BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	867,645	(C)_8→7	coding (870/1839 nt)	b0829 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	867,638	0	C	.	98.9%	813.8 / ‑0.5	181	coding (863/1839 nt)	b0829	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (2/0); new base . (93/86); total (95/86)
Fisher's exact test for biased strand distribution p-value = 4.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.08e-01

Only 100 of 217 total aligned reads displayed.

GTTAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTGCGCAGCGGT  >  NC_000913/867546‑867726

gTTAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGc                                                                                          <  2:2649383/93‑1 (MQ=255)

gTTAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGc                                                                                          >  1:1724142/1‑93 (MQ=255)

gTTAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAAGc                                                                                          >  1:5904406/1‑93 (MQ=255)

 ttAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGcc                                                                                         >  2:6001596/1‑93 (MQ=255)

  tAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCTCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGccc                                                                                        <  2:6391771/93‑1 (MQ=255)

  tAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGccc                                                                                        >  1:2991258/1‑93 (MQ=255)

   aGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGcccc                                                                                       <  1:6097682/93‑1 (MQ=255)

    gctgctGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGccccc                                                                                      >  1:6383835/1‑93 (MQ=255)

    gctgctGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGccccc                                                                                      >  2:1389287/1‑93 (MQ=255)

    gctgctGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGccccc                                                                                      >  1:3737006/1‑93 (MQ=255)

     ctgctgTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGcccccc                                                                                     >  1:2315205/1‑93 (MQ=255)

         tgTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGcccccccatc                                                                                 >  1:1359147/1‑90 (MQ=255)

          gTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGcccccccatcg                                                                                >  2:4785845/1‑89 (MQ=255)

          gTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGcccccccatcg                                                                                <  1:5275185/93‑5 (MQ=255)

           ttCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGa                                                                              <  1:3169589/93‑1 (MQ=255)

                 aaCTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGaa                                                                        >  1:2580306/1‑93 (MQ=255)

                  aCTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGaaa                                                                       >  2:1135639/1‑93 (MQ=255)

                  aCTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGaaa                                                                       >  1:540980/1‑93 (MQ=255)

                  aCTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGaaa                                                                       >  1:1477718/1‑93 (MQ=255)

                   cTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGaaaa                                                                      <  2:5641185/93‑1 (MQ=255)

                   cTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGaaaa                                                                      <  1:3978142/93‑1 (MQ=255)

                   cTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGaaaa                                                                      <  2:256525/93‑1 (MQ=255)

                    ttGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCC‑TCGAGCAGaaaaa                                                                     >  1:574853/1‑92 (MQ=255)

                    ttGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAAc                                                                     >  2:6318925/1‑93 (MQ=255)

                      ggTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACgg                                                                   <  1:3921850/93‑1 (MQ=255)

                       gTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAATACggt                                                                  <  1:4342259/93‑1 (MQ=255)

                        tGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACggtg                                                                 <  2:1338769/93‑1 (MQ=255)

                         gCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACggtgg                                                                <  2:2450805/93‑1 (MQ=255)

                               aaaGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATg                                                          <  2:5501622/93‑1 (MQ=255)

                                aaGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATgg                                                         >  1:3479068/1‑93 (MQ=255)

                                aaGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGGGGATgg                                                         >  1:727182/1‑93 (MQ=255)

                                  gggTTAGATTATCCCCTACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCg                                                       >  2:2364462/1‑93 (MQ=255)

                                  gggTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑GCCCCCCATCGAGCAGAACACGTCGGTGGATGGCg                                                       >  1:531904/1‑93 (MQ=255)

                                  gggTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCg                                                       >  2:6624910/1‑93 (MQ=255)

                                  gggTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCg                                                       >  1:5646159/1‑93 (MQ=255)

                                   ggTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGGAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGa                                                      >  2:2704989/1‑93 (MQ=255)

                                   ggTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGa                                                      >  2:6223509/1‑93 (MQ=255)

                                    gTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGaa                                                     >  2:2961102/1‑93 (MQ=255)

                                    gTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGaa                                                     <  1:5460569/93‑1 (MQ=255)

                                      tAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAAcc                                                   >  1:6164143/1‑93 (MQ=255)

                                       aGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGGACCt                                                  >  2:1979160/1‑93 (MQ=255)

                                       aGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCt                                                  <  2:5866933/93‑1 (MQ=255)

                                        gATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTg                                                 >  1:3770661/1‑93 (MQ=255)

                                        aaTTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTg                                                 <  2:4140428/92‑1 (MQ=255)

                                         aTTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGt                                                <  2:4611522/93‑1 (MQ=255)

                                            aTCCCGGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGtttt                                             <  1:1952505/93‑1 (MQ=255)

                                            aTCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGtttt                                             <  2:4751937/93‑1 (MQ=255)

                                            aTCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGtttt                                             <  1:1608760/93‑1 (MQ=255)

                                            aTCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGtttt                                             >  2:3953325/1‑93 (MQ=255)

                                            aTCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGtttt                                             <  1:2369799/93‑1 (MQ=255)

                                             tCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTa                                            >  2:2796371/1‑93 (MQ=255)

                                              ccccGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTAc                                           <  2:1120955/93‑1 (MQ=255)

                                                ccGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGa                                         <  1:3325506/93‑1 (MQ=255)

                                                ccGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGGGGTGGATGGCGAACCTGTTTTACGa                                         >  2:4075139/1‑93 (MQ=255)

                                                 cGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCTAGCAGAAAACGGCGGTGGATGGCGAAACTGTTTTACGAg                                        >  1:215514/1‑93 (MQ=255)

                                                 cGACGTTTCCCGTTGATATCGCTTGAACATCCAGAGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACAAg                                        >  1:1442289/1‑93 (MQ=255)

                                                    cGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGc                                     >  2:5010466/1‑93 (MQ=255)

                                                    cGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGc                                     >  2:2254814/1‑93 (MQ=255)

                                                    cGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGc                                     <  1:2726690/93‑1 (MQ=255)

                                                     gTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCg                                    >  2:3496829/1‑93 (MQ=255)

                                                      tttCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGt                                   >  1:3397649/1‑93 (MQ=255)

                                                       ttCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTa                                  <  1:5994482/93‑1 (MQ=255)

                                                       ttCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTa                                  >  2:1198851/1‑93 (MQ=255)

                                                       ttCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTa                                  >  2:5749501/1‑93 (MQ=255)

                                                        tCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTaa                                 <  1:4540106/93‑1 (MQ=255)

                                                        tCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTaa                                 >  1:1136352/1‑93 (MQ=255)

                                                        tCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTaa                                 >  1:2283658/1‑93 (MQ=255)

                                                         cccGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAAt                                >  1:2239266/1‑93 (MQ=255)

                                                         cccGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAAt                                >  1:2790672/1‑93 (MQ=255)

                                                          ccGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATc                               <  2:1235402/93‑1 (MQ=255)

                                                           cGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCt                              <  1:4907841/93‑1 (MQ=255)

                                                            gtggATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACAGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCtt                             <  2:4819403/90‑1 (MQ=255)

                                                            gTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCtt                             >  2:1556809/1‑93 (MQ=255)

                                                            gTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGGAATCtt                             >  1:6411683/1‑93 (MQ=255)

                                                             ttGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTg                            >  1:5925432/1‑93 (MQ=255)

                                                              tGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGt                           >  1:6643630/1‑93 (MQ=255)

                                                              tGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGt                           <  2:4286842/93‑1 (MQ=255)

                                                              tGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGt                           >  1:2469925/1‑93 (MQ=255)

                                                                atatCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGGGGTATCTTGtta                         >  1:6000703/1‑91 (MQ=255)

                                                                 tatCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCAc                        >  1:3659082/1‑93 (MQ=255)

                                                                 tatCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCAc                        >  2:6442485/1‑93 (MQ=255)

                                                                 tatCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCAc                        >  1:6715548/1‑93 (MQ=255)

                                                                  atgtcTTGAACAACCAGCGAAACAGG‑CCCCCCCATCGAAAAGAAAGCGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCAcc                       <  1:4158005/89‑1 (MQ=255)

                                                                   tCGCTTGAACATCCAGGGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGGGGTGGATGGCGGACCTGTGTTACGACTGTGTAATCTTGTCAccc                      >  1:51885/1‑93 (MQ=255)

                                                                     gCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGt                    <  1:402522/93‑1 (MQ=255)

                                                                      cTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGtt                   <  2:1249157/93‑1 (MQ=255)

                                                                       ttGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGttt                  >  1:3612541/1‑93 (MQ=255)

                                                                         gAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTcc                >  2:4169419/1‑93 (MQ=255)

                                                                          aaCATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTccc               <  2:2617685/93‑1 (MQ=255)

                                                                           aCATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCt              <  1:5052472/93‑1 (MQ=255)

                                                                           aCATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCt              <  1:4948999/93‑1 (MQ=255)

                                                                           aCATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCt              <  2:362227/93‑1 (MQ=255)

                                                                            cATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCtt             <  2:1024533/93‑1 (MQ=255)

                                                                            cATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCtt             <  2:4725272/93‑1 (MQ=255)

                                                                              tCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTg           <  2:3731798/93‑1 (MQ=255)

                                                                               ccAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTgc          >  1:3003096/1‑93 (MQ=255)

                                                                                cAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTgcg         >  2:6678790/1‑93 (MQ=255)

                                                                                       aCAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTGCGCAGCGGt  <  2:4466827/93‑1 (MQ=255)

                                                                                       aCAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTGCGCAGCGGt  <  2:3299528/93‑1 (MQ=255)

                                                                                       aCAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTGCGCAGCGGt  >  2:3672990/1‑93 (MQ=255)

GTTAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTGCGCAGCGGT  >  NC_000913/867546‑867726

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`