BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,072,384	(C)_6→5	coding (2824/3120 nt)	b2000 →	outer membrane fluffing protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,072,379	0	C	.	100.0%	996.5 / NA	215	coding (2819/3120 nt)	b2000	outer membrane fluffing protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (102/113); total (102/113)

Only 100 of 234 total aligned reads displayed.

GTTCGGGCATGGCAGTGCACAACATGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTGCCCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCTTCTGTTATCCGCACCTTCAGCTCC  >  NC_000913/2072287‑2072467

 ttCGGGCATGGCAGTGCACAACATGTGCTTGCCGTTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTGcc                                                                                         <  2:1695303/93‑1 (MQ=255)

     ggCATGGCAGTGCACAACATGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGGACCTCATCCCGTGccccct                                                                                     >  2:4443808/1‑92 (MQ=255)

     ggCATGGCAGTGCACAACATGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTGccccct                                                                                     <  1:5752333/93‑2 (MQ=255)

      gCATGGCAGTGCACAACATGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTGccccctg                                                                                    <  2:801434/93‑3 (MQ=255)

         tGGCAGTGCACAACATGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGt                                                                                >  2:6588086/1‑93 (MQ=255)

         tGGCAGTGCACAACATGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGt                                                                                <  2:3648118/93‑1 (MQ=255)

         tGGCAGTGCACAACATGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGt                                                                                >  2:3755991/1‑93 (MQ=255)

          ggCAGTGCACAACATGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTg                                                                               >  2:3903811/1‑93 (MQ=255)

           gCAGTGCACAACATGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGa                                                                              >  2:760049/1‑93 (MQ=255)

           gCAGTGCACAACATGTGCGTGACGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGa                                                                              >  1:2795107/1‑93 (MQ=255)

            cAGTGCACAACATGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGAc                                                                             >  1:5111891/1‑93 (MQ=255)

             aGTGCACAACATGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACa                                                                            <  2:2414831/93‑1 (MQ=255)

              gggCACAACATGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACGTCATCCCGTG‑CCCCCTGCGTGACAg                                                                           >  2:6482204/3‑93 (MQ=255)

              gTGCACAACATGTGCGTGCCGTTTTCCGGCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAg                                                                           <  1:1020932/93‑1 (MQ=255)

              gTGCACAACATGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAg                                                                           <  1:2225751/93‑1 (MQ=255)

              gTGCACAACATGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAg                                                                           <  2:5779382/93‑1 (MQ=255)

              gTGCACAACATGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAg                                                                           >  1:6523165/1‑93 (MQ=255)

              gTGCAAAACATGTGCTTGCCGGTTTCCTTTGGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCTTGCGTGACAg                                                                           <  1:1757875/93‑1 (MQ=255)

               tGCACAACATGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGAGCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGt                                                                          <  2:6172569/93‑1 (MQ=255)

               tGCACAACATGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGt                                                                          <  1:94932/93‑1 (MQ=255)

                gCACAACATGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTg                                                                         >  2:3237823/1‑93 (MQ=255)

                  acaacaTGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCa                                                                       >  1:3654091/1‑93 (MQ=255)

                  acaacaTGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCa                                                                       >  1:6577028/1‑93 (MQ=255)

                  acaacaTGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCa                                                                       >  2:2133813/1‑93 (MQ=255)

                    aacaTGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCaaa                                                                     >  2:2966710/1‑93 (MQ=255)

                     acaTGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCaaaa                                                                    >  2:5271583/1‑93 (MQ=255)

                     acaTGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCaaaa                                                                    <  2:3133477/93‑1 (MQ=255)

                       aTGTGCGTGCCGGTTTCCGTCTGGGTAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAaca                                                                  <  1:4054003/93‑1 (MQ=255)

                             gtgcCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAgtgt                                                            <  1:3474287/93‑1 (MQ=255)

                              tgcCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGtgtg                                                           <  1:2149675/93‑1 (MQ=255)

                               gcCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTgtga                                                          >  1:2191436/1‑93 (MQ=255)

                                ccGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTgtgag                                                         <  2:5922906/93‑1 (MQ=255)

                                 cGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTgtgagt                                                        >  1:4765872/1‑93 (MQ=255)

                                   gTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTgtgagtga                                                      >  1:85056/1‑93 (MQ=255)

                                    tttCCGTCTGGGCAGCCACAACTATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGaa                                                     <  2:5015252/93‑1 (MQ=255)

                                    tttCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGaa                                                     <  1:1786581/93‑1 (MQ=255)

                                       ccGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTa                                                  <  1:1160450/93‑1 (MQ=255)

                                        cggcTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTAc                                                 <  2:481833/90‑1 (MQ=255)

                                        cGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTAc                                                 >  2:4368155/1‑93 (MQ=255)

                                         gTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTAcc                                                >  2:3839107/1‑93 (MQ=255)

                                          tCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCg                                               <  1:2315548/93‑1 (MQ=255)

                                          tCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCg                                               >  1:1416200/1‑93 (MQ=255)

                                             gggCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTg                                            >  1:6270394/1‑93 (MQ=255)

                                              ggCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGa                                           >  1:3384734/1‑93 (MQ=255)

                                              ggCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGa                                           <  2:282163/93‑1 (MQ=255)

                                                cAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAAc                                         <  1:4705520/93‑1 (MQ=255)

                                                cAGCCACAACGATATGACCTTTGGCGAACGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCCGTGAAc                                         <  1:5805249/93‑1 (MQ=255)

                                                  gCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACtg                                       >  2:3061626/1‑93 (MQ=255)

                                                   ccACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACtgg                                      <  1:3240189/93‑1 (MQ=255)

                                                   ccACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACtgg                                      >  1:3943123/1‑93 (MQ=255)

                                                    cacaACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACtggt                                     >  1:565597/1‑93 (MQ=255)

                                                    cacaACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACtggg                                     >  2:2107220/1‑92 (MQ=255)

                                                     acaACGATATGACCTTTGGCGAAGGCACTTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACtggtg                                    <  2:6445658/93‑1 (MQ=255)

                                                      caACGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACtggtgg                                   <  2:161685/93‑1 (MQ=255)

                                                       aaCGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTggg                                  >  1:4580887/1‑93 (MQ=255)

                                                        aCGATATGACCTTTGGCGAAGGCACCTCATCGCGTG‑GCCCCTGCGTGACAGTGCAAAAGACAGTGTGAGGGAATTACCGGTGAACTgggggga                                 >  2:1523462/1‑92 (MQ=255)

                                                        aCGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGt                                 <  1:2458212/93‑1 (MQ=255)

                                                        aCGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGt                                 <  1:3584449/93‑1 (MQ=255)

                                                        aCGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGt                                 >  1:3764237/1‑93 (MQ=255)

                                                        aCGATATGACCTTTGGCGAAGGCACCTCAGCCCGTG‑CCCCCTGCGTGACAGTGCAAAACCCAGTGTGAGTGAATTACCGGTGAACTGGTGGGt                                 <  1:1100055/93‑1 (MQ=255)

                                                         cGATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTa                                >  2:5887803/1‑93 (MQ=255)

                                                          gATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTAc                               >  2:1858040/1‑93 (MQ=255)

                                                          gATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTAc                               <  2:1043461/93‑1 (MQ=255)

                                                          gATATGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTAc                               >  2:1729055/1‑93 (MQ=255)

                                                            tatGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAg                             >  1:6407391/1‑93 (MQ=255)

                                                            tatGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAg                             >  1:6656565/1‑93 (MQ=255)

                                                              tGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGcc                           <  2:5188236/93‑1 (MQ=255)

                                                              tGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGcc                           >  1:775676/1‑93 (MQ=255)

                                                              tGACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGcc                           <  1:3037875/93‑1 (MQ=255)

                                                               gACCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCt                          >  2:6335175/1‑93 (MQ=255)

                                                                gccTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCtt                         <  2:2322546/92‑1 (MQ=255)

                                                                aCCTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCtt                         <  2:6626393/93‑1 (MQ=255)

                                                                 ccTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCTTc                        >  2:1396518/1‑93 (MQ=255)

                                                                 ccTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCTTc                        >  2:42296/1‑93 (MQ=255)

                                                                 ccTTTGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGACTTc                        >  1:1343473/1‑93 (MQ=255)

                                                                   tttGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCTTCTg                      >  2:3117116/1‑93 (MQ=255)

                                                                   tttGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCTTCTg                      >  2:3428952/1‑93 (MQ=255)

                                                                    ttGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCTTCTGt                     >  2:2570298/1‑93 (MQ=255)

                                                                     tGGCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCTTCTGtt                    <  2:5127516/93‑1 (MQ=255)

                                                                      ggCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCTTCTGTTa                   <  1:2972881/93‑1 (MQ=255)

                                                                       gCGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCTTCTGTTAt                  >  2:4114365/1‑93 (MQ=255)

                                                                        cGAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCTTCTGTTATc                 <  2:5496163/93‑1 (MQ=255)

                                                                         gAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCTTCTGTTATcc                >  1:4342923/1‑93 (MQ=255)

                                                                         gAAGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCTTCTGTTATcc                >  2:5604108/1‑93 (MQ=255)

                                                                          aaGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCTTCTGTTATCCg               >  1:5215155/1‑93 (MQ=255)

                                                                           aGGCACCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCTTCTGTTATCCGc              >  1:6091440/1‑93 (MQ=255)

                                                                               aCCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCTTCTGTTATCCGCACCt          <  1:2647810/93‑1 (MQ=255)

                                                                               aCCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCTTCTGTTATCCGCACCt          >  2:1102476/1‑93 (MQ=255)

                                                                               aCCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCTTCTGTTATCCGCACCt          >  2:5100972/1‑93 (MQ=255)

                                                                               aCCTCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCTTCTGTTATCCGCACCt          <  1:4371520/93‑1 (MQ=255)

                                                                                 ctaaTCCCGAG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGAGAATTACCGGTGAACTGGTGGGTACAGCCTTATGAAATCCGAACCTTc        <  1:6724475/90‑1 (MQ=255)

                                                                                  tCATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCTTCTGTTATCCGCACCTTCa       >  1:2909077/1‑93 (MQ=255)

                                                                                  ccATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCTTCTGTTATCCGCACCTTCa       <  1:5917684/92‑1 (MQ=255)

                                                                                   cATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTTGGTGAATTACCGGTGAACTGGTGGGTACAGCCTTCTGTTATCCGCACCTTCAg      <  1:6065071/93‑1 (MQ=255)

                                                                                   cATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCTTCTGTTATCCGCACCTTCAg      >  1:4991807/1‑93 (MQ=255)

                                                                                   cATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCTTCTGTTATCCGCACCTTCAg      <  1:916524/93‑1 (MQ=255)

                                                                                   cATCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCTTCTGTTATCCGCACCTTCAg      >  2:272770/1‑93 (MQ=255)

                                                                                    aTCCCGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCTTCTGTTATCCGCACCTTCAGc     <  1:1281001/93‑1 (MQ=255)

                                                                                      cccGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCTTCTGTTATCCGCACCTTCAGCTc   >  1:4183580/1‑93 (MQ=255)

                                                                                      cccGTG‑CCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCTTCTGTTATCCGCACCTTCAGCTc   <  2:1320774/93‑1 (MQ=255)

GTTCGGGCATGGCAGTGCACAACATGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTGCCCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCTTCTGTTATCCGCACCTTCAGCTCC  >  NC_000913/2072287‑2072467

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`