| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,478,527 | Δ1 bp | intergenic (+36/+23) | yjgN → / ← valS | hypothetical protein/valine tRNA synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,478,527 | 0 | G | . | 99.7% | 1320.5 / ‑2.9 | 284 | intergenic (+36/+23) | yjgN/valS | hypothetical protein/valine tRNA synthetase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base . (156/127); minor base T (0/1); total (156/128) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.51e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.31e-01 | |||||||||||
Only 100 of 289 total aligned reads displayed.
AGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAAGGCCGGATGCATGCTCCGGCCTTGCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCA > NC_000913/4478437‑4478614 | aGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGttt < 1:4135522/93‑1 (MQ=255)aGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGttt < 1:122477/93‑1 (MQ=255)aGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGttt < 2:1332139/93‑1 (MQ=255)aGGCTTCTGAGCCAGTATTTCACAGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCAGGCTCTGGCCTT‑CGttt < 1:2733886/93‑1 (MQ=255) gCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTtc < 2:4977992/93‑1 (MQ=255) ttcttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTtcat > 2:3481727/1‑93 (MQ=255) ttcttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTtcat < 2:2072951/93‑1 (MQ=255) tcttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTtcatc < 1:5704420/93‑1 (MQ=255) tcttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTtcatc < 1:1036076/93‑1 (MQ=255) tcttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATGTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTtcatc > 2:3572847/1‑93 (MQ=255) ttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCAc > 2:5995220/1‑93 (MQ=255) ttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCAc > 2:3015781/1‑93 (MQ=255) ttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCAc < 2:5603464/93‑1 (MQ=255) aGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACtg > 2:3523092/1‑93 (MQ=255) aGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACtg > 2:428413/1‑93 (MQ=255) gCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACtgt > 2:5923936/1‑93 (MQ=255) gCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACtgt > 2:4360100/1‑93 (MQ=255) gCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACtgt < 1:3301207/93‑1 (MQ=255) ccAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACtgtg < 2:6671862/93‑1 (MQ=255) cAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTgtgt > 1:6337608/1‑93 (MQ=255) cAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTgtgt < 1:5861922/93‑1 (MQ=255) cAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTgtgt < 1:1903547/93‑1 (MQ=255) cAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTgtgt > 2:4881409/1‑93 (MQ=255) gTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGttt < 2:2343501/93‑1 (MQ=255) gTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGttt > 2:3071518/1‑93 (MQ=255) gTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGttt > 2:4434157/1‑93 (MQ=255) gTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGttt > 1:1084746/1‑93 (MQ=255) tttCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGCA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGa > 1:2865647/1‑93 (MQ=255) tCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGAtt < 1:4247321/93‑1 (MQ=255) tCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGAtt < 1:2030674/93‑1 (MQ=255) tCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGAtt < 2:4068204/93‑1 (MQ=255) tCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGAtt < 1:2948694/93‑1 (MQ=255) cACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTa > 1:688865/1‑93 (MQ=255) aCGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTAc < 2:6574307/93‑1 (MQ=255) ggggAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAg > 2:3461802/1‑93 (MQ=255) ggggAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAg > 1:4999420/1‑93 (MQ=255) ggggAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAg > 2:5846959/1‑93 (MQ=255) gggAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAgc < 2:5088139/93‑1 (MQ=255) gAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAgcgc > 2:1722957/1‑93 (MQ=255) aGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGcgcg > 2:6459067/1‑93 (MQ=255) gTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCgcgg > 1:4194101/1‑93 (MQ=255) gTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCgcgg > 2:1877729/1‑93 (MQ=255) aTGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGG‑CTTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGa < 1:3380659/93‑1 (MQ=255) tGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGAt > 2:4557870/1‑93 (MQ=255) gCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGGCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATa > 1:2096685/1‑93 (MQ=255) cttcttTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAc > 2:2555870/1‑93 (MQ=255) cttcttTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAc > 2:1085273/1‑93 (MQ=255) cttcttTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAc < 2:413310/93‑1 (MQ=255) ttcttTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACa < 1:5924529/93‑1 (MQ=255) ttcttTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACa < 2:6176378/93‑1 (MQ=255) tcttTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACac > 1:3101463/1‑92 (MQ=255) tcttTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAg > 2:4904823/1‑93 (MQ=255) ttACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCct < 2:1645746/93‑1 (MQ=255) ttACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCct < 1:220153/93‑1 (MQ=255) tACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctg > 1:5025794/1‑93 (MQ=255) aCCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctgc < 1:3528107/93‑1 (MQ=255) ccATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctgct > 2:4513868/1‑93 (MQ=255) ccATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctgct > 2:3624294/1‑93 (MQ=255) tttCTGTAAGAGATAAAAAAA‑GCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGtt < 2:3152633/93‑1 (MQ=255) tttCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGtt > 1:5416540/1‑93 (MQ=255) tttCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGtt < 1:65745/93‑1 (MQ=255) ttCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTc > 2:5428363/1‑93 (MQ=255) tGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAAt < 2:4852822/93‑1 (MQ=255) gTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATc < 1:820719/93‑1 (MQ=255) gTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATc < 2:5953306/93‑1 (MQ=255) gTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATc > 1:2565911/1‑93 (MQ=255) tAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCa > 1:5251813/1‑93 (MQ=255) aaGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAg > 1:3742701/1‑93 (MQ=255) agagAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGt < 2:1017086/93‑1 (MQ=255) agagAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGt < 2:343737/93‑1 (MQ=255) agataaaaaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGttt > 2:3789550/5‑93 (MQ=255) agataaaaaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGttt < 2:3847904/89‑1 (MQ=255) agataaaaaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGttt < 1:1312826/89‑1 (MQ=255) gataaaaaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttc < 1:173304/90‑1 (MQ=255) taaaaaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgc > 2:1244494/2‑93 (MQ=255) taaaaaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgc < 1:1400080/92‑1 (MQ=255) taaaaaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgc < 1:1488939/92‑1 (MQ=255) aaaaaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgct < 1:3314708/93‑1 (MQ=255) aaaaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgctt > 1:5621140/1‑93 (MQ=255) aaaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgcttt < 1:2297411/93‑1 (MQ=255) aaaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgcttt < 2:5506856/93‑1 (MQ=255) aaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgctttc < 1:2420935/93‑1 (MQ=255) aaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgctttc < 1:3958196/93‑1 (MQ=255) aaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgctttcg > 1:5071390/1‑93 (MQ=255) aaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgctttcg > 1:4749478/1‑93 (MQ=255) ggCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTttcgctttcgct < 2:3915897/93‑1 (MQ=255) gCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTtcgctttcgctt > 1:4460722/1‑93 (MQ=255) ggagcatgcTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCg < 1:4870199/90‑1 (MQ=255) ggagcatgcTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCg < 1:6467823/90‑1 (MQ=255) ggagcatgcTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCg < 2:838288/90‑1 (MQ=255) gagcatgcTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGc > 1:3353016/3‑93 (MQ=255) gcatgcTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCAt < 1:4399670/93‑1 (MQ=255) tgcTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGc > 2:5225759/1‑93 (MQ=255) tgcTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGc > 1:1539915/1‑93 (MQ=255) tgcTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGc < 2:2376249/93‑1 (MQ=255) gcTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGcc < 1:1865454/93‑1 (MQ=255) tctggCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCtt > 2:1552869/4‑93 (MQ=255) tggCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTcc < 1:6229044/92‑1 (MQ=255) ggCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCa < 1:5151359/93‑1 (MQ=255) ggCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCa < 2:783452/93‑1 (MQ=255) | AGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAAGGCCGGATGCATGCTCCGGCCTTGCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCA > NC_000913/4478437‑4478614 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |