BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,031,984	+C	coding (1250/1299 nt)	trkH →	TrkH

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,031,983	1	.	C	100.0%	824.6 / NA	255	A417P (GCA→CCA)	trkH	TrkH
Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (146/109); total (146/109)

Only 100 of 270 total aligned reads displayed.

TCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCG‑CACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAA  >  NC_000913/4031892‑4032070

tCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCG‑c                                                                                         >  1:3400932/1‑93 (MQ=255)

tCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCG‑c                                                                                         <  2:4397520/93‑1 (MQ=255)

   cgcACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCG‑ccac                                                                                      >  1:5193668/1‑90 (MQ=255)

   cgcACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCG‑ccac                                                                                      >  2:3122449/1‑90 (MQ=255)

    gcACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCG‑ccacg                                                                                     <  2:5841307/93‑5 (MQ=255)

    gcACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCG‑ccacg                                                                                     <  2:5369361/93‑5 (MQ=255)

      aCTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACggg                                                                                    >  1:1148640/1‑93 (MQ=255)

      aCTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACggg                                                                                    <  1:2400125/93‑1 (MQ=255)

      aCTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACggg                                                                                    >  1:5113933/1‑93 (MQ=255)

       cTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGc                                                                                   >  1:1056455/1‑93 (MQ=255)

         gCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGt                                                                                 >  1:179493/1‑93 (MQ=255)

            ggAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGa                                                                              <  1:2188111/93‑1 (MQ=255)

            ggAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGa                                                                              <  2:4813562/93‑1 (MQ=255)

             gAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGAt                                                                             <  1:4914800/93‑1 (MQ=255)

               aCGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGa                                                                           <  2:6723384/93‑1 (MQ=255)

               aCGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGa                                                                           <  2:2463723/93‑1 (MQ=255)

               aCGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGa                                                                           >  1:3362264/1‑93 (MQ=255)

                 gTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACt                                                                         >  2:4782657/1‑93 (MQ=255)

                  tATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACtt                                                                        >  2:4167131/1‑93 (MQ=255)

                   aTCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACttt                                                                       <  1:3596391/93‑1 (MQ=255)

                     ccTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTc                                                                     <  1:4152450/93‑1 (MQ=255)

                        cGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGc                                                                  >  2:3148173/1‑93 (MQ=255)

                         gAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGct                                                                 >  2:4915807/1‑92 (MQ=255)

                         gAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGcc                                                                 >  1:1408517/1‑93 (MQ=255)

                           aGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCtt                                                               <  2:2578514/93‑1 (MQ=255)

                           aGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCtt                                                               >  2:3614885/1‑93 (MQ=255)

                           aGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCtt                                                               >  1:5391922/1‑93 (MQ=255)

                           aGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCtt                                                               <  1:5644809/93‑1 (MQ=255)

                            gCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCttt                                                              >  1:3256388/1‑93 (MQ=255)

                            gCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCttt                                                              <  2:2070464/93‑1 (MQ=255)

                            gCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCttt                                                              >  1:431027/1‑93 (MQ=255)

                            gCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCttt                                                              >  2:2304727/1‑93 (MQ=255)

                            gCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCttt                                                              >  1:1882292/1‑93 (MQ=255)

                               gTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCg                                                           >  1:3736581/1‑93 (MQ=255)

                               gTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCg                                                           >  2:5879885/1‑93 (MQ=255)

                               gTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCg                                                           >  2:2942349/1‑93 (MQ=255)

                                 ttGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTc                                                         <  1:809593/93‑1 (MQ=255)

                                   ggggATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCgg                                                       <  1:8188/93‑1 (MQ=255)

                                   ggggATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCgg                                                       >  1:5539291/1‑93 (MQ=255)

                                    gggATTTTGCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGg‑t                                                     >  1:6504148/1‑93 (MQ=255)

                                     ggATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGg‑tt                                                    <  2:2539588/93‑1 (MQ=255)

                                     ggATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGg‑tt                                                    <  1:663168/93‑1 (MQ=255)

                                       aTTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGg‑ttgt                                                  >  2:3893501/1‑93 (MQ=255)

                                        tttttCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGg‑ttgtt                                                 >  1:6007746/1‑93 (MQ=255)

                                        tttttCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGg‑ttgtt                                                 <  2:413913/93‑1 (MQ=255)

                                        tttttCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGg‑ttgtt                                                 <  1:2585763/93‑1 (MQ=255)

                                        tttttCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGg‑ttgtt                                                 >  2:3753269/1‑93 (MQ=255)

                                        tttttCTCCGCCTATGCATTGGTGTTTATTGTCAGGATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGg‑ttgtt                                                 >  1:1717019/1‑93 (MQ=255)

                                          tttCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGc                                               <  1:2083567/93‑1 (MQ=255)

                                              tcCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGGCTTTGCGTCGG‑GTGTTGCGACa                                           >  1:3966495/1‑93 (MQ=255)

                                              tcCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACa                                           >  1:2872820/1‑93 (MQ=255)

                                                cGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACAtt                                         >  2:5704091/1‑93 (MQ=255)

                                                 gCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTg                                        >  1:5927388/1‑93 (MQ=255)

                                                  ccTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGa                                       >  1:938020/1‑93 (MQ=255)

                                                  ccTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGa                                       >  2:5064098/1‑93 (MQ=255)

                                                   cTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGaa                                      <  2:1596797/93‑1 (MQ=255)

                                                   cTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGaa                                      <  2:6398443/93‑1 (MQ=255)

                                                    tATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAAt                                     >  1:6162253/1‑93 (MQ=255)

                                                    tATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAAt                                     <  1:5670152/93‑1 (MQ=255)

                                                    tATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAAt                                     >  1:6587149/1‑93 (MQ=255)

                                                     aTGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATa                                    >  2:6457212/1‑93 (MQ=255)

                                                          ttGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTg                               >  2:2858879/1‑93 (MQ=255)

                                                           tGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTgg                              >  2:5406379/1‑93 (MQ=255)

                                                           tGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTgg                              <  2:1210741/93‑1 (MQ=255)

                                                           tGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTgg                              <  1:6315984/93‑1 (MQ=255)

                                                             gtgtTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTgggg                            >  2:142177/1‑93 (MQ=255)

                                                             gtgtTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTgggg                            >  1:1340913/1‑93 (MQ=255)

                                                              tgtTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGc                           <  1:1008368/93‑1 (MQ=255)

                                                               gtTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGTATAACCTGGGGcc                          >  2:3801366/1‑93 (MQ=255)

                                                                 ttATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAg                        <  2:727677/93‑1 (MQ=255)

                                                                 ttATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAg                        <  2:348615/93‑1 (MQ=255)

                                                                  tATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAgg                       >  2:2494634/1‑93 (MQ=255)

                                                                  tATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAgg                       <  1:726183/93‑1 (MQ=255)

                                                                    ttGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAGGGc                     <  1:2906688/93‑1 (MQ=255)

                                                                    ttGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAGGGc                     <  1:5318921/93‑1 (MQ=255)

                                                                    ttGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAGGGc                     <  2:1321519/93‑1 (MQ=255)

                                                                     tGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAGGGCt                    <  1:3323330/93‑1 (MQ=255)

                                                                     tGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAGGGCt                    <  2:1784578/93‑1 (MQ=255)

                                                                      gTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAGGGCtt                   >  2:5979163/1‑93 (MQ=255)

                                                                       tCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTg                  >  1:1530658/1‑93 (MQ=255)

                                                                        cAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTgg                 <  2:2146870/93‑1 (MQ=255)

                                                                        cAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTgg                 <  2:6278020/93‑1 (MQ=255)

                                                                        cAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTgg                 <  1:4366617/93‑1 (MQ=255)

                                                                          gTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCg               >  2:1691968/1‑93 (MQ=255)

                                                                          gTATGCTGGCGATTATCGCCACGGGCGTGGAAGGCTTTTTTCCCCTTGCGTCGGTTTGTTG‑GACAATGAATAACCTGGGGCCAGGGCCTTGCg               >  1:4541426/1‑93 (MQ=255)

                                                                          gTACGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCg               >  2:2678891/1‑93 (MQ=255)

                                                                           tATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGt              >  1:2668294/1‑93 (MQ=255)

                                                                             tGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTgg            >  2:4044594/1‑93 (MQ=255)

                                                                              gCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGt           <  2:458247/93‑1 (MQ=255)

                                                                              gCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGt           <  2:3982497/93‑1 (MQ=255)

                                                                               cTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGtt          >  1:2822890/1‑93 (MQ=255)

                                                                               cTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGtt          <  2:6222959/93‑1 (MQ=255)

                                                                               cTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGtt          <  2:324303/93‑1 (MQ=255)

                                                                                 ggCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGc        <  1:2926243/93‑1 (MQ=255)

                                                                                    gATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGa     <  2:6097208/93‑1 (MQ=255)

                                                                                    gATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGa     <  2:1999042/93‑1 (MQ=255)

                                                                                    gATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGa     <  2:2978118/93‑1 (MQ=255)

                                                                                      ttATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATa   >  2:5315795/1‑93 (MQ=255)

                                                                                      ttATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATa   >  1:1289737/1‑93 (MQ=255)

                                                                                       tATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATaa  >  2:334786/1‑93 (MQ=255)

TCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCG‑CACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG‑TTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAA  >  NC_000913/4031892‑4032070

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`