BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,153,900	+C	coding (616/3123 nt)	yegN →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,153,897	1	.	C	100.0%	621.7 / NA	193	A205P (GCC→CCC)	yegN	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (98/95); total (98/95)

Only 100 of 219 total aligned reads displayed.

AAATCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCG‑CCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCC  >  NC_000913/2153805‑2153984

   tctcGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGCCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCG‑gcc                                                                                      >  1:320152/1‑93 (MQ=255)

    ctcGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCG‑cccc                                                                                     <  2:5702493/93‑2 (MQ=255)

     tcGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCG‑cccct                                                                                    >  2:6385021/1‑91 (MQ=255)

     tcGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCG‑cccct                                                                                    <  2:299524/93‑3 (MQ=255)

     tcGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCG‑cccct                                                                                    <  1:839459/93‑3 (MQ=255)

      cGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCG‑cccctc                                                                                   <  1:317913/93‑4 (MQ=255)

      cGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCG‑cccctc                                                                                   <  1:3716392/93‑4 (MQ=255)

       gCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCG‑cccctcg                                                                                  >  1:5841081/1‑89 (MQ=255)

         aGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGc                                                                                 >  1:4363965/1‑93 (MQ=255)

          gATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGcc                                                                                <  2:2418182/93‑1 (MQ=255)

          gATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGcc                                                                                >  1:4908547/1‑93 (MQ=255)

           aTTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCt                                                                               <  1:5103561/93‑1 (MQ=255)

            tttCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTg                                                                              <  1:5358232/93‑1 (MQ=255)

             ttCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGa                                                                             >  1:1525794/1‑93 (MQ=255)

              tCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGAc                                                                            <  1:5590409/93‑1 (MQ=255)

               ccGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGAcc                                                                           >  2:5357558/1‑93 (MQ=255)

               ccGGCCTCGGCCTGGTGACGCTCTCCGGCAGTCAGCGTCCGTCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGAcc                                                                           <  2:3271039/93‑1 (MQ=255)

                cGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCa                                                                          >  1:2431471/1‑93 (MQ=255)

                cGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCa                                                                          >  1:1361422/1‑93 (MQ=255)

                 ggCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAg                                                                         >  2:755392/1‑93 (MQ=255)

                  gCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGc                                                                        >  2:6468765/1‑93 (MQ=255)

                    gTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGa                                                                      >  1:5733628/1‑93 (MQ=255)

                       ggCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAAc                                                                   <  1:4621988/93‑1 (MQ=255)

                         ccTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCg                                                                 <  1:1421186/93‑1 (MQ=255)

                         ccTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCg                                                                 >  1:5448800/1‑93 (MQ=255)

                         ccTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCg                                                                 <  1:16129/93‑1 (MQ=255)

                           tGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTg                                                               <  2:5692886/93‑1 (MQ=255)

                            ggTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTgc                                                              >  1:3192727/1‑93 (MQ=255)

                            ggTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCACGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTgc                                                              >  1:5297780/1‑93 (MQ=255)

                             gTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTgcg                                                             >  2:2740533/1‑93 (MQ=255)

                               gACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCa                                                           >  2:1874628/1‑93 (MQ=255)

                                aCGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCAc                                                          <  2:2179983/93‑1 (MQ=255)

                                aCGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCAc                                                          >  2:346580/1‑93 (MQ=255)

                                   cTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGc                                                       <  1:1875482/93‑1 (MQ=255)

                                    tttCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGcc                                                      >  2:6581131/1‑93 (MQ=255)

                                    tttCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGcc                                                      >  1:3103563/1‑93 (MQ=255)

                                    tttCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGcc                                                      <  2:6636955/93‑1 (MQ=255)

                                      tCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCAt                                                    <  2:2488399/93‑1 (MQ=255)

                                      tCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCAt                                                    <  2:4860800/93‑1 (MQ=255)

                                      tCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCAt                                                    <  1:659203/93‑1 (MQ=255)

                                           cggTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCg                                               <  1:5143365/93‑1 (MQ=255)

                                               cAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGgcgc                                           <  1:2760800/93‑1 (MQ=255)

                                               cAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGgcgc                                           >  2:1034425/1‑93 (MQ=255)

                                                 gCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTa                                         >  1:619499/1‑93 (MQ=255)

                                                 gCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTa                                         >  2:5979963/1‑93 (MQ=255)

                                                 gCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGAGTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCAGTACCGGCGCTa                                         >  2:6729734/1‑93 (MQ=255)

                                                   gTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAAc                                       <  2:1122654/93‑1 (MQ=255)

                                                    tCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACg                                      >  1:397596/1‑93 (MQ=255)

                                                    tCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACg                                      >  1:5119905/1‑93 (MQ=255)

                                                     ccGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGt                                     <  1:599977/93‑1 (MQ=255)

                                                      cGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGtt                                    <  2:3143074/93‑1 (MQ=255)

                                                       ggCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTa                                   >  2:5433321/1‑93 (MQ=255)

                                                        gCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTaa                                  <  2:397447/93‑1 (MQ=255)

                                                        gCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTaa                                  >  2:4461597/1‑93 (MQ=255)

                                                        gCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTaa                                  <  1:4247306/93‑1 (MQ=255)

                                                         cTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAAc                                 <  1:2254776/93‑1 (MQ=255)

                                                         cTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAAc                                 >  1:1994241/1‑93 (MQ=255)

                                                         cTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAAc                                 >  2:3912816/1‑93 (MQ=255)

                                                         cTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAAc                                 <  2:3293825/93‑1 (MQ=255)

                                                          tGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACt                                >  1:877800/1‑93 (MQ=255)

                                                          tGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACt                                <  2:5627602/93‑1 (MQ=255)

                                                           gTTCGCGTCAATCTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAGCCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTc                               <  1:806231/93‑1 (MQ=255)

                                                           gTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTc                               >  1:5863438/1‑93 (MQ=255)

                                                            ttCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCg                              >  2:6094671/1‑93 (MQ=255)

                                                              cgcgTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGc                            <  1:5335326/93‑1 (MQ=255)

                                                              cgcgTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGc                            >  2:2595848/1‑93 (MQ=255)

                                                               gcgTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCa                           >  2:3661051/1‑93 (MQ=255)

                                                                 gTCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCaaa                         >  2:2835328/1‑93 (MQ=255)

                                                                  tCAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCaaaa                        >  2:2006169/1‑93 (MQ=255)

                                                                   cAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAg                       <  1:5022323/93‑1 (MQ=255)

                                                                   cAAACTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAg                       >  1:5224260/1‑93 (MQ=255)

                                                                     aaCTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAACCCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGt                     <  1:2793091/93‑1 (MQ=255)

                                                                     aaCTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAgga                     >  2:79326/1‑92 (MQ=255)

                                                                     aaCTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAgga                     >  2:4322599/1‑92 (MQ=255)

                                                                     aaCTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGt                     <  1:3490372/93‑1 (MQ=255)

                                                                     aaCTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGt                     <  1:5629551/93‑1 (MQ=255)

                                                                      aCTTAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTa                    <  1:129452/93‑1 (MQ=255)

                                                                        ttAACGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGc                  >  2:4576730/1‑93 (MQ=255)

                                                                          aaCGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCt                <  1:4700056/93‑1 (MQ=255)

                                                                          aaCGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCt                >  2:5821043/1‑93 (MQ=255)

                                                                           aCGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTc               <  2:47417/93‑1 (MQ=255)

                                                                           aCGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTc               >  2:2885291/1‑93 (MQ=255)

                                                                           aCGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTc               <  1:268848/93‑1 (MQ=255)

                                                                           aCGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTc               <  1:6328335/93‑1 (MQ=255)

                                                                            cGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCg              >  2:5269135/1‑93 (MQ=255)

                                                                            cGCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCg              <  2:2709211/93‑1 (MQ=255)

                                                                             gCTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGa             <  2:3689291/93‑1 (MQ=255)

                                                                              cTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGAc            <  2:4372085/93‑1 (MQ=255)

                                                                              cTCAGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGAc            <  2:2297459/93‑1 (MQ=255)

                                                                                 aGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGc         >  2:5096453/1‑93 (MQ=255)

                                                                                 aGGCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGc         >  1:2648757/1‑93 (MQ=255)

                                                                                  ggCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGcc        <  1:1112968/93‑1 (MQ=255)

                                                                                   gCGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGccc       >  1:6375314/1‑93 (MQ=255)

                                                                                    cGATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCt      <  1:2028281/93‑1 (MQ=255)

                                                                                     gATTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCtt     >  2:5077179/1‑93 (MQ=255)

                                                                                      aTTGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTc    <  1:3790518/93‑1 (MQ=255)

                                                                                       ttGCCGCCCCTCGGCCTGACCAGCGAACCCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTcc   <  2:3136737/93‑1 (MQ=255)

                                                                                       ttGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTcc   >  2:5917203/1‑93 (MQ=255)

                                                                                       ttGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTcc   <  2:6227725/93‑1 (MQ=255)

                                                                                        tGCCGCCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTccc  >  1:6548938/1‑93 (MQ=255)

AAATCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCG‑CCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCC  >  NC_000913/2153805‑2153984

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`