| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,957,560 | +C | intergenic (‑129/‑732) | ppiC ← / → rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,957,558 | 1 | . | C | 98.9% | 595.7 / ‑1.4 | 184 | intergenic (‑127/‑734) | ppiC/rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base C (73/108); total (75/109) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.13e-01 | |||||||||||
Only 100 of 203 total aligned reads displayed.
TAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑T‑G‑C‑TCGCAGGT‑C‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATG > NC_000913/3957470‑3957645 | aGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGT‑c‑cc < 1:5690484/93‑2 (MQ=255) aGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGT‑c‑cc > 1:3471567/1‑92 (MQ=255) cATGATCTGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGT‑c‑cctc > 1:6365074/1‑90 (MQ=255) aTGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGT‑c‑cctca > 2:1048148/1‑89 (MQ=255) gATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAg > 2:759493/1‑93 (MQ=255) gATCCGCAGAGGCTACCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATAGGGCAAAAGCCCGGAAAAGCCGG‑G‑CTTCGCAGGTCC‑CTCAAg < 2:3701423/93‑1 (MQ=255) aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAgg < 1:3672953/93‑1 (MQ=255) aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAgg > 1:3596757/1‑93 (MQ=255) tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAggg < 1:436999/93‑1 (MQ=255) tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAggg > 2:2592120/1‑93 (MQ=255) ccGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAgggg < 2:4565138/93‑1 (MQ=255) ccGAAGATGCTAACGTAATTGTCAGTCAGGGCGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCTAgggg < 1:4342708/93‑1 (MQ=255) cAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGgaga > 2:43565/1‑93 (MQ=255) aGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGaa < 1:2513073/93‑1 (MQ=255) aGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGaa < 2:3123872/93‑1 (MQ=255) aGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGG‑CTTCGCAGGTCC‑CTCAAGGGGAGaa < 1:1120407/93‑1 (MQ=255) gATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGaaa < 2:1386428/93‑1 (MQ=255) aTGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGaaaa > 1:1977735/1‑93 (MQ=255) tGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAAc > 1:1222638/1‑93 (MQ=255) cTACCGTAATTGTCAGTCAGGGAGTGGCTGTTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACtt < 2:1301263/93‑1 (MQ=255) aCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAgg > 2:6653436/1‑93 (MQ=255) gTAATTGTCAGTCAGGGAGTGGCTGGTACATATCTGGCAACAGCCCCGAAAATCCGG‑G‑CTTCGCAGGG‑CGCTCAAGGGGAGAAAACTTAAGGc > 1:4687706/1‑93 (MQ=255) tAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGcc > 1:4970958/1‑93 (MQ=255) tAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGcc < 2:823092/93‑1 (MQ=255) tAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGcc < 2:1515009/93‑1 (MQ=255) tAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGcc < 2:2144421/93‑1 (MQ=255) aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCctc < 1:1749241/93‑1 (MQ=255) aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCctc < 2:362953/93‑1 (MQ=255) aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCctc < 1:3218724/93‑1 (MQ=255) gtcagtcaGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTAt < 2:699866/93‑1 (MQ=255) gtcagtcaGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTAt < 2:631702/93‑1 (MQ=255) tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATg < 2:6693520/93‑1 (MQ=255) agtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATggg > 2:4210184/1‑93 (MQ=255) ggcagGGAGTGGCTGGTACATAAATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGc < 1:4158017/91‑1 (MQ=255) tcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCt > 1:1038896/1‑93 (MQ=255) cagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTa < 2:4107295/93‑1 (MQ=255) cagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTa < 2:662790/93‑1 (MQ=255) agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGGAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc > 1:6448225/1‑93 (MQ=255) agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc > 1:3840342/1‑93 (MQ=255) agGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATCC‑TGG‑CTTCGCAGGTCC‑CTCAAGGGGGGCAAACTTAGGGCCTCTATGGGCTAc > 2:3300764/1‑93 (MQ=255) ggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaa > 2:3617409/1‑93 (MQ=255) ggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGG‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaa > 2:4863574/1‑93 (MQ=255) gAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaaa < 2:5109465/93‑1 (MQ=255) gAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaaa < 2:2900909/93‑1 (MQ=255) gAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaaa < 2:2060338/93‑1 (MQ=255) gAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaaa < 2:153785/93‑1 (MQ=255) aGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAg > 2:6470103/1‑93 (MQ=255) gTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGt > 1:5409305/1‑93 (MQ=255) gTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGt < 1:4039461/93‑1 (MQ=255) gTGGCTGGGACATATATGGCAAAAGCCCGGAAAATCC‑GGG‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGt > 1:6611024/1‑93 (MQ=255) tggttggtACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTc < 1:3519071/93‑1 (MQ=255) tGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTc > 1:2157087/1‑93 (MQ=255) gCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAt > 1:4533968/1‑93 (MQ=255) gCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAt < 1:3776808/93‑1 (MQ=255) gCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAt < 1:394094/93‑1 (MQ=255) gCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAt < 1:4493661/93‑1 (MQ=255) tGGTACATATATGGCAAAAGCCGGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa < 2:6158199/93‑1 (MQ=255) tGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa < 2:1114220/93‑1 (MQ=255) tGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa < 2:2427798/93‑1 (MQ=255) tGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa > 1:5335640/1‑93 (MQ=255) tGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa < 1:4620272/93‑1 (MQ=255) ggTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt < 1:2707573/93‑1 (MQ=255) tACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCg < 2:3684660/93‑1 (MQ=255) aCATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgg < 2:4838305/93‑1 (MQ=255) cATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg < 1:5256566/93‑1 (MQ=255) cATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg > 1:6281047/1‑93 (MQ=255) cATATATGGCAAAAGCCCGGAAAATCC‑GGG‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg > 2:463073/1‑93 (MQ=255) atatatGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgggg < 1:5074007/93‑1 (MQ=255) tatatGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa > 1:4841110/1‑93 (MQ=255) tatatGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa > 2:6257079/1‑93 (MQ=255) atatGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAt < 1:1345276/93‑1 (MQ=255) atatGGCAAAAGCCCGGAAAATCC‑G‑GTCTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAt < 1:842305/93‑1 (MQ=255) tatGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATg > 2:3533155/1‑93 (MQ=255) tatGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATg < 1:2072800/93‑1 (MQ=255) atGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATgg < 1:4939403/93‑1 (MQ=255) tGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt > 2:4964314/1‑93 (MQ=255) tGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt < 2:5606876/93‑1 (MQ=255) tGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt > 2:6009949/1‑93 (MQ=255) gCAAAAGCCGGAAAAAGCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGtta < 1:5632808/93‑1 (MQ=255) cAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttat < 2:5078529/93‑1 (MQ=255) cAAAAGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttat < 2:5518218/93‑1 (MQ=255) aaaaGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatt > 2:1092067/1‑93 (MQ=255) aaaaGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatt < 2:4145970/93‑1 (MQ=255) aaaaGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatt > 1:4783063/1‑93 (MQ=255) aaaGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattt > 1:3299876/1‑93 (MQ=255) aaaGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattt > 2:1325332/1‑93 (MQ=255) aGCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttta > 1:1360503/1‑93 (MQ=255) gCCCGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat < 1:5873136/93‑1 (MQ=255) ccGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg < 2:906148/93‑1 (MQ=255) ccGGAAAATCCGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg > 1:3249338/1‑93 (MQ=255) cttCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCg < 2:1910709/91‑1 (MQ=255) cttCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCg < 2:536159/91‑1 (MQ=255) ttCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGa < 2:3217436/92‑1 (MQ=255) ttCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGa < 2:792631/92‑1 (MQ=255) tCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGat < 1:5623240/93‑1 (MQ=255) cGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGata < 1:4307193/93‑1 (MQ=255) cGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGata < 2:2223021/93‑1 (MQ=255) cGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGata < 1:2775929/93‑1 (MQ=255) cAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATg > 1:3148821/1‑93 (MQ=255) cAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATg > 2:3739243/1‑93 (MQ=255) | TAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑T‑G‑C‑TCGCAGGT‑C‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATG > NC_000913/3957470‑3957645 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |