BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	526,302	(G)_6→7	coding (3818/4281 nt)	rhsD →	RhsD

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	526,296	1	.	G	98.1%	684.3 / 4.3	212	coding (3812/4281 nt)	rhsD	RhsD
Reads supporting (aligned to +/- strand): ref base . (2/2); new base G (121/87); total (123/89)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.65e-01

Only 100 of 247 total aligned reads displayed.

GAATTTATATCAGTATCCTTTAAATCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTAC‑GGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGATGCTGCGTTAGATGCTTTGAAAGA  >  NC_000913/526204‑526383

gAATTTATATCAGTATCCTTTAAATCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTAc                                                                                           >  2:1631354/1‑93 (MQ=255)

 aaTTTATATCAGTATCCTTTAAATCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTAC‑g                                                                                         >  1:4013685/1‑93 (MQ=255)

  aTTTATATCAGTATCCTTTAAATCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTAC‑gg                                                                                        <  2:6701935/93‑1 (MQ=255)

   tttATATCAGTATCCTTTAAATCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTAC‑ggg                                                                                       >  2:5459766/1‑93 (MQ=255)

    ttATATCAGTATCCTTTAAATCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTAC‑gggg                                                                                      <  1:4381552/93‑1 (MQ=255)

    ttATATCAGTATCCTTTAAATCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTAC‑gggg                                                                                      <  1:4046096/93‑1 (MQ=255)

     tataTCAGTATCCTTTAAATCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTAC‑ggggg                                                                                     >  2:4672119/1‑93 (MQ=255)

     tataTCAGTATCCTTTAAATCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTAC‑ggggg                                                                                     <  1:295080/93‑1 (MQ=255)

      atatCAGTATCCTTTAAATCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTAC‑ggggg‑g                                                                                   <  1:3319508/93‑1 (MQ=255)

         tCAGTATCCTTTAAATCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTAC‑ggggg‑ggag                                                                                <  1:2057660/93‑4 (MQ=255)

            gTATCCTTTAAATCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGttt                                                                              >  1:694987/1‑93 (MQ=255)

            gTATCCTTTAAATCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGttt                                                                              >  1:5313983/1‑93 (MQ=255)

              aTCCTTTAAATCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTtgg                                                                            >  1:3503600/1‑92 (MQ=255)

               tCCTTTAAATCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTtgtg                                                                           >  2:4279934/1‑93 (MQ=255)

               tCCTTTAAATCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTtgtg                                                                           >  1:243541/1‑93 (MQ=255)

                ccTTTAAATCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTgtgg                                                                          >  1:5498518/1‑93 (MQ=255)

                 cTTTAAATCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTgtggt                                                                         <  2:3837550/93‑1 (MQ=255)

                 cTTTAAATCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTgtggt                                                                         >  1:2851458/1‑93 (MQ=255)

                 cTTTAAATCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGGTTgtggg                                                                         >  1:3157555/1‑92 (MQ=255)

                  tttAAATCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTgtggtg                                                                        >  1:2292533/1‑93 (MQ=255)

                  tttAAATCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTgtggtg                                                                        >  2:5375719/1‑93 (MQ=255)

                   ttAAATCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGgtgt                                                                       >  2:319528/1‑93 (MQ=255)

                     aaaTCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTc                                                                     >  2:4266895/1‑93 (MQ=255)

                     aaaTCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTc                                                                     >  2:2903656/1‑93 (MQ=255)

                       aTCCACTACAACACATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCtt                                                                   <  1:6734533/93‑1 (MQ=255)

                       aTCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCtt                                                                   >  2:646640/1‑93 (MQ=255)

                       aTCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCtt                                                                   <  1:2002279/93‑1 (MQ=255)

                       aTCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCtt                                                                   >  1:1854243/1‑93 (MQ=255)

                         ccACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTc                                                                 >  1:4195093/1‑93 (MQ=255)

                         ccACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTc                                                                 >  1:4829429/1‑93 (MQ=255)

                          cACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCa                                                                >  2:5228893/1‑93 (MQ=255)

                           aCTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCAc                                                               <  2:212600/93‑1 (MQ=255)

                           aCTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCAc                                                               >  2:2938011/1‑93 (MQ=255)

                           aCTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCAc                                                               >  2:4954895/1‑93 (MQ=255)

                            cTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACg                                                              <  1:1270635/93‑1 (MQ=255)

                            cTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACg                                                              <  1:2147952/93‑1 (MQ=255)

                             tACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGt                                                             >  1:1552780/1‑93 (MQ=255)

                             tACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGt                                                             <  1:1403270/93‑1 (MQ=255)

                              acaacaAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGta                                                            <  2:3715077/93‑1 (MQ=255)

                              acaacaAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGta                                                            >  1:5909566/1‑93 (MQ=255)

                               caacaaATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGtat                                                           >  1:4532762/1‑93 (MQ=255)

                                aacaaATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGtata                                                          <  1:6277913/93‑1 (MQ=255)

                                aacaaATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGtata                                                          >  1:2576320/1‑93 (MQ=255)

                                  caaATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTataat                                                        <  2:3997156/93‑1 (MQ=255)

                                   aaaTTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTataata                                                       <  2:344449/93‑1 (MQ=255)

                                   aaaTTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTataata                                                       <  2:5975796/93‑1 (MQ=255)

                                    aaTTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAg                                                      <  1:4679935/93‑1 (MQ=255)

                                       tGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGAc                                                   <  2:3288087/93‑1 (MQ=255)

                                        gACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGAcc                                                  >  1:6169714/1‑93 (MQ=255)

                                        gACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGAcc                                                  <  2:4005288/93‑1 (MQ=255)

                                         aCCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCa                                                 >  2:2821139/1‑93 (MQ=255)

                                         aCCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCa                                                 >  2:697360/1‑93 (MQ=255)

                                          cccTATGGTATTATTGCAGCCTGGGAATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCaa                                                <  1:6235207/93‑1 (MQ=255)

                                          cccTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCaa                                                <  2:1007413/93‑1 (MQ=255)

                                          cccTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCaa                                                >  1:3200942/1‑93 (MQ=255)

                                           ccTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAg                                               >  1:3551480/1‑93 (MQ=255)

                                           ccTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAg                                               >  2:5045186/1‑93 (MQ=255)

                                               tGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTaaa                                           <  2:4177747/93‑1 (MQ=255)

                                               tGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAACAGGACCAAGTaaa                                           >  2:391699/1‑93 (MQ=255)

                                                gggATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAAt                                          >  2:2098893/1‑93 (MQ=255)

                                                gggATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAAt                                          >  2:4482670/1‑93 (MQ=255)

                                                gggATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAAt                                          <  2:5772762/93‑1 (MQ=255)

                                                    ttattGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGa                                      >  2:5892067/1‑93 (MQ=255)

                                                     tattGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGAt                                     >  2:2448329/1‑93 (MQ=255)

                                                     tattGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGAt                                     >  2:1187517/1‑93 (MQ=255)

                                                         gCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTa                                 >  2:3938375/1‑93 (MQ=255)

                                                          cAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTAc                                <  2:5631916/93‑1 (MQ=255)

                                                            gACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTg                              >  2:2756533/1‑93 (MQ=255)

                                                            gACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTg                              >  1:4995647/1‑93 (MQ=255)

                                                             aCTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGc                             <  1:3346239/93‑1 (MQ=255)

                                                             aCTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGc                             <  1:4294229/93‑1 (MQ=255)

                                                               ttGGGATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAg                           >  2:6158334/1‑93 (MQ=255)

                                                                  ggATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGAtg                        <  1:994441/93‑1 (MQ=255)

                                                                  ggATGATGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGAtg                        <  2:1314777/93‑1 (MQ=255)

                                                                   gatgatGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGAtgc                       <  1:6050404/93‑1 (MQ=255)

                                                                   gatgatGCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGAtgc                       >  2:4221266/1‑93 (MQ=255)

                                                                    atgatgCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGAtgct                      <  1:3749191/93‑1 (MQ=255)

                                                                    atgatgCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGAtgct                      >  2:3546849/1‑93 (MQ=255)

                                                                     tgatgCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGAtgctg                     <  2:1663097/93‑1 (MQ=255)

                                                                     tgatgCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGAtgctg                     <  2:1870336/93‑1 (MQ=255)

                                                                     tgatgCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGAtgctg                     <  1:5832756/93‑1 (MQ=255)

                                                                      gatgCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGAtgctgc                    <  2:6321335/93‑1 (MQ=255)

                                                                         gCCAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGATGCTGCGtt                 <  1:5967087/93‑1 (MQ=255)

                                                                           cAGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGATGCTGCGTTAg               >  2:6077944/1‑93 (MQ=255)

                                                                            aGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGATGCTGCGTTAGa              >  2:5343960/1‑93 (MQ=255)

                                                                            aGATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGATGCTGCGTTAGa              >  2:1917342/1‑93 (MQ=255)

                                                                            aGATCTGGAGCATGTACGGGGGG‑GAGCTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGATGCTGCGTTAGa              >  1:846841/1‑93 (MQ=255)

                                                                             gATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGATGCTGCGTTAGAt             >  2:4892803/1‑93 (MQ=255)

                                                                             gATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGATGCTGCGTTAGAt             >  1:862515/1‑93 (MQ=255)

                                                                             gATCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGATGCTGCGTTAGAt             <  1:6515971/93‑1 (MQ=255)

                                                                             gATCTGGAGCATGTAC‑GGGGGAGAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGATGCTGCGTTAGAt             <  1:5156363/93‑1 (MQ=255)

                                                                              aTCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGATGCTGCGTTAGATg            <  1:5885477/93‑1 (MQ=255)

                                                                              aTCTGGAGCATGTAC‑GGGGG‑GAGTTTGCGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGATGCTGCGTTAGATGc           >  2:1236526/1‑93 (MQ=255)

                                                                               tCTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGATGCTGCGTTAGATGc           <  2:844316/93‑1 (MQ=255)

                                                                                cTGGAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGATGCTGCGTTAGATGCt          <  1:6369920/93‑1 (MQ=255)

                                                                                  ggAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGATGCTGCGTTAGATGCttt        >  1:658894/1‑93 (MQ=255)

                                                                                   gAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGATGCTGCGTTAGATGCTTTg       <  1:1100918/93‑1 (MQ=255)

                                                                                   gAGCATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGATGCTGCGTTAGATGCTTTg       >  2:78392/1‑93 (MQ=255)

                                                                                      cATGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGATGCTGCGTTAGATGCTTTgaaa    >  2:376829/1‑93 (MQ=255)

                                                                                        tGTACGGGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGATGCTGCGTTAGATGCTTTgaaaga  >  2:2329125/1‑93 (MQ=255)

GAATTTATATCAGTATCCTTTAAATCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTAC‑GGGGG‑GAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGATGCTGCGTTAGATGCTTTGAAAGA  >  NC_000913/526204‑526383

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`