BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,951,166	+C	coding (35/1818 nt)	ilvD →	dihydroxyacid dehydratase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,951,166	1	.	C	100.0%	478.7 / NA	148	G12A (GGG→GCG)	ilvD	dihydroxyacid dehydratase
Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (20/128); total (20/128)

Only 100 of 180 total aligned reads displayed.

GACAGACACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑G‑GC‑C‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCAC  >  NC_000913/3951076‑3951248

gacagacaCTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGGTCGTGTGC‑‑G‑GT‑g‑‑g‑gg                                                                                     >  2:2738046/1‑92 (MQ=255)

gacagacaCTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑g‑‑gcg                                                                                      <  2:2452840/93‑3 (MQ=255)

 gcagacaCTGGGAGGAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCTCTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑g‑‑gcgc                                                                                     <  2:3325013/92‑4 (MQ=255)

 acagacaCTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑g‑‑gcgc                                                                                     <  2:635441/93‑4 (MQ=255)

  cagacaCTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGGTCGTGCGC‑‑T‑GT‑g‑‑gcgcg                                                                                    >  1:6589981/1‑89 (MQ=255)

           ggAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGaa                                                                         <  2:3820546/93‑1 (MQ=255)

           ggAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGaa                                                                         <  2:1083422/93‑1 (MQ=255)

           ggAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGaa                                                                         <  1:240898/93‑1 (MQ=255)

            gAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAAt                                                                        <  2:3875982/93‑1 (MQ=255)

            gAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAAt                                                                        <  2:3153998/93‑1 (MQ=255)

              gTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGa                                                                      <  2:2434953/93‑1 (MQ=255)

              gTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGa                                                                      <  2:6555121/93‑1 (MQ=255)

               gaaagaaagTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGAc                                                                     <  1:1709052/92‑1 (MQ=255)

                aaataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGAcc                                                                    <  2:4628277/93‑1 (MQ=255)

                 aataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGGTCCTGCGC‑‑C‑GTGG‑‑G‑GCGC‑‑CACCGGAATGagcc                                                                   >  2:2044961/1‑90 (MQ=255)

                 aataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGGGCGTGCGG‑‑T‑CT‑G‑‑GCGCGC‑‑CACCGGGAAGAccc                                                                   >  2:3373325/1‑92 (MQ=255)

                  ataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGa                                                                  <  1:6184684/93‑1 (MQ=255)

                  ataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGa                                                                  <  1:1215128/93‑1 (MQ=255)

                   taaaGTATGCCTAAGTACCGTCCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGAc                                                                 <  1:1244576/93‑1 (MQ=255)

                     aaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGc                                                               <  2:4029042/93‑1 (MQ=255)

                     aaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGc                                                               <  2:5138835/93‑1 (MQ=255)

                        tATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGa                                                            <  1:3384237/93‑1 (MQ=255)

                         aTGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGAt                                                           <  1:4115498/93‑1 (MQ=255)

                         aTGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGAt                                                           <  1:4957871/93‑1 (MQ=255)

                          tGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGAtt                                                          <  1:4813991/93‑1 (MQ=255)

                          tGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGGTCGTGGGCG‑TGGG‑G‑‑G‑GG‑C‑‑CCCCGGGATGACCGAccccccgt                                                          >  1:3688441/1‑89 (MQ=255)

                           gCCTAAGTCCCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGAttt                                                         <  2:1538339/93‑1 (MQ=255)

                           gCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGAttt                                                         <  1:1996955/93‑1 (MQ=255)

                           gCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGAttt                                                         <  2:1384910/93‑1 (MQ=255)

                           gCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCGTGCGC‑‑C‑GT‑G‑‑G‑GG‑CGGCCCCGGGATGACCGACGCCGAatt                                                         >  2:2950747/1‑93 (MQ=255)

                            ccTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTc                                                        <  1:4254882/93‑1 (MQ=255)

                             cTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCCTGCGCCGT‑GG‑G‑‑G‑GG‑C‑‑CACCGGGACGACCGGAGCCCAttttg                                                       >  1:1580375/1‑91 (MQ=255)

                              tAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCgg                                                      <  2:1131500/93‑1 (MQ=255)

                              tAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGGTCGTGGGC‑‑C‑GT‑G‑‑GCGCGG‑‑CCCCCGGATGAACGACGCCGATTTTgg                                                      >  2:3893347/1‑93 (MQ=255)

                              tAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCCCTCGCGC‑‑T‑GT‑G‑‑G‑GG‑CGGCACCGGGATGAACCACGCCGCttttcg                                                      >  2:5261798/1‑90 (MQ=255)

                               aaGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGt                                                     <  2:6311904/93‑1 (MQ=255)

                               aaGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGt                                                     <  1:117034/93‑1 (MQ=255)

                                aGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCCTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CCCCCGGATGACCGACCCCCATTTCGGTa                                                    >  1:4335024/1‑93 (MQ=255)

                                 gTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTaa                                                   <  1:325459/93‑1 (MQ=255)

                                   aCCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTTCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGc                                                 <  2:4323733/93‑1 (MQ=255)

                                   aCCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGc                                                 <  1:2129314/93‑1 (MQ=255)

                                    ccGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGGTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGcc                                                >  2:891628/1‑93 (MQ=255)

                                     cGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCg                                               <  1:1834611/93‑1 (MQ=255)

                                      gTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGa                                              <  2:966213/93‑1 (MQ=255)

                                      gTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGa                                              <  1:3767581/93‑1 (MQ=255)

                                        tCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGAtt                                            <  1:3393760/93‑1 (MQ=255)

                                        tCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCCTGCGC‑‑T‑GT‑GGCG‑GG‑C‑‑CACCGGGATGACCGACCCCGATTTTGGTAAGCCGAtt                                            >  2:5303637/1‑93 (MQ=255)

                                         ccGCCCCCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTa                                           <  1:4765262/93‑1 (MQ=255)

                                         ccGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTa                                           <  2:2572723/93‑1 (MQ=255)

                                          cGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTAt                                          <  2:359535/93‑1 (MQ=255)

                                          cGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTAt                                          <  2:2809676/93‑1 (MQ=255)

                                           gCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATc                                         <  2:441965/93‑1 (MQ=255)

                                            ccaccaccaCTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATcg                                        <  2:5373050/93‑1 (MQ=255)

                                              accaccacTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATcgcg                                      <  1:871837/93‑1 (MQ=255)

                                               ccaccacTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCgg                                     <  2:6509465/93‑1 (MQ=255)

                                               ccaccacTCATGGTCGTAATATGGCGGGGGGTCGTGGGC‑‑T‑GTGG‑‑G‑GCGC‑‑CCCCCGAATGACCGACGCCGGTTTCGGTAAACCGCTTATCGCgg                                     >  2:2170564/1‑93 (MQ=255)

                                                caccacTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGt                                    <  2:6272393/93‑1 (MQ=255)

                                                caccacTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGt                                    <  1:5315591/93‑1 (MQ=255)

                                                caccacTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGt                                    <  2:2872412/93‑1 (MQ=255)

                                                 accacTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGtt                                   <  2:1275088/93‑1 (MQ=255)

                                                  ccacTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTtg                                  <  1:6583098/93‑1 (MQ=255)

                                                      tCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGaa                              <  2:4939937/93‑1 (MQ=255)

                                                      tCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGaa                              <  2:925541/93‑1 (MQ=255)

                                                       cATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAAc                             <  2:4379342/93‑1 (MQ=255)

                                                         tGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTc                           <  1:6141833/93‑1 (MQ=255)

                                                         tGGTCGTAATATGGCGGGGGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAAAGACCGCCGCCCATTTTGGTGAACCGATTATCTCGGTTGTTAATTc                           >  2:5651575/1‑93 (MQ=255)

                                                          ggTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCg                          <  1:6314130/93‑1 (MQ=255)

                                                             cGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTc                       <  2:1351041/93‑1 (MQ=255)

                                                                aaTATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCAcc                    <  2:264134/93‑1 (MQ=255)

                                                                aaTATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCAcc                    <  1:5871944/93‑1 (MQ=255)

                                                                 atatGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCAccc                   <  2:1598616/93‑1 (MQ=255)

                                                                 atatGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCAccc                   <  1:6087854/93‑1 (MQ=255)

                                                                 atatGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCAccc                   <  1:2936786/93‑1 (MQ=255)

                                                                  tatGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCa                  >  1:2815758/1‑93 (MQ=255)

                                                                   atGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCaa                 <  1:5677088/93‑1 (MQ=255)

                                                                    tagCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAt                <  1:2977401/91‑1 (MQ=255)

                                                                    tGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAt                <  1:412701/93‑1 (MQ=255)

                                                                     ggCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAtt               >  1:3551067/1‑93 (MQ=255)

                                                                     ggCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAtt               <  2:5889370/93‑1 (MQ=255)

                                                                     ggCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAtt               >  2:4115316/1‑93 (MQ=255)

                                                                     ggCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAtt               >  1:309038/1‑93 (MQ=255)

                                                                     ggCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAtt               <  1:5674059/93‑1 (MQ=255)

                                                                      gCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAttt              >  1:6024145/1‑93 (MQ=255)

                                                                       cGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTg             <  2:4684720/93‑1 (MQ=255)

                                                                       cGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTg             <  1:4454294/93‑1 (MQ=255)

                                                                       cGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTg             <  2:2518194/93‑1 (MQ=255)

                                                                        gggTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCAC‑‑CACCAGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGt            <  2:6724649/93‑1 (MQ=255)

                                                                         ggTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTa           >  1:6295945/1‑93 (MQ=255)

                                                                          gTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTAc          <  1:6071005/93‑1 (MQ=255)

                                                                          gTGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTAc          <  2:4743828/93‑1 (MQ=255)

                                                                           tGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTAcc         >  2:770953/1‑93 (MQ=255)

                                                                           tGCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTAcc         <  1:780933/93‑1 (MQ=255)

                                                                            gCTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCg        >  1:5446204/1‑93 (MQ=255)

                                                                             cTCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCgg       <  2:5458768/93‑1 (MQ=255)

                                                                              tCGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCggg      <  2:490350/93‑1 (MQ=255)

                                                                               cGTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGt     <  2:4164355/93‑1 (MQ=255)

                                                                                gTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTc    >  1:1072727/1‑93 (MQ=255)

                                                                                gTGCGC‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTc    <  1:70904/93‑1 (MQ=255)

                                                                                  gcgc‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCAc  >  2:6418713/1‑93 (MQ=255)

                                                                                  gcgc‑‑T‑GT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCAc  <  1:930746/93‑1 (MQ=255)

GACAGACACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑T‑GT‑G‑‑G‑GC‑C‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCAC  >  NC_000913/3951076‑3951248

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`