BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,284,989	(C)_5→4	coding (1932/2511 nt)	yejO ←	putative ATP‑binding component of a transport system

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,284,985	0	C	.	100.0%	1048.3 / NA	227	coding (1936/2511 nt)	yejO	putative ATP‑binding component of a transport system
Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (111/116); total (111/116)

Only 100 of 264 total aligned reads displayed.

ACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATT  >  NC_000913/2284893‑2285073

aCTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGc                                                                                          <  2:6218872/93‑1 (MQ=255)

 cTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGcc                                                                                         <  1:2078168/93‑1 (MQ=255)

     tCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGccccag                                                                                     <  1:4158412/93‑3 (MQ=255)

     tCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGccccag                                                                                     >  2:2201728/1‑91 (MQ=255)

     tCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGccccag                                                                                     <  2:3157354/93‑3 (MQ=255)

      cTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGccccagg                                                                                    <  1:6058649/93‑4 (MQ=255)

       ttGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGccccaggg                                                                                   <  1:6212728/93‑5 (MQ=255)

       ttGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGccccaggg                                                                                   >  1:3673298/1‑89 (MQ=255)

       ttGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGccccaggg                                                                                   >  1:2835302/1‑89 (MQ=255)

       ttGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGccccaggg                                                                                   <  1:5803030/93‑5 (MQ=255)

       ttGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGccccaggg                                                                                   <  2:4373592/93‑5 (MQ=255)

        tGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGt                                                                                 >  2:6708426/1‑93 (MQ=255)

        tGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGt                                                                                 <  1:1390348/93‑1 (MQ=255)

         gCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGta                                                                                >  1:5756593/1‑93 (MQ=255)

         gCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGta                                                                                >  2:2151388/1‑93 (MQ=255)

         gCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGta                                                                                >  2:5546521/1‑93 (MQ=255)

          ccATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGtat                                                                               <  2:3362144/93‑1 (MQ=255)

           cATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCGACCGGCATAAG‑CCCCAGGGtata                                                                              >  2:3436782/1‑93 (MQ=255)

           cATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGtata                                                                              >  1:2137497/1‑93 (MQ=255)

             tggatggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGc                                                                            >  2:6326616/1‑93 (MQ=255)

             tggatggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGc                                                                            >  1:6377293/1‑93 (MQ=255)

               gatggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTa                                                                          <  1:4682464/93‑1 (MQ=255)

                atggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTAt                                                                         <  2:2988213/93‑1 (MQ=255)

                 tggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATc                                                                        >  1:3594648/1‑93 (MQ=255)

                 tggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATc                                                                        <  2:5652458/93‑1 (MQ=255)

                 tggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATc                                                                        >  2:4535866/1‑93 (MQ=255)

                 tggTGTGGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATc                                                                        <  1:1834566/93‑1 (MQ=255)

                  ggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCg                                                                       <  1:3707686/93‑1 (MQ=255)

                   gtgtTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGa                                                                      >  1:4797762/1‑93 (MQ=255)

                   gtgtTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGa                                                                      <  1:6716423/93‑1 (MQ=255)

                   gtgtTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGCGTATAGCTATCGa                                                                      >  1:970816/1‑93 (MQ=255)

                    tgtTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGat                                                                     <  1:4259921/93‑1 (MQ=255)

                    tgtTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGat                                                                     >  1:1582452/1‑93 (MQ=255)

                    tgtTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGat                                                                     <  2:5386191/93‑1 (MQ=255)

                     gtTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGata                                                                    <  2:5054623/93‑1 (MQ=255)

                       tGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATAtt                                                                  >  1:5325150/1‑93 (MQ=255)

                        ggCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CACCAGGGTATAGCTATCGATATTa                                                                 <  2:3071470/93‑1 (MQ=255)

                            aaaCGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCtt                                                             >  2:153534/1‑93 (MQ=255)

                             aaCGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCttt                                                            <  1:4854831/93‑1 (MQ=255)

                             aaCGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCttt                                                            <  1:2707776/93‑1 (MQ=255)

                             aaCGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCttt                                                            >  1:224823/1‑93 (MQ=255)

                               cGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTgc                                                          <  2:2333118/93‑1 (MQ=255)

                                ggTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTgcc                                                         >  1:1060295/1‑93 (MQ=255)

                                ggTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTgcc                                                         >  1:3515460/1‑93 (MQ=255)

                                 gTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTgccg                                                        >  1:3894922/1‑93 (MQ=255)

                                 gTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTgccg                                                        >  1:5401825/1‑93 (MQ=255)

                                  tCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACGTTTgccgc                                                       >  1:3458933/1‑93 (MQ=255)

                                   taaCTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTgccgcc                                                      <  2:4762745/92‑1 (MQ=255)

                                    aaCTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGccgccg                                                     <  2:5212724/93‑1 (MQ=255)

                                    aaCTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGccgccg                                                     >  1:6491180/1‑93 (MQ=255)

                                     aCTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCcgccgc                                                    >  2:5737703/1‑93 (MQ=255)

                                       tttCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGa                                                  <  1:3744579/93‑1 (MQ=255)

                                           accaccCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCaa                                              <  1:31848/93‑1 (MQ=255)

                                            ccaccCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCaaa                                             >  1:5055475/1‑93 (MQ=255)

                                            ccaccCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCaaa                                             >  2:4117327/1‑93 (MQ=255)

                                             caccCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCaaaa                                            <  1:1897512/93‑1 (MQ=255)

                                              cccccATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAAc                                           <  1:430450/92‑1 (MQ=255)

                                               ccccATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAAcc                                          <  2:1316257/93‑1 (MQ=255)

                                               ccccATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAAcc                                          <  1:101202/93‑1 (MQ=255)

                                                  cATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCaaa                                       >  1:5562614/1‑92 (MQ=255)

                                                  cATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAat                                       >  1:1282757/1‑93 (MQ=255)

                                                   aTCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCTGCCGCGATCAAAACCAata                                      <  1:5551618/93‑1 (MQ=255)

                                                    tCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAatat                                     <  2:6059562/93‑1 (MQ=255)

                                                    tCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAatat                                     >  2:6675127/1‑93 (MQ=255)

                                                    tCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAatat                                     >  2:432821/1‑93 (MQ=255)

                                                    tCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAatat                                     <  1:6203870/93‑1 (MQ=255)

                                                     cAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATc                                    >  2:3699635/1‑93 (MQ=255)

                                                       aCATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAg                                  >  2:2723213/1‑93 (MQ=255)

                                                        cATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGa                                 <  1:2568805/93‑1 (MQ=255)

                                                         aTAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGaa                                <  2:5123572/93‑1 (MQ=255)

                                                          tAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAAt                               >  1:2899372/1‑93 (MQ=255)

                                                          tAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAAt                               >  2:3914087/1‑93 (MQ=255)

                                                          tAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAAt                               >  2:4947300/1‑93 (MQ=255)

                                                            ggCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATga                             <  1:1811449/93‑1 (MQ=255)

                                                             gCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATgag                            <  2:3949501/93‑1 (MQ=255)

                                                             gCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATgag                            >  1:3361345/1‑93 (MQ=255)

                                                              cACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATgaga                           <  2:3294596/93‑1 (MQ=255)

                                                              cACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATgaga                           >  1:4062774/1‑93 (MQ=255)

                                                               aCCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGagag                          <  2:5379993/93‑1 (MQ=255)

                                                               aCCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGagag                          >  2:838764/1‑93 (MQ=255)

                                                               aCCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGagag                          >  2:1889083/1‑93 (MQ=255)

                                                               aCCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGagag                          <  1:6612863/93‑1 (MQ=255)

                                                                ccGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGATTGAGAGt                         <  1:2759044/93‑1 (MQ=255)

                                                                ccGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGt                         <  2:3678537/93‑1 (MQ=255)

                                                                  gTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTaa                       <  2:4453949/93‑1 (MQ=255)

                                                                  gTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGAATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTaa                       >  2:4862141/1‑93 (MQ=255)

                                                                      tGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCaa                   >  2:1082823/1‑93 (MQ=255)

                                                                       gATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCaaa                  >  2:458352/1‑93 (MQ=255)

                                                                          gCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTCCCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGAt               <  2:2442111/93‑1 (MQ=255)

                                                                           cTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGTGTAACCAAAGATc              <  1:6437905/93‑1 (MQ=255)

                                                                             cccAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCaa            <  1:2452803/93‑1 (MQ=255)

                                                                             cacAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCaa            <  2:5933791/91‑1 (MQ=255)

                                                                                aaCCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGcc         >  1:777382/1‑93 (MQ=255)

                                                                                aaCCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGcc         >  2:2086748/1‑93 (MQ=255)

                                                                                   cGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTCGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCcgcg      <  2:1503356/93‑1 (MQ=255)

                                                                                     gCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGaa    <  2:5853817/93‑1 (MQ=255)

                                                                                     gCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGaa    >  2:1773201/1‑93 (MQ=255)

                                                                                      cATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAAt   <  2:1706137/93‑1 (MQ=255)

                                                                                      cATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAAt   <  2:3800747/93‑1 (MQ=255)

                                                                                       aTAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAAtt  <  2:6520444/93‑1 (MQ=255)

ACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATT  >  NC_000913/2284893‑2285073

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`