| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,478,503 | (A)7→6 | intergenic (+12/+47) | yjgN → / ← valS | hypothetical protein/valine tRNA synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,478,497 | 0 | A | . | 99.6% | 1280.0 / ‑3.1 | 276 | intergenic (+6/+53) | yjgN/valS | hypothetical protein/valine tRNA synthetase |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base . (166/109); total (166/110) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 309 total aligned reads displayed.
CCTTTAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAAGGCCGGATGCATGCTCCGGCCTTGCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTT > NC_000913/4478405‑4478587 | ccttTAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATa < 1:3466716/93‑1 (MQ=255)ccttTAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATa < 2:6179544/93‑1 (MQ=255) cttTAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATaa > 1:6259629/1‑93 (MQ=255) tttAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATaaa > 1:4520558/1‑93 (MQ=255) tttAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATaaa > 1:2951520/1‑93 (MQ=255) tttAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATaaa < 1:6351290/93‑1 (MQ=255) ttAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATaaaa < 1:2179200/93‑1 (MQ=255) aaTCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATaaaaaa < 2:1759087/93‑1 (MQ=255) tCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATaaaaaagg < 2:3625785/93‑3 (MQ=255) cAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATaaaaaaggc < 2:5790228/93‑4 (MQ=255) aTAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCg > 2:3156896/1‑93 (MQ=255) aTAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCg > 1:6012203/1‑93 (MQ=255) aTAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCg < 1:2917732/93‑1 (MQ=255) tAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCgg > 2:6592407/1‑93 (MQ=255) tAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCgg < 2:4667793/93‑1 (MQ=255) aagaagAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGag > 1:2859954/1‑92 (MQ=255) aagaagAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGag > 1:5680281/1‑92 (MQ=255) agaagaACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGagc < 2:519518/93‑3 (MQ=255) agaagaACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGagc > 1:5544811/1‑91 (MQ=255) agaagaACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGagc > 2:147313/1‑91 (MQ=255) gaagaaCAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGagca > 1:5790288/1‑90 (MQ=255) gaagaaCAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGagca < 1:3872148/93‑4 (MQ=255) aagaaCAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGagcat > 2:1525722/1‑89 (MQ=255) caacCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTct < 2:372284/93‑2 (MQ=255) ccAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGc > 1:6140981/1‑93 (MQ=255) gATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCtt < 1:432034/93‑1 (MQ=255) aTAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCttc > 2:1950994/1‑92 (MQ=255) tAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCttcg < 2:3426785/93‑3 (MQ=255) tAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCttcg > 1:3118458/1‑91 (MQ=255) aaaGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCttcgt > 2:6682700/1‑90 (MQ=255) aaaCGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCCTTACCATTTCTGTAAGAGAT‑AAAAAAGGCGGGA‑GCATGCTCTGGCCttcgt < 1:908171/93‑4 (MQ=255) aaGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCttcgtt > 2:2769275/1‑89 (MQ=255) aGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGttt < 1:1620963/93‑1 (MQ=255) aGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGttt < 2:1332139/93‑1 (MQ=255) aGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGttt < 1:4135522/93‑1 (MQ=255) aGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGttt < 2:2353203/93‑1 (MQ=255) aGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGttt < 2:5944612/93‑1 (MQ=255) ggCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGtttt > 2:3530504/1‑93 (MQ=255) ggCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGtttt > 1:2391870/1‑93 (MQ=255) ggCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGtttt > 1:4250759/1‑93 (MQ=255) ggCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGtttt > 1:2774825/1‑93 (MQ=255) ggCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGtttt > 2:243042/1‑93 (MQ=255) gCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGtttta > 1:3349895/1‑92 (MQ=255) ttcttAGACAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGTCGGA‑GCATGCTCTGGCCTT‑CGTTTtcat > 1:4204764/1‑93 (MQ=255) tcttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTtcatc < 1:1036076/93‑1 (MQ=255) tcttAGCCAGTATTTCACGGGGAGTTATGCATTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTtcatc < 1:2100361/93‑1 (MQ=255) tcttAGACAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTtcatc > 1:1502100/1‑93 (MQ=255) cttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCAATTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTtcatca > 1:5436117/1‑93 (MQ=255) cttAGCCAGTATTTCACGGCGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTtcatca < 1:2289376/93‑1 (MQ=255) ttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCAc > 2:3017562/1‑93 (MQ=255) gCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACtgt < 1:3301207/93‑1 (MQ=255) cAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTgtgt < 1:5861922/93‑1 (MQ=255) cAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTgtgt < 2:4333406/93‑1 (MQ=255) gTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGttt > 2:3071518/1‑93 (MQ=255) tATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGtttt > 2:5874019/1‑93 (MQ=255) tATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGtttt > 1:5909407/1‑93 (MQ=255) aTTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTg > 2:3845466/1‑93 (MQ=255) tCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGAtt < 2:3495922/93‑1 (MQ=255) tCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGAtt < 1:1175338/93‑1 (MQ=255) tCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGAtt < 1:4406790/93‑1 (MQ=255) ggggAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAg > 2:3461802/1‑93 (MQ=255) gggAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAgc < 2:5587046/93‑1 (MQ=255) ttATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCgcggc > 2:4124992/1‑93 (MQ=255) aTGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGG‑CTTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGa < 1:3380659/93‑1 (MQ=255) tGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGAt > 2:4557870/1‑93 (MQ=255) gCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATa > 1:6697421/1‑93 (MQ=255) cttcttTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAc > 2:6102927/1‑93 (MQ=255) cttcttTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAc > 2:1085273/1‑93 (MQ=255) cttcttTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAc > 2:2243493/1‑93 (MQ=255) cttcttTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAc > 2:2555870/1‑93 (MQ=255) cttTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGc < 1:5000507/93‑1 (MQ=255) tttACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGcc > 2:722129/1‑93 (MQ=255) ttACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCct < 2:1645746/93‑1 (MQ=255) ttACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCct < 2:4922502/93‑1 (MQ=255) tACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctg > 2:3579016/1‑93 (MQ=255) tACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctg > 1:5025794/1‑93 (MQ=255) aCCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctgc > 1:203943/1‑93 (MQ=255) aCCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctgc > 2:5969790/1‑93 (MQ=255) ccATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctgct > 1:4758776/1‑93 (MQ=255) ccATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctgct > 2:4513868/1‑93 (MQ=255) aTTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGt < 2:3922841/93‑1 (MQ=255) tttCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGtt > 1:5416540/1‑93 (MQ=255) tttCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGtt > 1:1796753/1‑93 (MQ=255) tttCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGtt > 2:1717050/1‑93 (MQ=255) tttCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGtt < 1:65745/93‑1 (MQ=255) ttCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATTCTTGGTCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGCCGATAACAGCCTGCTGTTc < 1:2667203/93‑1 (MQ=255) ttCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTc > 2:5428363/1‑93 (MQ=255) cTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCaa > 2:4370876/1‑93 (MQ=255) tGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAAt < 2:4852822/93‑1 (MQ=255) gTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATc > 1:2565911/1‑93 (MQ=255) gTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATc > 2:405038/1‑93 (MQ=255) tAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCa > 1:5251813/1‑93 (MQ=255) aaGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAg < 1:1243049/93‑1 (MQ=255) aaGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAg > 1:3742701/1‑93 (MQ=255) agagAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGt < 2:1017086/93‑1 (MQ=255) agagAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGGTCAATCAGt > 2:5059791/1‑93 (MQ=255) agagAT‑AAAAAAGGCCGGA‑ACATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGt < 2:1855211/93‑1 (MQ=255) gagaT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtt > 1:1970562/1‑93 (MQ=255) gagaT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtt > 2:4890608/1‑93 (MQ=255) gagaT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtt > 2:4235901/1‑93 (MQ=255) | CCTTTAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAAGGCCGGATGCATGCTCCGGCCTTGCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTT > NC_000913/4478405‑4478587 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |