Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,951,168 +G coding (37/1818 nt) ilvD → dihydroxyacid dehydratase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,951,1681.G99.3% 463.2 / NA 148P13A (CCC→GCC) ilvDdihydroxyacid dehydratase
Reads supporting (aligned to +/- strand):  ref base . (0/0);  major base G (20/126);  minor base A (0/1);  total (20/128)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 175 total aligned reads displayed.

GGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑G‑‑‑GCCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCACGTCCATCTGCGC  >  NC_000913/3951087‑3951260
                                                                                             |                                                                                            
ggAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGaa                                                                                     <  2:1083422/93‑1 (MQ=255)
ggAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGaa                                                                                     <  1:3655038/93‑1 (MQ=255)
ggAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGaa                                                                                     <  2:3820546/93‑1 (MQ=255)
 gAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAAt                                                                                    <  2:2388464/93‑1 (MQ=255)
 gAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAAt                                                                                    <  2:3153998/93‑1 (MQ=255)
  aGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATg                                                                                   <  2:6297596/93‑1 (MQ=255)
   gTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGa                                                                                  <  2:2434953/93‑1 (MQ=255)
   gTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGa                                                                                  <  2:6555121/93‑1 (MQ=255)
    taaataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGAc                                                                                 <  1:5236020/93‑1 (MQ=255)
      aataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGGGCGTGCGG‑‑TCT‑‑G‑‑GC‑‑GCGCCACCGGGAAGAccc                                                                               >  2:3373325/1‑92 (MQ=255)
       ataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGa                                                                              <  1:6184684/93‑1 (MQ=255)
       ataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGa                                                                              <  1:1215128/93‑1 (MQ=255)
        taaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGAc                                                                             <  2:4770457/93‑1 (MQ=255)
        taaaGTATGCCTAAGTACCGTCCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGAc                                                                             <  1:1244576/93‑1 (MQ=255)
          aaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGc                                                                           <  2:4029042/93‑1 (MQ=255)
            gTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATTGCGGGGGCTGCGGCGCGC‑‑TGG‑‑G‑‑G‑‑‑GGCGGCCGGGATGACCAAccgcc                                                                         >  1:4449198/1‑89 (MQ=255)
             tATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCGCGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGCCATGAGCCACGCCGa                                                                        >  2:2169780/1‑93 (MQ=255)
              aTGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGAt                                                                       <  1:4115498/93‑1 (MQ=255)
                gCCTAAGTCCCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGAttt                                                                     <  2:1538339/93‑1 (MQ=255)
                gCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGAttt                                                                     <  1:1996955/93‑1 (MQ=255)
                gCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGAttt                                                                     <  2:3047348/93‑1 (MQ=255)
                  cTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCg                                                                   <  2:5149983/93‑1 (MQ=255)
                  cTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCCTGCGCCGTGG‑‑G‑‑G‑‑‑GGCCACCGGGACGACCGGAGCCCAttttg                                                                   >  1:1580375/1‑91 (MQ=255)
                   tAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCgg                                                                  <  1:2680137/93‑1 (MQ=255)
                   tAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCgg                                                                  <  2:1131500/93‑1 (MQ=255)
                   tAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGGTCGTGGGC‑‑CGT‑‑G‑‑GC‑‑GCGGCCCCCGGATGAACGACGCCGATTTTgg                                                                  >  2:3893347/1‑93 (MQ=255)
                    aaGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGt                                                                 <  1:117034/93‑1 (MQ=255)
                     aGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGGTCGTGCGC‑‑TGTGG‑‑G‑‑‑GCGCCCCCCGGATGAACGACGCCGATTTTggga                                                                >  1:855508/1‑91 (MQ=255)
                      gTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGGTCGTGCGC‑‑TGTGGG‑‑G‑‑‑GGGCACCCGGATGAACGACGCCGCATTCGGGaa                                                               >  1:3728697/1‑93 (MQ=255)
                       tACCGTTCCGCCACCACCACTCATGGTCGTAATAGGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAg                                                              <  2:4639536/93‑1 (MQ=255)
                        aCCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGc                                                             <  1:2129314/93‑1 (MQ=255)
                        aCCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGGGCGC‑‑TGT‑‑G‑‑GCGCGCCCCCCGGAAGACCGACCCCGATCTCTGTGAGc                                                             >  2:1542430/1‑93 (MQ=255)
                         ccGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGGTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGcc                                                            >  2:891628/1‑93 (MQ=255)
                          cGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCg                                                           <  1:1834611/93‑1 (MQ=255)
                           gTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGa                                                          <  2:966213/93‑1 (MQ=255)
                            ttCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGGTCGTGCGC‑‑GGTGG‑‑G‑‑‑GCGCCACCGGAATGAGAGACGCCCACTTTGGTAAGGCggt                                                         >  1:328457/1‑91 (MQ=255)
                             tCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGAtt                                                        <  2:4342646/93‑1 (MQ=255)
                             tCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGAtt                                                        <  1:3393760/93‑1 (MQ=255)
                             tCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCCTGCGC‑‑TGT‑‑GGCG‑‑‑GGCCACCGGGATGACCGACCCCGATTTTGGTAAGCCGAtt                                                        >  2:5303637/1‑93 (MQ=255)
                              ccGCCCCCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTa                                                       <  1:4765262/93‑1 (MQ=255)
                              ccGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTa                                                       <  1:169021/93‑1 (MQ=255)
                              ccGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTa                                                       <  2:3859763/93‑1 (MQ=255)
                              ccGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTa                                                       <  2:2572723/93‑1 (MQ=255)
                               cGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTAt                                                      <  2:359535/93‑1 (MQ=255)
                               cGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCCGGATGATCGACGCCCCTTTTGGTAAAGCGATTAt                                                      >  1:6312560/1‑93 (MQ=255)
                                gCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATc                                                     <  2:5075743/93‑1 (MQ=255)
                                gCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATc                                                     <  2:1696188/93‑1 (MQ=255)
                                gCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATc                                                     <  1:3023419/93‑1 (MQ=255)
                                gCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATc                                                     <  2:441965/93‑1 (MQ=255)
                                gCCACCACCACTCATGGGCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATc                                                     <  1:3236227/93‑1 (MQ=255)
                                 ccaccaccaCTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATcg                                                    <  2:5373050/93‑1 (MQ=255)
                                 ccaccaccaCTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATcg                                                    <  1:4860282/93‑1 (MQ=255)
                                    ccaccacTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCgg                                                 <  1:5844436/93‑1 (MQ=255)
                                    ccaccacTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCgg                                                 <  2:6509465/93‑1 (MQ=255)
                                     caccacTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGt                                                <  1:5315591/93‑1 (MQ=255)
                                      accacTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGtt                                               <  1:4262934/93‑1 (MQ=255)
                                       ccacTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTtg                                              <  2:1240249/93‑1 (MQ=255)
                                       ccacTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTtg                                              <  1:6583098/93‑1 (MQ=255)
                                           tCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGaa                                          <  2:925541/93‑1 (MQ=255)
                                           tCATGGTCGTAATATGGCGGGGGCTCCTGGGC‑‑TGT‑‑G‑‑GGCGCCCACCGGGAAAACCGCCGCCCCATTTGGTTAGCCCATTATTGCGGGtgtgga                                          >  2:2652725/1‑91 (MQ=255)
                                            cATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAAc                                         <  1:928348/93‑1 (MQ=255)
                                            cATGGGCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCGCCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAAc                                         <  1:3458349/93‑1 (MQ=255)
                                             aTGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGACGATTTCGGTAAGCCGATTATCGCGGTTGTGAACt                                        <  2:4625082/93‑1 (MQ=255)
                                              tGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTc                                       <  1:6141833/93‑1 (MQ=255)
                                               ggTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCg                                      <  1:6314130/93‑1 (MQ=255)
                                               ggTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCg                                      <  1:239844/93‑1 (MQ=255)
                                                     aaTATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCAcc                                <  2:264134/93‑1 (MQ=255)
                                                     aaTATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCAcc                                <  1:5871944/93‑1 (MQ=255)
                                                      atatGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCAccc                               <  1:2936786/93‑1 (MQ=255)
                                                      atatGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCAccc                               <  2:4229485/93‑1 (MQ=255)
                                                       tatGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCa                              <  2:5568397/93‑1 (MQ=255)
                                                         tagCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAt                            <  1:2977401/91‑1 (MQ=255)
                                                          ggCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAtt                           <  2:5889370/93‑1 (MQ=255)
                                                          ggCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAtt                           >  1:6120113/1‑93 (MQ=255)
                                                          ggCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAtt                           >  2:4115316/1‑93 (MQ=255)
                                                          ggCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAtt                           <  1:5674059/93‑1 (MQ=255)
                                                          ggCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAtt                           <  2:2852794/93‑1 (MQ=255)
                                                          ggCGGGTGCTCGGGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAtt                           >  1:4201721/1‑93 (MQ=255)
                                                           gCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAttt                          <  2:1344667/93‑1 (MQ=255)
                                                           gCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAttt                          >  1:6024145/1‑93 (MQ=255)
                                                            cGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTg                         <  2:2518194/93‑1 (MQ=255)
                                                            cGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTg                         <  1:4454294/93‑1 (MQ=255)
                                                            cGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTg                         <  2:2901298/93‑1 (MQ=255)
                                                             gggTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGt                        >  2:870455/1‑93 (MQ=255)
                                                             gggTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCACCACCAGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGt                        <  2:6724649/93‑1 (MQ=255)
                                                               gTGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTAc                      <  1:6071005/93‑1 (MQ=255)
                                                                tGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTAcc                     <  2:6449871/93‑1 (MQ=255)
                                                                tGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTAcc                     <  2:5986742/93‑1 (MQ=255)
                                                                tGCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTAcc                     <  1:780933/93‑1 (MQ=255)
                                                                 gCTCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCg                    >  1:5446204/1‑93 (MQ=255)
                                                                  gtCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCgg                   <  2:6415997/92‑1 (MQ=255)
                                                                   tCGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCggg                  <  2:490350/93‑1 (MQ=255)
                                                                     cGTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGt                 <  2:474034/93‑1 (MQ=255)
                                                                       gTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTc                <  1:70904/93‑1 (MQ=255)
                                                                       gTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTc                >  2:5296032/1‑93 (MQ=255)
                                                                       gTGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTc                >  1:1072727/1‑93 (MQ=255)
                                                                        tGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCa               >  2:4121821/1‑93 (MQ=255)
                                                                        tGCGC‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCa               >  1:3983822/1‑93 (MQ=255)
                                                                         gcgc‑‑TGT‑‑G‑‑GC‑‑GCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCAc              <  2:1351379/93‑1 (MQ=255)
                                                                                            cccACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCACGTCCATCTgcgc  <  1:627606/93‑1 (MQ=255)
                                                                                             |                                                                                            
GGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGC‑‑TGT‑‑G‑‑G‑‑‑GCCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCACGTCCATCTGCGC  >  NC_000913/3951087‑3951260

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: