BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,478,511	Δ1 bp	intergenic (+20/+39)	yjgN → / ← valS	hypothetical protein/valine tRNA synthetase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,478,511	0	T	.	100.0%	1320.9 / NA	284	intergenic (+20/+39)	yjgN/valS	hypothetical protein/valine tRNA synthetase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (163/121); total (163/121)

Only 100 of 297 total aligned reads displayed.

AGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAAGGCCGGATGCATGCTCCGGCCTTGCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTT  >  NC_000913/4478422‑4478599

agaaCAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGga‑gcatg                                                                                     >  1:2797038/1‑93 (MQ=255)

agaaCAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGga‑gcatg                                                                                     >  1:2355257/1‑93 (MQ=255)

 gaaCAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGga‑gcatgc                                                                                    >  2:4592534/1‑93 (MQ=255)

  aacaacCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCt                                                                                   <  2:3600774/93‑1 (MQ=255)

   acaacCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTc                                                                                  >  2:3963303/1‑93 (MQ=255)

     aacCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTctg                                                                                <  2:2527009/93‑3 (MQ=255)

       ccAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGc                                                                              >  1:6140981/1‑93 (MQ=255)

        cAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGcc                                                                             <  1:3743491/93‑1 (MQ=255)

          gATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCtt                                                                           <  1:5421976/93‑1 (MQ=255)

          gATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCtt                                                                           >  2:5804805/1‑93 (MQ=255)

          gATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCtt                                                                           <  1:432034/93‑1 (MQ=255)

            tAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCttcg                                                                         <  2:172754/93‑3 (MQ=255)

             aaaGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCttcgt                                                                        >  2:6682700/1‑90 (MQ=255)

             aaaGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCttcgt                                                                        <  1:2590045/93‑4 (MQ=255)

             aaaGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCttcgt                                                                        >  2:1486539/1‑90 (MQ=255)

             aaaCGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCCTTACCATTTCTGTAAGAGAT‑AAAAAAGGCGGGA‑GCATGCTCTGGCCttcgt                                                                        <  1:908171/93‑4 (MQ=255)

              aaGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCttcgtt                                                                       >  2:3912003/1‑89 (MQ=255)

              aaGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCttcgtt                                                                       >  2:2769275/1‑89 (MQ=255)

              aaGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCttcgtt                                                                       >  2:3707038/1‑89 (MQ=255)

               aGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGttt                                                                     <  1:122477/93‑1 (MQ=255)

               aGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGttt                                                                     <  1:4135522/93‑1 (MQ=255)

               aGGCTTCTGAGCCAGTATTTCACAGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCAGGCTCTGGCCTT‑CGttt                                                                     <  1:2733886/93‑1 (MQ=255)

                ggCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGtttt                                                                    >  2:243042/1‑93 (MQ=255)

                ggCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGtttt                                                                    >  1:4250759/1‑93 (MQ=255)

                 gCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTtc                                                                   <  2:4977992/93‑1 (MQ=255)

                   ttcttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTtcat                                                                 >  2:1078696/1‑93 (MQ=255)

                   ttcttAGACAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGTCGGA‑GCATGCTCTGGCCTT‑CGTTTtcat                                                                 >  1:4204764/1‑93 (MQ=255)

                    tcttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTtcatc                                                                <  1:1036076/93‑1 (MQ=255)

                    tcttAGACAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTtcatc                                                                >  1:1502100/1‑93 (MQ=255)

                     cttAGCCAGTATTTCACGGCGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTtcatca                                                               <  1:2289376/93‑1 (MQ=255)

                      ttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCAc                                                              >  1:2944753/1‑93 (MQ=255)

                      ttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCAc                                                              >  2:3017562/1‑93 (MQ=255)

                      ttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCAc                                                              >  2:5995220/1‑93 (MQ=255)

                      ttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCAc                                                              <  2:5603464/93‑1 (MQ=255)

                        aGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACtg                                                            >  2:428413/1‑93 (MQ=255)

                         gCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACtgt                                                           >  2:5923936/1‑93 (MQ=255)

                         gCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACtgt                                                           >  2:4360100/1‑93 (MQ=255)

                         gCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACtgt                                                           <  1:3301207/93‑1 (MQ=255)

                           cAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTgtgt                                                         >  2:4881409/1‑93 (MQ=255)

                             gTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGttt                                                       >  1:1084746/1‑93 (MQ=255)

                              tATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGtttt                                                      <  2:3441668/93‑1 (MQ=255)

                              tATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGtttt                                                      <  1:475724/93‑1 (MQ=255)

                               aTTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTg                                                     >  2:3845466/1‑93 (MQ=255)

                                tttCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGa                                                    >  2:3261596/1‑93 (MQ=255)

                                tttCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGa                                                    >  2:3475178/1‑93 (MQ=255)

                                  tCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGAtt                                                  <  2:4068204/93‑1 (MQ=255)

                                     cGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACa                                               <  1:3452664/93‑1 (MQ=255)

                                     cGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACa                                               <  1:360313/93‑1 (MQ=255)

                                       gggAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAgc                                             >  1:3372713/1‑93 (MQ=255)

                                       gggAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAgc                                             <  2:5088139/93‑1 (MQ=255)

                                        ggAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAgcg                                            <  2:3093408/93‑1 (MQ=255)

                                           gTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCgcgg                                         >  2:6657547/1‑93 (MQ=255)

                                              aTGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGa                                      <  1:5720089/93‑1 (MQ=255)

                                               tGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGAt                                     >  2:3499213/1‑93 (MQ=255)

                                                gCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGGCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATa                                    >  1:2096685/1‑93 (MQ=255)

                                                gCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATa                                    >  1:6697421/1‑93 (MQ=255)

                                                 ccTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATaa                                   >  1:634485/1‑93 (MQ=255)

                                                  cttcttTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAc                                  >  2:5270469/1‑93 (MQ=255)

                                                  cttcttTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAc                                  <  2:413310/93‑1 (MQ=255)

                                                  cttcttTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAc                                  >  1:4419308/1‑93 (MQ=255)

                                                  cttcttTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAc                                  >  2:2243493/1‑93 (MQ=255)

                                                   ttcttTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACa                                 <  2:6176378/93‑1 (MQ=255)

                                                   ttcttTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACa                                 >  1:5194591/1‑93 (MQ=255)

                                                   ttcttTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACa                                 <  1:1263838/93‑1 (MQ=255)

                                                    tcttTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACac                                >  1:3101463/1‑92 (MQ=255)

                                                    tcttTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAg                                >  2:4904823/1‑93 (MQ=255)

                                                     cttTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGc                               <  1:5000507/93‑1 (MQ=255)

                                                       ttACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCct                             <  2:1645746/93‑1 (MQ=255)

                                                         aCCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctgc                           >  1:203943/1‑93 (MQ=255)

                                                          ccATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctgct                          <  2:1233919/93‑1 (MQ=255)

                                                          ccATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctgct                          >  2:356080/1‑93 (MQ=255)

                                                             tttCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGtt                       <  1:65745/93‑1 (MQ=255)

                                                             tttCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGtt                       >  1:1796753/1‑93 (MQ=255)

                                                              ttCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTc                      >  2:5428363/1‑93 (MQ=255)

                                                                  gTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATc                  >  1:1713920/1‑93 (MQ=255)

                                                                  gTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATc                  <  2:5953306/93‑1 (MQ=255)

                                                                    aaGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAg                >  2:7911/1‑93 (MQ=255)

                                                                    aaGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAg                >  2:4540735/1‑93 (MQ=255)

                                                                    aaGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAg                >  2:1960923/1‑93 (MQ=255)

                                                                    aaGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAg                >  1:213387/1‑93 (MQ=255)

                                                                     agagAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGt               >  1:5871502/1‑93 (MQ=255)

                                                                     agagAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGt               <  2:1017086/93‑1 (MQ=255)

                                                                     agagAT‑AAAAAAGGCCGGA‑ACATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGt               <  2:1855211/93‑1 (MQ=255)

                                                                      gagaT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtt              <  1:5315309/93‑1 (MQ=255)

                                                                      gagaT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtt              >  1:1970562/1‑93 (MQ=255)

                                                                         gataaaaaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttc            >  2:4434570/4‑93 (MQ=255)

                                                                            aaaaaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgct         >  1:4729671/1‑93 (MQ=255)

                                                                            aaaaaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgct         <  1:3314708/93‑1 (MQ=255)

                                                                            aaaaaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgct         >  2:1309280/1‑93 (MQ=255)

                                                                             aaaaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgctt        >  1:5621140/1‑93 (MQ=255)

                                                                              aaaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgcttt       <  2:5506856/93‑1 (MQ=255)

                                                                              aaaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgcttt       <  1:1421911/93‑1 (MQ=255)

                                                                               aaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgctttc      <  1:6030055/93‑1 (MQ=255)

                                                                               aaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgctttc      <  1:3958196/93‑1 (MQ=255)

                                                                               aaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgctttc      <  1:2420935/93‑1 (MQ=255)

                                                                                aaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgctttcg     >  2:3760672/1‑93 (MQ=255)

                                                                                  ggCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTttcgctttcgct   <  1:6251307/93‑1 (MQ=255)

                                                                                  ggCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTttcgctttcgct   <  2:482556/93‑1 (MQ=255)

                                                                                   gCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTtcgctttcgctt  >  1:5032025/1‑93 (MQ=255)

                                                                                   gCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTtcgctttcgctt  >  1:4971261/1‑93 (MQ=255)

AGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAAGGCCGGATGCATGCTCCGGCCTTGCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTT  >  NC_000913/4478422‑4478599

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`