BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	722,751	(T)_8→7	coding (887/2685 nt)	kdpD ←	KdpD

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	722,744	0	T	.	99.4%	736.6 / ‑3.4	162	coding (894/2685 nt)	kdpD	KdpD
Reads supporting (aligned to +/- strand): ref base T (1/0); new base . (81/80); total (82/80)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 202 total aligned reads displayed.

ACTACCGCTTTCTCTTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACGTTTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCAGCCGCGCCGCT  >  NC_000913/722652‑722831

aCTACCGCTTTCTCTTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACGt                                                                                         >  1:1492695/1‑93 (MQ=255)

aCTACCGCTTTCTCTTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACGt                                                                                         <  2:4592539/93‑1 (MQ=255)

aCTACCGCTTTCTCTTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACGt                                                                                         <  1:4290349/93‑1 (MQ=255)

 ctcccGCTTGCTCTTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACGtt                                                                                        <  1:2766755/90‑1 (MQ=255)

  tACCGCTTTCTCTTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACGttt                                                                                       >  2:6543737/1‑93 (MQ=255)

   tccGCTTTCTCTTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACGtttt                                                                                      <  2:2048937/92‑1 (MQ=255)

   aCCGCTTTCTCTTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACGtttt                                                                                      <  2:5413832/93‑1 (MQ=255)

     cGCTTTCTCTTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACGtttttt                                                                                    <  2:2610172/93‑1 (MQ=255)

     cGCTTTCTCTTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACGtttttt                                                                                    <  2:4990390/93‑1 (MQ=255)

      gCTTTCTCTTCCGCTGGATCAGAAAGCGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTCAGCCGCTGAGAATTGCCCGACGttttttt                                                                                   >  1:6099908/1‑93 (MQ=255)

       cTTTCTCTTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACGtttttttc                                                                                  <  1:5735931/93‑2 (MQ=255)

        tttCTCTTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACGtttttttcg                                                                                 >  1:5426873/1‑91 (MQ=255)

        tttCTCTTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACGtttttttcc                                                                                 >  1:2981311/1‑91 (MQ=255)

        tttCTCTTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACGtttttttcc                                                                                 <  1:4733066/93‑3 (MQ=255)

         ttCTCTTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACGtttttttccg                                                                                <  1:2002684/93‑4 (MQ=255)

          tctcTTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACGtttttttccgg                                                                               >  2:4649662/1‑89 (MQ=255)

          tctcTTCCGCCGGATCAGAAAGTGTTGCCGTCCCCGCGCCCAGTTCCTGCCCCAGACGTAAGGCGCTGAGAATTGCCCGACGtttttttccgg                                                                               <  2:2645956/93‑5 (MQ=255)

           ctctTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGt                                                                             >  2:6114608/1‑93 (MQ=255)

           ctctTCCGCGGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGAGGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGt                                                                             <  2:2122168/93‑1 (MQ=255)

            tctTCCGCTGGATCAGAAAGTTTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTa                                                                            <  2:4577184/93‑1 (MQ=255)

            tctTCCGCTGGATCAGAAAGTGTTGCCGTCTCCCCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTa                                                                            >  1:861652/1‑93 (MQ=255)

              ttCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAg                                                                          <  2:1520292/93‑1 (MQ=255)

              ttCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAg                                                                          <  2:1098605/93‑1 (MQ=255)

              ttCCGCTGGATCAGAAAGTGTTGCCGTCCCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAg                                                                          <  2:1915140/93‑1 (MQ=255)

               tCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGc                                                                         <  2:2800977/93‑1 (MQ=255)

                ccGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCg                                                                        <  1:966575/93‑1 (MQ=255)

                ccGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCg                                                                        >  2:5779909/1‑93 (MQ=255)

                 cGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCgg                                                                       <  2:4710702/93‑1 (MQ=255)

                 cGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCgg                                                                       <  2:5671079/93‑1 (MQ=255)

                 cGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCACAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCgg                                                                       <  1:1013829/93‑1 (MQ=255)

                  gCTGGATCAAAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGt                                                                      <  2:1178388/93‑1 (MQ=255)

                   cTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTg                                                                     >  2:2398788/1‑93 (MQ=255)

                   cTGGATCAGAAAGTGTTGCCGCCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTg                                                                     <  1:5630009/93‑1 (MQ=255)

                     ggATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTgca                                                                   <  1:2272398/93‑1 (MQ=255)

                     ggATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTgca                                                                   >  1:3327775/1‑93 (MQ=255)

                      gATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTgcag                                                                  >  2:896365/1‑93 (MQ=255)

                        tCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTgcaggg                                                                >  1:2122932/1‑93 (MQ=255)

                         cAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTgcagggc                                                               <  2:2785791/93‑1 (MQ=255)

                          aGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTgcagggca                                                              >  1:1193473/1‑93 (MQ=255)

                          aGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTgcagggca                                                              <  2:2934837/93‑1 (MQ=255)

                          aGAAAGTGTTGCCGCCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTgcagggca                                                              <  2:5482921/93‑1 (MQ=255)

                           gAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTgcagggcag                                                             <  2:6000477/93‑1 (MQ=255)

                            aaaGTGTTTCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTgcagggcagg                                                            <  2:2838680/93‑1 (MQ=255)

                            aaaGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTgcagggcagg                                                            >  1:5979774/1‑93 (MQ=255)

                            aaaGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTgcagggcagg                                                            <  2:3015164/93‑1 (MQ=255)

                             aaGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGcagggcaggg                                                           >  2:4151248/1‑93 (MQ=255)

                              aGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAgggg                                                          >  2:6052835/1‑93 (MQ=255)

                              aGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAgggg                                                          >  2:4244859/1‑93 (MQ=255)

                              aGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTCCCGGTAAGCGGTGCAGGGCAgggg                                                          >  1:5093205/1‑93 (MQ=255)

                               gtgtTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGt                                                         <  2:344161/93‑1 (MQ=255)

                               gtgtTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGt                                                         >  1:1957803/1‑93 (MQ=255)

                               gtgtTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGt                                                         >  1:2899255/1‑93 (MQ=255)

                               gtgtTGCCGTCTCCGCGCCAAGTTCCGGCGCCAGACGTAAGGCTCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGt                                                         <  1:3614925/93‑1 (MQ=255)

                                    gCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCaa                                                    >  2:973195/1‑93 (MQ=255)

                                      cGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACa                                                  >  1:1166283/1‑93 (MQ=255)

                                       gTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACAt                                                 <  2:5863739/93‑1 (MQ=255)

                                          tcCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATaca                                              >  2:1762355/1‑93 (MQ=255)

                                          tcCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATaca                                              >  2:3736031/1‑93 (MQ=255)

                                           ccGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATacac                                             >  1:2667663/1‑93 (MQ=255)

                                               gcCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACcgcg                                         >  2:5191934/1‑93 (MQ=255)

                                                cccAGTTCCTGCGCCAGACGTGAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGt                                        <  1:5863439/93‑1 (MQ=255)

                                                cccAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGt                                        >  1:1864177/1‑93 (MQ=255)

                                                 ccAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTg                                       >  2:3901434/1‑93 (MQ=255)

                                                   aGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGcc                                     <  2:747955/93‑1 (MQ=255)

                                                   aGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGcc                                     >  2:4006021/1‑93 (MQ=255)

                                                   aGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGcc                                     <  2:2254882/93‑1 (MQ=255)

                                                   aGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGcc                                     <  2:5306550/93‑1 (MQ=255)

                                                    gTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCa                                    >  2:1321842/1‑93 (MQ=255)

                                                    gTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCa                                    >  2:4368003/1‑93 (MQ=255)

                                                     ttCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAg                                   >  1:1364362/1‑93 (MQ=255)

                                                       ccTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGGCG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGAc                                 <  2:4289400/93‑1 (MQ=255)

                                                       ccTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGAc                                 >  1:6422688/1‑93 (MQ=255)

                                                       ccTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGAc                                 >  1:6027650/1‑93 (MQ=255)

                                                       ccTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGAc                                 <  1:3740847/93‑1 (MQ=255)

                                                         tGCGCCAGACGTAAGGCGCTTAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGc                               <  1:3205287/93‑1 (MQ=255)

                                                         tGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGc                               <  2:5282200/93‑1 (MQ=255)

                                                            gcCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTAc                            <  1:2069307/93‑1 (MQ=255)

                                                            ccgaGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTAc                            <  1:18773/90‑1 (MQ=255)

                                                               aGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCa                         <  1:4170509/93‑1 (MQ=255)

                                                                 aCGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTGCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGc                       >  1:1241645/1‑93 (MQ=255)

                                                                   gTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCg                     >  1:5563046/1‑93 (MQ=255)

                                                                    tAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGt                    >  1:774731/1‑93 (MQ=255)

                                                                    tAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGt                    >  1:4860898/1‑93 (MQ=255)

                                                                    tAAGGCGCTGAGAATTGCCCGACG‑TTTTTTCCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGt                    <  1:1712933/93‑1 (MQ=255)

                                                                     aaGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTg                   <  1:4426455/93‑1 (MQ=255)

                                                                     aaGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTg                   >  1:5211919/1‑93 (MQ=255)

                                                                      aGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGa                  >  1:3149164/1‑93 (MQ=255)

                                                                      aGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGa                  >  2:2183727/1‑93 (MQ=255)

                                                                       ggCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGAc                 >  2:1041941/1‑93 (MQ=255)

                                                                          gcTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGcc              >  1:3971479/1‑93 (MQ=255)

                                                                             gagaATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCAgc           <  1:2022265/93‑1 (MQ=255)

                                                                             gagaATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCAgc           <  2:4497553/93‑1 (MQ=255)

                                                                              cgaATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCAgcc          <  2:6433819/92‑1 (MQ=255)

                                                                               gaATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCAgccg         >  1:2492436/1‑93 (MQ=255)

                                                                                 aTTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCAgccgcg       >  2:3119051/1‑93 (MQ=255)

                                                                                  ttGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCAgccgcgc      <  1:2083382/93‑1 (MQ=255)

                                                                                  ttGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCAgccgcgc      <  2:6495528/93‑1 (MQ=255)

                                                                                  ttGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCAgccgcgc      <  1:3250189/93‑1 (MQ=255)

                                                                                    gCCCGCCG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCAgccgcgccg    <  2:4881451/93‑1 (MQ=255)

                                                                                    gCCCGACG‑TTTTTTTCCGGTAAGCGGTGAAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCAgccgcgccg    <  2:6700313/93‑1 (MQ=255)

ACTACCGCTTTCTCTTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACGTTTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCAGCCGCGCCGCT  >  NC_000913/722652‑722831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`