Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,174,548 (G)5→6 intergenic (‑160/‑102) ycfT ← / → ycfU hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,174,5431.G99.0% 644.1 / ‑1.4 200intergenic (‑155/‑107)ycfT/ycfUhypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (1/1);  new base G (111/87);  total (112/88)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01

Only 100 of 225 total aligned reads displayed.

TAATGGGTATCTGTCTGTATTGGATGATTTTTCAGATTAAGATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCTTATATACTCGTGTCTTTGCTA  >  NC_000913/1174451‑1174630
                                                                                             |                                                                                       
  aTGGGTATCTGTCTGTATTGGATGATTTTTCAGATTAAGATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACgg                                                                                       <  2:3534059/93‑1 (MQ=255)
   tGGGTATCTGTCTGTATTGGATGATTTTTCAGATTAAGATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACggg                                                                                      >  1:3207757/1‑93 (MQ=255)
   tGGGTATCTGTCTGTATTGGATGATTTTTCAGATTAAGATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACggg                                                                                      >  1:5908516/1‑93 (MQ=255)
   tGGGTATCTGTCTGTATTGGATGATTTTTCAGATTAAGATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACggg                                                                                      >  2:2838251/1‑93 (MQ=255)
      gTATCTGTCTGTATTGGATGATTTTTCAGATTAAGATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACgggggg                                                                                   >  2:5894057/1‑92 (MQ=255)
       tATCTGTCTGTATTGGATGATTTTTCAGATTAAGATCAGGCGACAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACggggggt                                                                                  >  2:4693235/1‑91 (MQ=255)
        aTCTGTCTGTATTGGATGATTTTTCAGATTAAGATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACggggggct                                                                                 <  2:3011420/93‑4 (MQ=255)
         tctgtctgTATTGGATGATTTTTCAGATTAAGATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACggggggctt                                                                                <  2:5097170/93‑5 (MQ=255)
         tctgtctgTATTGGATGATTTTTCAGATTAAGATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACggggggctt                                                                                >  2:6590954/1‑89 (MQ=255)
           tgtctgtATTGGATGATTTTTCAGATGAAGATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCtttt                                                                               <  2:3883593/93‑1 (MQ=255)
             tctgtATTGGATGATTTTTCAGATTAAGATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCa                                                                             <  2:788342/93‑1 (MQ=255)
                   ttGGATGATTTTTCAGATTAAGATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAg                                                                       >  1:3728302/1‑93 (MQ=255)
                   ttGGATGATTTTTCAGATTAAGATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAg                                                                       <  2:6430709/93‑1 (MQ=255)
                    tGGATGATTTTTCAGATTAAGATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGc                                                                      <  2:3979941/93‑1 (MQ=255)
                     ggATGATTTTTCAGATTAAGATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGcc                                                                     >  2:2929760/1‑93 (MQ=255)
                      gatgatTTTTCAGATTAAGATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGccc                                                                    >  2:4529112/1‑93 (MQ=255)
                        tgatTTTTCAGATTAAGATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTg                                                                  <  2:6698335/93‑1 (MQ=255)
                        tgatTTTTCAGATTAAGATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTg                                                                  >  1:1896625/1‑93 (MQ=255)
                        tgatTTTTCAGATTAAGATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTg                                                                  >  2:2061709/1‑93 (MQ=255)
                         gatTTTTCAGATTAAGATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGa                                                                 <  2:49746/93‑1 (MQ=255)
                          atctttCAGATTAAGATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGAc                                                                <  1:1654274/90‑1 (MQ=255)
                          atTTTTCAGATTAAGATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGAc                                                                >  1:3350582/1‑93 (MQ=255)
                          atTTTTCAGATTAAGATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGAc                                                                <  2:1815475/93‑1 (MQ=255)
                              ttCAGATTAAGATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATc                                                            >  2:1512226/1‑93 (MQ=255)
                                 aGATTAAGATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACt                                                         >  2:6203561/1‑93 (MQ=255)
                                 aGATTAAGATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACt                                                         >  2:4619554/1‑93 (MQ=255)
                                  gATTAAGATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACtt                                                        <  1:6703032/93‑1 (MQ=255)
                                   aTTAAGATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTa                                                       >  1:522336/1‑93 (MQ=255)
                                        gATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGtt                                                  <  2:3334083/93‑1 (MQ=255)
                                        gATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGtt                                                  <  2:2583578/93‑1 (MQ=255)
                                         aTCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGtta                                                 >  1:1262199/1‑92 (MQ=255)
                                          tCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCa                                                >  1:104092/1‑93 (MQ=255)
                                           cAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAg                                               <  2:4168545/93‑1 (MQ=255)
                                            aGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGTCCTGACGATCACTTACAGTTCAGa                                              >  2:3689524/1‑93 (MQ=255)
                                            aGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGa                                              <  1:3194424/93‑1 (MQ=255)
                                             ggcggcAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGAc                                             <  1:4250125/93‑1 (MQ=255)
                                             ggcggcAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGAc                                             >  2:4814189/1‑93 (MQ=255)
                                             ggcggcAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGAc                                             >  1:6619629/1‑93 (MQ=255)
                                              gcggcAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACg                                            >  2:2408731/1‑93 (MQ=255)
                                              gcggcAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACg                                            >  1:3775017/1‑93 (MQ=255)
                                              gcggcAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACg                                            <  1:3749916/93‑1 (MQ=255)
                                                ggcAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGtt                                          <  2:2512452/93‑1 (MQ=255)
                                                   aaGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTAc                                       >  1:1320936/1‑93 (MQ=255)
                                                    aGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTAcc                                      >  2:5726673/1‑93 (MQ=255)
                                                     gATTGATGATAAAACATGGCAATTTAGCCGATTGATTTGCGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTAccc                                     <  1:45007/93‑1 (MQ=255)
                                                     gATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTAccc                                     <  2:1584192/93‑1 (MQ=255)
                                                     gATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTAccc                                     >  1:147787/1‑93 (MQ=255)
                                                     gATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTAccc                                     <  1:3527300/93‑1 (MQ=255)
                                                      aTTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCa                                    <  1:2002047/93‑1 (MQ=255)
                                                      aTTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCa                                    >  1:6366067/1‑93 (MQ=255)
                                                       ttGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCAt                                   >  2:427899/1‑93 (MQ=255)
                                                       ttGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCAt                                   >  2:276231/1‑93 (MQ=255)
                                                       ttGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCAt                                   <  1:6454108/93‑1 (MQ=255)
                                                        tgatgaTAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATc                                  >  2:1018262/1‑93 (MQ=255)
                                                        tgatgaTAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATc                                  <  2:1173845/93‑1 (MQ=255)
                                                        tgatgaTAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATc                                  <  2:5389290/93‑1 (MQ=255)
                                                          atgatAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCtt                                >  1:6004988/1‑93 (MQ=255)
                                                          atgatAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCtt                                >  2:1653630/1‑93 (MQ=255)
                                                           tgatAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTg                               >  2:3792501/1‑93 (MQ=255)
                                                            gatAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGc                              <  1:3029163/93‑1 (MQ=255)
                                                            gatAAAACATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGc                              <  1:6100843/93‑1 (MQ=255)
                                                               aaaaCATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCttt                           <  1:5386527/93‑1 (MQ=255)
                                                                aaaCATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTc                          >  2:1094120/1‑93 (MQ=255)
                                                                 aaCATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCg                         >  1:4702558/1‑93 (MQ=255)
                                                                  aCATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGc                        >  1:3615619/1‑93 (MQ=255)
                                                                  aCATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGc                        >  1:246639/1‑93 (MQ=255)
                                                                  aCATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGc                        >  1:2374804/1‑93 (MQ=255)
                                                                   cATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCt                       >  2:222168/1‑93 (MQ=255)
                                                                   cATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCt                       <  2:5482923/93‑1 (MQ=255)
                                                                   cATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCt                       <  2:2235625/93‑1 (MQ=255)
                                                                   cATGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCt                       <  1:5421785/93‑1 (MQ=255)
                                                                    aTGGCAATTTAGCCTATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCtt                      <  1:994051/93‑1 (MQ=255)
                                                                    aTGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCtt                      >  2:1365105/1‑93 (MQ=255)
                                                                    aTGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCtt                      >  1:5153951/1‑93 (MQ=255)
                                                                     tGGCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCTta                     >  2:5513573/1‑93 (MQ=255)
                                                                      ggCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCTtat                    <  2:5200107/93‑1 (MQ=255)
                                                                       gCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGTCGTTTACCCATCTTGCTTTCGCTtata                   <  1:2859474/93‑1 (MQ=255)
                                                                       gCAATTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCTtata                   <  1:4419114/93‑1 (MQ=255)
                                                                         aaTTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCTtatata                 >  2:6489156/1‑93 (MQ=255)
                                                                         aaTTTAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCTtatata                 <  1:1810045/93‑1 (MQ=255)
                                                                            ttAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCTTATATACTc              <  1:755381/93‑1 (MQ=255)
                                                                             tAGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTGTCGCTTATATACTCg             >  1:266449/1‑93 (MQ=255)
                                                                              aGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCTTATATACTCgt            >  1:4956357/1‑93 (MQ=255)
                                                                              aGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCTTATATACTCgt            <  2:104209/93‑1 (MQ=255)
                                                                              aGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCTTATATACTCgt            >  2:1390923/1‑93 (MQ=255)
                                                                              aGCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCTTATATACTCgt            >  2:5296188/1‑93 (MQ=255)
                                                                               gCCGATTGATTTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCTTATATACTCgtg           <  2:3212760/93‑1 (MQ=255)
                                                                                  gattgattTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCTTATATACTCGTGTCt        >  1:2175848/1‑93 (MQ=255)
                                                                                  gattgattTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCTTATATACTCGTGTCt        >  1:2540304/1‑93 (MQ=255)
                                                                                  gattgattTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCTTATATACTCGTGTCt        <  2:4774967/93‑1 (MQ=255)
                                                                                  gattgattTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCTTATATACTCGTGTCt        >  1:410065/1‑93 (MQ=255)
                                                                                  gattgattTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCTTATATACTCGTGTCt        <  1:4120521/93‑1 (MQ=255)
                                                                                  gattgattTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCTTATATACTCGTGTCt        >  1:4618/1‑93 (MQ=255)
                                                                                   attgattTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCTTATATACTCGTGTCtt       <  1:2758994/93‑1 (MQ=255)
                                                                                   attgattTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCTTATATACTCGTGTCtt       >  1:5080218/1‑93 (MQ=255)
                                                                                     tgattTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCTTATATACTCGTGTCTTTg     >  2:865943/1‑93 (MQ=255)
                                                                                      gattTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCTTATATACTCGTGTCTTTGc    >  1:4158317/1‑93 (MQ=255)
                                                                                      gattTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCTTATATACTCGTGTCTTTGc    >  2:2022937/1‑93 (MQ=255)
                                                                                       attTACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCTTATATACTCGTGTCTTTGCt   >  2:623260/1‑93 (MQ=255)
                                                                                        tttACGGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCTTATATACTCGTGTCTTTGCTa  >  1:5680181/1‑93 (MQ=255)
                                                                                             |                                                                                       
TAATGGGTATCTGTCTGTATTGGATGATTTTTCAGATTAAGATCAGGCGGCAAGATTGATGATAAAACATGGCAATTTAGCCGATTGATTTACGGGGGCTTTTCAGATTAGCCCTGACGATCACTTACAGTTCAGACGTTTACCCATCTTGCTTTCGCTTATATACTCGTGTCTTTGCTA  >  NC_000913/1174451‑1174630

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: