BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,816,555	(G)_5→6	coding (55/618 nt)	b3646 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,816,550	1	.	G	100.0%	774.4 / NA	238	T17R (ACG→AGG)	b3646	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (123/115); total (123/115)

Only 100 of 275 total aligned reads displayed.

CACAAATCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑GGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGT  >  NC_000913/3816458‑3816637

 acaAATCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑g                                                                                        >  1:2676265/1‑93 (MQ=255)

  caAATCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑gg                                                                                       >  2:6243441/1‑93 (MQ=255)

  caAATCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑gg                                                                                       <  1:5015926/93‑1 (MQ=255)

  caAATCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑gg                                                                                       <  2:916720/93‑1 (MQ=255)

   aaaTCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑ggg                                                                                      >  2:5444967/1‑93 (MQ=255)

    actCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑gggg                                                                                     <  2:3241986/91‑1 (MQ=255)

    aaTCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑gggg                                                                                     >  1:1034513/1‑93 (MQ=255)

    aaTCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑gggg                                                                                     >  1:6374714/1‑93 (MQ=255)

     aTCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑ggggg                                                                                    >  1:450347/1‑93 (MQ=255)

     aTCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑gggag                                                                                    >  1:3012005/1‑91 (MQ=255)

      tCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑gggggg                                                                                   <  1:3714623/93‑2 (MQ=255)

         cTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑ggggggcgc                                                                                <  2:2274703/93‑5 (MQ=255)

         cTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑ggggggcgc                                                                                <  1:3856035/93‑5 (MQ=255)

             ccTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTggc                                                                             >  2:288707/1‑93 (MQ=255)

             ccTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTggc                                                                             <  2:1073601/93‑1 (MQ=255)

                 ccAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGcc                                                                         >  2:4031684/1‑93 (MQ=255)

                     acagaTTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGgac                                                                     <  1:742272/93‑1 (MQ=255)

                       agaTTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGgacga                                                                   >  2:4814270/1‑93 (MQ=255)

                       agaTTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGgacga                                                                   >  1:2851588/1‑93 (MQ=255)

                       agaTTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGgacga                                                                   <  1:5480472/93‑1 (MQ=255)

                        gaTTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGgacgac                                                                  <  2:3531916/93‑1 (MQ=255)

                        gaTTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGgacgac                                                                  >  2:2103079/1‑93 (MQ=255)

                          tttttAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACgg                                                                >  2:1849714/1‑93 (MQ=255)

                          tttttAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACgg                                                                <  2:6524522/93‑1 (MQ=255)

                           ttttAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGgc                                                               <  2:1892874/93‑1 (MQ=255)

                              tAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCa                                                            >  1:3084825/1‑93 (MQ=255)

                               aGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCAt                                                           <  1:6578628/93‑1 (MQ=255)

                               aGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCAt                                                           <  1:5082173/93‑1 (MQ=255)

                               aGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCAt                                                           <  2:5806385/93‑1 (MQ=255)

                                gggAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATg                                                          <  2:1052969/93‑1 (MQ=255)

                                gggAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATg                                                          <  1:3896408/93‑1 (MQ=255)

                                 ggAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATgg                                                         <  1:1309209/93‑1 (MQ=255)

                                  gagagaACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGa                                                        >  2:4635716/1‑93 (MQ=255)

                                   agagaACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGAt                                                       >  1:6280674/1‑93 (MQ=255)

                                   agagaACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGAt                                                       >  1:6111094/1‑93 (MQ=255)

                                    gagaACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATa                                                      >  1:2229188/1‑93 (MQ=255)

                                    gagaACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATa                                                      >  2:1549310/1‑93 (MQ=255)

                                     agaACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATAc                                                     >  2:5081865/1‑93 (MQ=255)

                                      gaACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGGCGGCGCATGGATACa                                                    <  1:4295584/93‑1 (MQ=255)

                                      gaACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACa                                                    >  1:5685814/1‑93 (MQ=255)

                                      gaACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACa                                                    <  2:4142272/93‑1 (MQ=255)

                                        aCCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACAtt                                                  <  2:3019155/93‑1 (MQ=255)

                                        aCCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACAtt                                                  >  2:3133657/1‑93 (MQ=255)

                                        aCCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACAtt                                                  >  2:2639206/1‑93 (MQ=255)

                                        aCCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACAtt                                                  <  1:20869/93‑1 (MQ=255)

                                         ccATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACAttt                                                 >  1:1573963/1‑93 (MQ=255)

                                            tGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGc                                              >  2:5493651/1‑93 (MQ=255)

                                             gCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCg                                             <  1:4075058/93‑1 (MQ=255)

                                               tGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTa                                           >  2:3756309/1‑93 (MQ=255)

                                               tGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTa                                           <  2:770664/93‑1 (MQ=255)

                                                gTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTaa                                          >  2:1286891/1‑93 (MQ=255)

                                                gTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTaa                                          >  2:3944231/1‑93 (MQ=255)

                                                 ttACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAat                                         <  1:1650117/93‑1 (MQ=255)

                                                  tACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGACGGACGACGGCGCATGGATACATTTGGCGTAatt                                        >  1:5530055/1‑93 (MQ=255)

                                                     acaTTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAattatt                                     >  2:677481/1‑93 (MQ=255)

                                                      caTTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAattatta                                    <  1:581890/93‑1 (MQ=255)

                                                      caTTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAattatta                                    <  2:6413421/93‑1 (MQ=255)

                                                       aTTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAattattat                                   >  1:4316415/1‑93 (MQ=255)

                                                        ttttGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAattattatt                                  <  2:1689664/93‑1 (MQ=255)

                                                          ttGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGTTACATTTGGCGTAATTATTATTGc                                <  1:323973/93‑1 (MQ=255)

                                                           tGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCg                               >  2:5284944/1‑93 (MQ=255)

                                                           tGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCg                               >  2:4910772/1‑93 (MQ=255)

                                                             tATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGAc                             <  1:136871/93‑1 (MQ=255)

                                                             tATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTCGGCGTAATTATTATTGCGAc                             >  2:286571/1‑93 (MQ=255)

                                                                  ggttggCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCa                        >  2:3370602/1‑93 (MQ=255)

                                                                   gttggCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCAc                       <  1:3669493/93‑1 (MQ=255)

                                                                   gttggCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCAc                       <  1:3992651/93‑1 (MQ=255)

                                                                   gttggCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCAc                       >  2:254406/1‑93 (MQ=255)

                                                                     tggCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCg                     >  1:5891164/1‑93 (MQ=255)

                                                                     tggCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCg                     <  1:4652469/93‑1 (MQ=255)

                                                                     tggCATTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCg                     <  1:338542/93‑1 (MQ=255)

                                                                         aTTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAAt                 >  1:5320374/1‑93 (MQ=255)

                                                                         aTTACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAAt                 <  1:419838/93‑1 (MQ=255)

                                                                          ttACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGGGACCGCCACCGCAAtt                >  2:5219417/1‑93 (MQ=255)

                                                                          ttACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAAtt                >  2:4580996/1‑93 (MQ=255)

                                                                          ttACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAAtt                <  1:3346676/93‑1 (MQ=255)

                                                                          ttACTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAAtt                <  2:864815/93‑1 (MQ=255)

                                                                            aCTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTgg              >  1:5217947/1‑93 (MQ=255)

                                                                             cTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGc             >  2:3877384/1‑93 (MQ=255)

                                                                             cTGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGc             >  2:433030/1‑93 (MQ=255)

                                                                              tGCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCg            >  2:3469662/1‑93 (MQ=255)

                                                                               gCCGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCgg           >  1:112504/1‑93 (MQ=255)

                                                                                ccGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGa          <  2:5912442/93‑1 (MQ=255)

                                                                                 cGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAg         <  2:4388678/93‑1 (MQ=255)

                                                                                 cGAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAg         <  1:3155282/93‑1 (MQ=255)

                                                                                  gAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAgg        >  2:5882304/1‑93 (MQ=255)

                                                                                  gAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAgg        <  2:6374714/93‑1 (MQ=255)

                                                                                  gAAGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAgg        <  1:5178380/93‑1 (MQ=255)

                                                                                   aaGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAggg       <  1:447946/93‑1 (MQ=255)

                                                                                   aaGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAggg       >  1:357266/1‑93 (MQ=255)

                                                                                    aGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGt      >  2:514955/1‑93 (MQ=255)

                                                                                    aGCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGt      <  2:6324062/93‑1 (MQ=255)

                                                                                     gCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTc     <  2:4695630/93‑1 (MQ=255)

                                                                                     gCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTc     >  2:5565416/1‑93 (MQ=255)

                                                                                     gCCATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTc     <  2:5841210/93‑1 (MQ=255)

                                                                                      ccATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCa    <  1:834067/93‑1 (MQ=255)

                                                                                       cATGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAg   <  1:2519100/93‑1 (MQ=255)

                                                                                        aTGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCCGt  >  1:5614726/1‑93 (MQ=255)

                                                                                        aTGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGt  <  1:2706603/93‑1 (MQ=255)

                                                                                        aTGACGGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGt  <  2:1146533/93‑1 (MQ=255)

CACAAATCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑GGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGT  >  NC_000913/3816458‑3816637

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`