BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,008,480	+A	coding (637/654 nt)	yedK →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,008,476	1	.	A	99.1%	800.9 / ‑1.1	217	coding (633/654 nt)	yedK	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (0/2); new base A (88/127); total (88/129)
Fisher's exact test for biased strand distribution p-value = 5.16e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01

Only 100 of 240 total aligned reads displayed.

AGCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑T‑AAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTA  >  NC_000913/2008384‑2008563

aGCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGt‑t                                                                                           <  2:2373595/93‑1 (MQ=255)

aGCGGTAAAGAAGCCTCAGAAATCGCGCCCAGTCGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGt‑t                                                                                           <  1:3725044/93‑1 (MQ=255)

     tAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑T‑aaaaa                                                                                     <  1:531552/93‑2 (MQ=255)

     tAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑T‑aaaaa                                                                                     <  1:3048519/93‑2 (MQ=255)

       aagaagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑T‑aaaaacc                                                                                   >  1:3646722/1‑90 (MQ=255)

       aagaagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑T‑aaaaacc                                                                                   >  1:3264005/1‑90 (MQ=255)

        agaagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑T‑aaaaacca                                                                                  <  2:4347051/93‑5 (MQ=255)

          aagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAgg                                                                                <  2:2252806/93‑1 (MQ=255)

          aagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAgg                                                                                <  1:3125566/93‑1 (MQ=255)

           agCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAggg                                                                               >  1:499864/1‑93 (MQ=255)

            gCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGgc                                                                              <  2:824399/93‑1 (MQ=255)

              cTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCGCCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGgcgc                                                                            <  1:1832615/93‑1 (MQ=255)

                cAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCgg                                                                          <  2:1923867/93‑1 (MQ=255)

                 aGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGa                                                                         >  1:889427/1‑93 (MQ=255)

                 aGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGa                                                                         <  2:773637/93‑1 (MQ=255)

                 aGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGa                                                                         <  2:3139185/93‑1 (MQ=255)

                  gAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAg                                                                        <  1:6460503/93‑1 (MQ=255)

                   aaaTCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGt                                                                       <  2:4554308/93‑1 (MQ=255)

                   aaaTCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGt                                                                       <  1:3905564/93‑1 (MQ=255)

                    aaTCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGtt                                                                      >  1:725612/1‑93 (MQ=255)

                    aaTCGCGGCCAGTGGCTGTGCTCCAGCAAACCAGGTCTCCTGGCACCCGGCATCGCGCGCGGTGGGTGATGT‑TAAAAA‑CCAGGGCGCGGAggt                                                                      >  2:3021431/1‑91 (MQ=255)

                       cgcgGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAAt                                                                   <  2:2177335/93‑1 (MQ=255)

                        gcgGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGGTAAtt                                                                  >  1:3714524/1‑93 (MQ=255)

                        ccgGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAAtt                                                                  <  1:2346939/92‑1 (MQ=255)

                         cgGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTc                                                                 <  2:3342734/93‑1 (MQ=255)

                          ggCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCa                                                                >  2:280192/1‑93 (MQ=255)

                          ggCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCa                                                                >  2:6629513/1‑93 (MQ=255)

                           gCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCaa                                                               >  2:1262352/1‑93 (MQ=255)

                              aGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCt                                                            >  1:6078345/1‑93 (MQ=255)

                              aGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCt                                                            <  2:4024559/93‑1 (MQ=255)

                               gTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTg                                                           >  1:5137456/1‑93 (MQ=255)

                                 ggCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTggt                                                         >  2:5728515/1‑91 (MQ=255)

                                    tgtgTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGa                                                      <  1:5729167/93‑1 (MQ=255)

                                    tgtgTTCCAGCAAACCAGTCCTCCTGGCACGCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTgt                                                      <  2:4268750/93‑2 (MQ=255)

                                    tgngTTCCAGCAAACCAGTTCTNCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGa                                                      <  2:5193684/93‑1 (MQ=255)

                                     gtgtTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGAt                                                     <  1:2441419/93‑1 (MQ=255)

                                     gtgtTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGAt                                                     <  1:1443555/93‑1 (MQ=255)

                                      tgtTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATa                                                    <  1:55942/93‑1 (MQ=255)

                                       tttCCAGCAAACCATTTCTCCCGGCCCCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCCCGGAGTTAATTCAACCTGTTTGATaa                                                   <  1:1359098/92‑1 (MQ=255)

                                       gtTCCAGAAAACCAGTTCTCCTGGCCCCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATaa                                                   <  1:4961615/93‑1 (MQ=255)

                                        ttCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAg                                                  <  2:6140667/93‑1 (MQ=255)

                                          ccAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGcc                                                <  1:1105218/93‑1 (MQ=255)

                                          ccAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGcc                                                <  1:809658/93‑1 (MQ=255)

                                          ccAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGcc                                                <  2:3172090/93‑1 (MQ=255)

                                          ccAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGcc                                                <  1:4286314/93‑1 (MQ=255)

                                           cAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCt                                               <  2:258787/93‑1 (MQ=255)

                                            aGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTg                                              >  1:6612633/1‑93 (MQ=255)

                                             gCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTgg                                             <  1:6356898/93‑1 (MQ=255)

                                             gCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTgg                                             <  2:1136901/93‑1 (MQ=255)

                                              cAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGga                                            <  2:5524577/93‑1 (MQ=255)

                                               aaaCCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGgag                                           <  1:1780537/93‑1 (MQ=255)

                                                aaCCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGgaga                                          >  1:5944666/1‑93 (MQ=255)

                                                  ccAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGatt                                        >  1:1536576/1‑93 (MQ=255)

                                                   cAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGatta                                       >  2:1542919/1‑93 (MQ=255)

                                                    aGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGattat                                      <  1:2403041/93‑1 (MQ=255)

                                                    aGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGattat                                      >  1:1049444/1‑93 (MQ=255)

                                                     gTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGattatt                                     >  1:2648385/1‑93 (MQ=255)

                                                     gTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGattatt                                     >  1:674319/1‑93 (MQ=255)

                                                     gTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGattatt                                     >  2:1298852/1‑93 (MQ=255)

                                                     gTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGattatt                                     <  2:1861735/93‑1 (MQ=255)

                                                     gTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGattatt                                     >  1:4529154/1‑93 (MQ=255)

                                                      ttCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTg                                    >  1:3922588/1‑93 (MQ=255)

                                                      ttCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTg                                    >  1:4377113/1‑93 (MQ=255)

                                                       tctcCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGa                                   <  2:1680727/93‑1 (MQ=255)

                                                       tctcCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGa                                   >  2:2470374/1‑93 (MQ=255)

                                                        ctcCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGAt                                  <  2:1808981/93‑1 (MQ=255)

                                                        ctcCGGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGAt                                  <  2:3912728/93‑1 (MQ=255)

                                                         tcCTGGCGCCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATc                                 <  1:3986222/93‑1 (MQ=255)

                                                         tcCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATc                                 <  1:6210121/93‑1 (MQ=255)

                                                         tcCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCATGGAGATTATTCATc                                 >  1:4649164/1‑93 (MQ=255)

                                                          ccTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATca                                <  2:6296056/93‑1 (MQ=255)

                                                            tGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGGTTGATAAGCCTGGAGATTATTGATcaac                              >  2:6527387/1‑93 (MQ=255)

                                                             ggCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATcaaca                             >  2:5648469/1‑93 (MQ=255)

                                                              gcgcccGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATcaacaa                            <  2:4114140/90‑1 (MQ=255)

                                                              gCACCCGGTATCGCGCGCGGTGGGTAATCTGA‑AAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATcaacaa                            <  1:2518513/93‑1 (MQ=255)

                                                               cACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAAt                           <  2:5418268/93‑1 (MQ=255)

                                                                aCCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGATAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATa                          >  2:1655310/1‑93 (MQ=255)

                                                                 cccGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATAc                         <  1:2795507/93‑1 (MQ=255)

                                                                   cGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTg                       >  1:3479928/1‑93 (MQ=255)

                                                                   cGGTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTg                       >  1:2189975/1‑93 (MQ=255)

                                                                   cGGTATCGCGCGCGGTGGGTAATGT‑T‑AAAACCCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTg                       <  2:4807232/93‑1 (MQ=255)

                                                                    ggTATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGc                      <  2:3485927/93‑1 (MQ=255)

                                                                      tATCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCgc                    >  2:5114208/1‑92 (MQ=255)

                                                                        tCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCa                  >  2:4085363/1‑93 (MQ=255)

                                                                        tCGCGCGCGGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCa                  >  2:4598357/1‑93 (MQ=255)

                                                                         cgcgcgcgGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCAt                 <  2:6049988/93‑1 (MQ=255)

                                                                           cgcgcgGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATaa               <  1:2563631/93‑1 (MQ=255)

                                                                           cgcgcgGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATaa               <  2:3767733/93‑1 (MQ=255)

                                                                             cgcgGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGa             >  1:762252/1‑93 (MQ=255)

                                                                               cgGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGaaa           <  1:1810592/93‑1 (MQ=255)

                                                                               cgGTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGaaa           >  1:5287933/1‑93 (MQ=255)

                                                                                ggTGGGTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAt          >  1:2166529/1‑93 (MQ=255)

                                                                                   gggTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtctc       <  1:6430055/93‑1 (MQ=255)

                                                                                   gggTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtctc       <  1:42348/93‑1 (MQ=255)

                                                                                   gggTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtctc       <  2:1066253/93‑1 (MQ=255)

                                                                                    ggTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATctct      <  1:285500/93‑1 (MQ=255)

                                                                                     gTAATGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTa     >  2:4338761/1‑93 (MQ=255)

                                                                                       aaTGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTAtt   >  2:5406547/1‑93 (MQ=255)

                                                                                        aTGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTa  >  2:2839988/1‑93 (MQ=255)

                                                                                        aTGT‑TAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTa  <  1:6141386/93‑1 (MQ=255)

AGCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑T‑AAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTA  >  NC_000913/2008384‑2008563

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`