >  2:1217699/1‑93 (MQ=255)

                                                                                      tGCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAGGTCAGCGCGTTCCTGGAtt   >  1:3179502/1‑93 (MQ=255)

                                                                                       gCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAGGTTAGCGCGTTCCTGGATTc  >  1:6416925/1‑93 (MQ=255)

                                                                                       gCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAGGTCAGCGCGTTCCTGGATTc  >  2:5147181/1‑93 (MQ=255)

                                                                                       gCATG‑AAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAGGTCAGCGCGTTCCTGGATTc  >  1:5242933/1‑93 (MQ=255)

TATTACGCCAAACGAAACGGAAGCAGAAAAGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATGAAAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAGGTCAGCGCGTTCCTGGATTC  >  NC_000913/3935468‑3935648

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`