| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,957,124 | +G | intergenic (+58/+26) | ilvC → / ← ppiC | ketol‑acid reductoisomerase/peptidyl‑prolyl cis‑trans isomerase C |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,957,123 | 1 | . | G | 99.5% | 560.6 / ‑3.9 | 193 | intergenic (+57/+27) | ilvC/ppiC | ketol‑acid reductoisomerase/peptidyl‑prolyl cis‑trans isomerase C |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base G (57/135); total (57/136) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.14e-01 | |||||||||||
Only 100 of 215 total aligned reads displayed.
GACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑CTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AA‑GCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTC > NC_000913/3957033‑3957210 | gACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑aa < 1:1234982/93‑1 (MQ=21) aCAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AA‑g < 2:3986971/93‑1 (MQ=21) gATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCTCCCCG‑‑A‑‑CGCCCCGCCACCGGGGGGGGGAGAAAAAAGTC‑aaaggt > 1:2194852/1‑89 (MQ=19) gATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AA‑ggcc < 2:159579/93‑4 (MQ=21) atGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTtc < 2:3205417/93‑1 (MQ=18) atGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTtc < 2:3582724/93‑1 (MQ=18) tGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTtct < 1:1399921/93‑1 (MQ=18) tGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTtct < 2:6393684/93‑1 (MQ=18) aaaCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTcc < 2:5252362/93‑1 (MQ=18) aaaCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTcc < 2:3111185/93‑1 (MQ=18) aaaCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTcc < 1:4713500/93‑1 (MQ=18) accGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAACCACTC‑AAGGCCTTCTCCt < 2:2097799/91‑1 (MQ=18) aaCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCt < 1:5491200/93‑1 (MQ=18) aCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTcccg < 1:4200575/93‑3 (MQ=18) aCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTg < 2:2917926/93‑1 (MQ=18) gTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGga < 2:1357909/93‑1 (MQ=18) gTATTGCTGTTGCGGGTTAAGTGCGCGCTAATGCCCTCACCCCGCCC‑‑CCCTC‑‑CGACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGga < 1:5770991/93‑1 (MQ=18) tATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCCCCCCCCC‑‑ACCCCCTC‑‑CCCCAAGGGGAGGGGGGAAACACACAAA‑GCCCTTTCCTGgag > 2:895300/1‑93 (MQ=255) tGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAg < 2:6287635/93‑1 (MQ=18) gCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAgg < 2:4312446/93‑1 (MQ=18) gCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAgg < 1:4670290/93‑1 (MQ=18) cTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGc < 1:924883/93‑1 (MQ=18) cTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGc < 2:478780/93‑1 (MQ=18) tGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGcc < 2:3651621/93‑1 (MQ=18) tGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGcc < 1:3762353/93‑1 (MQ=18) tGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGcc < 2:3736528/93‑1 (MQ=18) tGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGcc < 1:1875019/93‑1 (MQ=18) tGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGcc < 2:4064021/93‑1 (MQ=18) gTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCt < 1:5193645/93‑1 (MQ=18) gTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCt < 2:3400166/93‑1 (MQ=18) tGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCC‑‑ACCCTCTC‑‑CCACAAGGAGGGGGAGAAAACAATCAAA‑AGCTTCTCCTGGAGAAGGGCTTg > 2:3372738/1‑93 (MQ=12) gCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGc < 1:2259281/93‑1 (MQ=18) gCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGc < 2:2292245/93‑1 (MQ=18) tAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAg < 1:6448866/93‑1 (MQ=18) aGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGtt < 2:5415298/93‑1 (MQ=18) gTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTg < 1:2005227/93‑1 (MQ=18) gcgcgcTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCg < 2:459268/93‑1 (MQ=21) gcgcgcTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCg < 2:5802428/93‑1 (MQ=21) gcgcTGATGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGt < 2:5975865/93‑1 (MQ=21) aTGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCa < 1:2371185/93‑1 (MQ=25) tGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCAc < 1:440387/93‑1 (MQ=25) tGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCAc < 2:6625785/93‑1 (MQ=25) tGCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCAc < 2:842131/93‑1 (MQ=25) gCCCTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCAcc < 1:1713963/93‑1 (MQ=25) acccTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCAcc < 1:5117258/92‑1 (MQ=25) cccTCCCCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGCCCTTGCTATTAGTTGCGGTACAGCACCt < 1:3005216/93‑1 (MQ=25) cccTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCt < 1:4283001/93‑1 (MQ=25) ccTCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCtt < 1:269359/93‑1 (MQ=25) tCACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTaa < 2:1080743/93‑1 (MQ=37) cACCCCG‑‑ACCCTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAat < 1:144886/93‑1 (MQ=37) gaccctctC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGAtgtg < 1:1057137/89‑1 (MQ=38) accctctC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGa > 2:3221743/4‑93 (MQ=255) accctctC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCGTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGa > 2:4817326/4‑93 (MQ=38) ccctctC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGat > 2:6662088/3‑93 (MQ=255) ccctctC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGat > 1:460587/3‑93 (MQ=255) ccctctC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGat > 1:4915921/3‑93 (MQ=255) ccctctC‑‑CCACAGGGAGAGGCAGCAACCACTC‑AACGCCTTCTCCTGGAGAAAGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGat < 2:5002544/91‑1 (MQ=255) cctctC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGata < 2:1403263/92‑1 (MQ=255) cctctC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGata < 1:6394929/92‑1 (MQ=255) ctctC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGatat < 1:954879/93‑1 (MQ=255) ctctC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGatat < 2:5341922/93‑1 (MQ=255) tctc‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATc > 1:3850616/1‑93 (MQ=255) tctc‑‑CCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATc < 1:6734276/93‑1 (MQ=255) c‑‑ccACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGa < 2:5605817/93‑1 (MQ=255) ccACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGaa < 2:352250/93‑1 (MQ=255) caGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTg > 2:5421667/1‑93 (MQ=255) agggagagggagAAAACACTC‑AAGGCCTTCTCTTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTgg < 1:1619664/93‑1 (MQ=255) agggagagggagAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTgg < 1:3194943/93‑1 (MQ=255) gggagagggagaAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTggg < 2:5658273/93‑1 (MQ=255) gggagagggagaAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTggg < 1:4686048/93‑1 (MQ=255) ggagagggagaAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGgt < 2:2387592/93‑1 (MQ=255) agagggagaAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGgtgt < 2:3784046/93‑1 (MQ=255) agagggagaAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGgtgt > 2:954176/1‑93 (MQ=255) agagggagaAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGgggt > 2:802087/1‑93 (MQ=255) gagggagaAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGtgtg > 1:6320243/1‑93 (MQ=255) gagggagaAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGtgtg < 2:5105686/93‑1 (MQ=255) agggagaAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGc > 1:395905/1‑93 (MQ=255) gggagaAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCa > 1:7942/1‑93 (MQ=255) gggagaAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCa > 1:5342704/1‑93 (MQ=255) ggagaAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAg > 1:2821916/1‑93 (MQ=255) ggagaAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAg > 2:6067966/1‑93 (MQ=255) ggagaAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAg > 2:2692624/1‑93 (MQ=255) gagaAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGc > 2:49266/1‑93 (MQ=255) gaAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCgg > 1:1140838/1‑93 (MQ=255) gaAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCgg > 1:3655933/1‑93 (MQ=255) gaAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCgg < 1:3136135/93‑1 (MQ=255) aaaaCACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCggg > 1:3423881/1‑93 (MQ=255) aaCACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGcc > 2:5690484/1‑93 (MQ=255) aaCACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGcc < 1:555302/93‑1 (MQ=255) cacTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCgg > 1:252033/1‑93 (MQ=255) cacTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCgg > 2:5089743/1‑93 (MQ=255) gcTC‑AAGGCCTGCTCCTGGAGAAGACCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGt < 1:1017756/92‑1 (MQ=255) acTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCggc > 1:5720467/1‑92 (MQ=255) acTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGt > 2:4499687/1‑93 (MQ=255) acTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGt < 1:6060183/93‑1 (MQ=255) acTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGt > 2:2230231/1‑93 (MQ=255) cTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGtg > 1:4790183/1‑92 (MQ=255) cTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTc > 2:2792328/1‑93 (MQ=255) cTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTc > 1:737364/1‑93 (MQ=255) cTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTc > 2:1448681/1‑93 (MQ=255) | GACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑CTCTC‑‑CCACAGGGAGAGGGAGAAAACACTC‑AA‑GCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTC > NC_000913/3957033‑3957210 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |